New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3700159122 (1.350)7 (0.080) 5/264 NT 5.5% noncoding (24/66 nt) rdlD sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD
?NC_000913 = 3700189 124 (1.430)noncoding (54/66 nt) rdlD sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD

Only 100 of 145 total aligned reads displayed.

CGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCATTGCGCGAT  >  NC_000913/3700043‑3700333
                                                                                                                                                  |                                                                                                                                                
cGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTATTGAGTGTTCTAGAGTCAAGAATAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcg                                                                                                                                                <  2:311074‑M2/149‑3 (MQ=255)
 gcgaaaTCATGCCAGAAGGCCCTGCCCACCTCTGCGAACGTCATATAGCCGCCTGTTTTGAAATGACAACCTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTACCCCCCGTTGTGTTGTCAGGTGCATAACTGCAACGTCCgg                                                                                                                                               >  2:814452/4‑149 (MQ=255)
 gCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGTGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgg                                                                                                                                               <  1:1534803‑M2/149‑4 (MQ=255)
 gCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgg                                                                                                                                               <  1:409897‑M2/149‑4 (MQ=255)
 gCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgg                                                                                                                                               >  1:636175‑M2/1‑146 (MQ=255)
  cTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcggg                                                                                                                                              <  2:720607‑M2/149‑5 (MQ=255)
   tAAATCATGCCAGAAGGCCATGCCCAGCGCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgggg                                                                                                                                             >  2:172406‑M2/1‑144 (MQ=255)
       tCATGCCAGAAGGCCATGCCCAGCTCTGCTAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGATATTCTTGACTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGttt                                                                                                                                         >  2:589287/1‑149 (MQ=255)
       tCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGttt                                                                                                                                         >  2:937187/1‑149 (MQ=255)
        cATGCCAGAAGGCCATGCCCAGCGCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGtttt                                                                                                                                        <  1:654261/149‑1 (MQ=255)
          tGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGTTGAATACCTGCAACGTGCGGGGGTTTtct                                                                                                                                      >  2:218145/1‑149 (MQ=255)
          tGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtct                                                                                                                                      <  2:317342/149‑1 (MQ=255)
          tGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtct                                                                                                                                      <  2:1252797/149‑1 (MQ=255)
           gCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtctc                                                                                                                                     >  1:734572/1‑149 (MQ=255)
             cataaGGCCAAGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtctctc                                                                                                                                   <  2:1187732/146‑1 (MQ=255)
             cAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCGCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtctctc                                                                                                                                   >  1:23318/1‑149 (MQ=255)
             cAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtctctc                                                                                                                                   >  2:1423002/1‑149 (MQ=255)
                 cggCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCa                                                                                                                               <  1:964678/148‑1 (MQ=255)
                    ccATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTtctctc                                                                                                                                   <  1:1066258/142‑1 (MQ=255)
                    ccATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTGTtctctc                                                                                                                                   >  2:1066258/1‑142 (MQ=255)
                     cATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCaa                                                                                                                           >  1:1017425/1‑149 (MQ=255)
                     cATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCaa                                                                                                                           <  2:1138600/149‑1 (MQ=255)
                     cATGACCAGCTCTGCGAACGTCATATTGCCGCCTGTGTTGTAATGACAACGTATCTCGGCTATTCTTGAGTGGTCTAGATTCAAGATTAGCCCCCGTGGGGTTGTAAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCaa                                                                                                                           <  2:363098/149‑1 (MQ=255)
                      ccgCCCCGCTCGCCGAACGCCCTAAACCCGCCTCCGTCCCAATCACAACGCCTCGCGTCTACTCTACAGTGCACTAGAGCCAACCTTACCCCCCTTCGAGCTCTCAGGTGCATACCTGCAACGAGCGGGGGTTTTCTCTCTCCAGCAAc                                                                                                                          <  2:1008747/147‑1 (MQ=255)
                        gCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGGTTTCTCTCTCCAGCAACCa                                                                                                                        >  2:1197262/1‑149 (MQ=255)
                        gCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGGTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGAACCCCTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGAAAcaa                                                                                                                        >  1:1303986/1‑147 (MQ=37)
                         cccAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCaa                                                                                                                       <  1:367064/149‑1 (MQ=255)
                          ccAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAAt                                                                                                                      <  2:369273/149‑1 (MQ=255)
                          ccAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAAt                                                                                                                      <  1:792628/149‑1 (MQ=255)
                             gCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGcc                                                                                                                   >  2:1210440/1‑149 (MQ=255)
                             gCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGcc                                                                                                                   >  2:972449/1‑149 (MQ=255)
                                   cGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAgg                                                                                                             >  2:1261866/1‑149 (MQ=255)
                                      aCGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCAATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGAt                                                                                                          <  1:574234/149‑1 (MQ=255)
                                         tCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTGTTGAGTGGTCTAGTTTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATaaa                                                                                                       <  1:1138085/149‑1 (MQ=255)
                                            tataGCCGCCTGTGTGGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGcc                                                                                                    <  1:776311/149‑1 (MQ=255)
