New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780524 (0.270)41 (0.510) 35/244 NT 67.1% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 19 (0.240)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCT  >  NC_000913/1209457‑1209749
                                                                                                                                                 |                                                                                                                                                   
gTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                                                                                                  <  1:1348470‑M2/149‑4 (MQ=255)
   aaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttct                                                                                                                                               <  1:457247‑M2/149‑7 (MQ=255)
         gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTGTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGACGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaa                                                                                                                                         >  1:854979‑M2/1‑137 (MQ=255)
            atttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATAGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                                                                                      >  1:65952‑M2/1‑134 (MQ=255)
                     tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATg                                                                                                                             >  1:138719/1‑149 (MQ=255)
                     tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATg                                                                                                                             >  1:212123/1‑149 (MQ=255)
                      cGGATAAGCCTATGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcga                                                                                                                            >  2:212130‑M2/1‑124 (MQ=255)
                        gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGTCACGATTGCATTTCAGCGAGCGTGTTGGCGGAGTGGATGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                          >  1:388829‑M2/1‑122 (MQ=255)
                         aTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCAAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagag                                                                                                                         >  1:1376650‑M2/1‑121 (MQ=255)
                                   gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                                                                                               <  2:422485‑M2/149‑39 (MQ=255)
                                     cAGTTCCGGGTATTCTTCCGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGCACCGGGACACCCCCAGGTAATGCCGAGccttctgccaaaccaaggttttcgagagccgtttgcaccg                                                                                                             <  2:1482087‑M2/149‑41 (MQ=255)
                                      agatCCGGGTAGTCTTCAGCAGAAAAAGCGGCACCATAGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                            <  1:75882/146‑1 (MQ=255)
                                            gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGCAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatc                                                                                                      <  2:918458‑M2/149‑48 (MQ=255)
                                              gTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                                                                                    <  1:792096‑M2/149‑50 (MQ=255)
                                                  tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgagtt                                                                                                <  1:35974‑M2/149‑54 (MQ=255)
                                                   cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgagtgg                                                                                               <  1:873978‑M2/149‑55 (MQ=255)
                                                    ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGACCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccatcgttttcgagagccgtttgcacagtgcaatccgatttgt                                                                                              <  1:1389077‑M2/149‑56 (MQ=255)
                                                        gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCATGGTGGCGGAGTGGCTGAAGGCCAAGGAACCGTGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAAGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                          <  1:1398007/149‑1 (MQ=255)
                                                               aagcctcACTATTGAATTTCAGAGAGCCTGTTGGCGGAGTTGCTGAAGGCCACGGAACGTGGACACCAACATGTAATGCAGAGCCTTCTCACAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGTCATCATTCCTGCtttt                                                                                   <  2:1447321/143‑1 (MQ=255)
                                                               aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                                                                                   >  1:435243‑M2/1‑83 (MQ=255)
                                                                aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGGCAGCATTCCTGCTTTTa                                                                                  >  1:295600/1‑149 (MQ=255)
                                                                 gCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaaagt                                                                                 <  1:268525‑M2/149‑69 (MQ=255)
                                                                   ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGCCACCACCAGGTAATGCAGCGccttctcccacaccaaggttttcgagagccggtagcacagtgccctccgctttgataacgccccacggat                                                                               <  1:172040‑M2/149‑71 (MQ=255)
                                                                    gCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaacccaagcttttcgagagccgtttgcacagtgccatccgatttgatatcgccaatcggatt                                                                              <  1:283853‑M2/149‑72 (MQ=255)
                                                                      aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct                                                                            <  2:1480636‑M2/149‑74 (MQ=255)
                                                                       ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                           >  2:48266‑M2/1‑75 (MQ=255)
                                                                          ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                        >  1:1168142/1‑149 (MQ=255)
                                                                          ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                        <  1:744377/149‑1 (MQ=255)
                                                                             cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                     >  1:405943/1‑149 (MQ=255)
                                                                              aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                                                    <  2:635942/149‑1 (MQ=255)
                                                                               tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                   <  2:1239198/149‑1 (MQ=255)
                                                                                    gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgagttgatatcgccaaacggattcttgcggcttaacagc                                                              <  2:600953‑M2/149‑88 (MQ=255)
                                                                                    gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                                                              >  2:643352/1‑149 (MQ=255)
                                                                                                 cGGAGTGGCAGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatacgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtg                                                 <  2:506268‑M2/149‑101 (MQ=255)
                                                                                                       ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                           >  1:885351‑M2/1‑43 (MQ=255)
                                                                                                       ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccatctcccaaaccaaggttttcgagagccgtttgcacagtgccaaccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaa                                           >  1:432375‑M2/1‑43 (MQ=255)
                                                                                                        gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagctgtttgcacagtgccatccgatttgatatcgccatacggattcttgcggcttaacagcagcgcgcgcagtgcggtaag                                          <  2:1360618‑M2/149‑108 (MQ=255)
                                                                                                        gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggttag                                          <  2:602212‑M2/149‑108 (MQ=255)
                                                                                                          tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcggctttacagcagcgcgcgaagtgcggtaagta                                        <  2:627626‑M2/149‑110 (MQ=255)
                                                                                                          tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagta                                        <  2:214771‑M2/149‑110 (MQ=255)
                                                                                                          tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCACGGGGATTTAACATGCTTATTGGCTATGTAAGCGTATca                                        >  1:975794/1‑149 (MQ=255)
                                                                                                           taagGCCACGGAACCGGGACACCAACAGGTATTGCAGAGccttctcccaaactaaggtattcgatagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgctaagtgcggtaagtaa                                       >  2:724685‑M2/2‑39 (MQ=255)
                                                                                                           gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa                                       >  1:616175‑M2/1‑39 (MQ=255)
                                                                                                           gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaa                                       <  2:1393806‑M2/149‑111 (MQ=255)
                                                                                                            aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaac                                      >  1:1480636‑M2/1‑38 (MQ=255)
                                                                                                             aGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttcgcccacaccaagcgtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaact                                     >  1:918458‑M2/1‑37 (MQ=255)
                                                                                                               gCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactgg                                   >  1:254851‑M2/1‑35 (MQ=255)
                                                                                                                  aCGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                >  1:1201172/1‑149 (MQ=255)
                                                                                                                   cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgt                               <  2:98204‑M2/149‑119 (MQ=255)
                                                                                                                       aCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgggaagtaactggtcgtgccg                           <  1:1085154‑M2/149‑123 (MQ=255)
                                                                                                                        ccGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgc                          <  1:878611‑M2/149‑124 (MQ=255)
                                                                                                                        ccGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcga                                                     <  1:532852‑M2/122‑97 (MQ=255)
                                                                                                                        ccGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcga                                                     >  2:532852‑M2/1‑26 (MQ=255)
                                                                                                                        ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATAAACAAATGACCAGaa                          <  2:405943/149‑1 (MQ=255)
                                                                                                                              cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAGTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGa                    <  2:138719/149‑1 (MQ=255)
                                                                                                                               acCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                   <  2:212123/149‑1 (MQ=255)
                                                                                                                                ccAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc                  >  2:1348470‑M2/1‑18 (MQ=255)
                                                                                                                                 cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCt                 >  1:1000696/1‑149 (MQ=255)
                                                                                                                                  aaCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcca                <  1:604532‑M2/149‑134 (MQ=255)
                                                                                                                                   aCAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag               <  1:211052‑M2/149‑135 (MQ=255)
                                                                                                                                    cAGGTAATGCAGAGccttctcccaaacctaggttttcgagagccgtttgcacagttccatccgatttgatatcgccaaacggattcatgcggcgtaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttatcctgg              <  2:1339117‑M2/149‑136 (MQ=255)
                                                                                                                                      ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggct            <  2:791235‑M2/149‑138 (MQ=255)
                                                                                                                                        tAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGCTTTTACATGCTTATTGGCTATGTACGCGTATAAACAAATGACCAGAACACAGATCTACAACGt          >  2:477272/1‑149 (MQ=255)
                                                                                                                                        gaatGCAGAGccttctcccaaaccaaggttttcgagaggcgtttgcacagtgccatccgatttgatatcgccaaacggattcttgccgcttaacagccgcgcgcgatgtgcggtaagtaactggtcgtgccgccgctgcaccaggctgg          <  2:114243‑M2/148‑140 (MQ=255)
                                                                                                                                             cAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccg     <  2:348849‑M2/149‑145 (MQ=255)
                                                                                                                                              agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg    >  1:105736/1‑149 (MQ=255)
                                                                                                                                               gagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcgc   >  2:611591/1‑149 (MQ=255)
                                                                                                                                                cgccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat  >  1:98204‑M2/2‑2 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
GTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCT  >  NC_000913/1209457‑1209749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.