                                              taGCCGCCTGTGTTGTAATGACAACGTTTCGCTGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGcccc                                                                                                  >  2:87870/1‑149 (MQ=255)
                                               aGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCGCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGccccc                                                                                                 <  2:23318/149‑1 (MQ=255)
                                                 ccgccTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGc                                                                                               >  1:58654/1‑149 (MQ=255)
                                                   gccTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCGACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCaa                                                                                             >  1:579896/1‑149 (MQ=255)
                                                   gccTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGAGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCaa                                                                                             >  2:485170/1‑149 (MQ=255)
                                                      tgtgTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACAt                                                                                          >  2:502037/1‑149 (MQ=255)
                                                          ttgtAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCTGGTGCATACCTGCATCGTGCGGGGGGTTTCTCTCTCCAGGAACAAATGCGAGCAGGGATAAAGCGACGGCAACAGTgcg                                                                                      >  1:1564118/1‑149 (MQ=255)
                                                          ttgtAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTgcc                                                                                      >  2:1529938/1‑148 (MQ=255)
                                                           tttAATGCCTAAGTTTCGCGGGTATTCTGTCGTGGTATAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTgcgc                                                                                     <  2:877544/147‑1 (MQ=18)
                                                           tgtAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTgcgc                                                                                     <  1:821806/149‑1 (MQ=255)
                                                           tgtAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTgcgc                                                                                     <  1:840859/149‑1 (MQ=255)
                                                              aaTGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTc                                                                                  >  1:1430756/1‑149 (MQ=255)
                                                               aTGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCa                                                                                 <  1:699789/149‑1 (MQ=255)
                                                                 gACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCACCATTGCGCCTCagc                                                                               >  1:1306351/1‑147 (MQ=255)
                                                                    aaCGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCACCCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGa                                                                            >  2:202995/1‑149 (MQ=255)
                                                                     aCGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGaa                                                                           <  2:540364/149‑1 (MQ=255)
                                                                     aCGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGaa                                                                           <  1:1261866/149‑1 (MQ=255)
                                                                      cGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAAc                                                                          <  2:660118/149‑1 (MQ=255)
                                                                      cGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAAc                                                                          <  2:809052/149‑1 (MQ=255)
                                                                          tCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCttt                                                                      <  1:992850/149‑1 (MQ=255)
                                                                             cgGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCg                                                                   <  2:1228184/149‑1 (MQ=255)
                                                                               gCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGc                                                                 <  1:369897/149‑1 (MQ=255)
                                                                               gCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCACACGTGGAGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAAAGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGc                                                                 <  2:316351/149‑1 (MQ=255)
                                                                                cTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAAACAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCt                                                                >  2:438125/1‑149 (MQ=255)
                                                                                    tCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTCGTGTTGTCAGCTGCATACCTGCAACGTGCGGGGGTATTCTCTCACCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCCGCTTGcc                                                            >  1:1092580/1‑149 (MQ=21)
                                                                                      ttGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGc                                                          <  1:1544194/149‑1 (MQ=255)
                                                                                           tGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcggggggtaatcttgactcttgaccactgaagaatagccgcgaaacgttgtcattacaacacaggcgggtatatgacgttcgcagaggtgggc                                                     <  1:180854‑M2/149‑94 (MQ=255)
                                                                                             gTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGAAACATTGCGCCTCCCCGGAACCTTTCCGGCTTGCCGCTGATTCt                                                   >  2:956338/1‑149 (MQ=255)
                                                                                               cTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTAc                                                 <  1:435112/149‑1 (MQ=255)
                                                                                               cTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTAc                                                 <  1:1423002/149‑1 (MQ=255)
                                                                                               cTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGAAACGTGCGGGGGTATTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTACCGCCTTGCCGCTGAtactac                                                 >  1:798574/1‑149 (MQ=21)
                                                                                                tAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACg                                                >  1:434317/1‑149 (MQ=255)
                                                                                                 agagTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGa                                               >  1:902359/1‑149 (MQ=255)
                                                                                                   agTCAAGATTAGCCCCCGTGGTGTTGTGAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGAtt                                             <  2:30170/149‑1 (MQ=255)
                                                                                                     tCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGc                                           >  1:775038/1‑149 (MQ=255)
                                                                                                     tCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGc                                           >  1:1563939/1‑149 (MQ=255)
                                                                                                     gcAAGATTATCCCCCGTGGTGTTGTCATGTGCATACCTGCAACGTGCGGGGGTTTTCTCTGTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGc                                           <  2:659401/148‑1 (MQ=255)
                                                                                                       aaGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCtt                                         <  1:972449/149‑1 (MQ=255)
                                                                                                       aaGATTAGCCCACGTGGTGTTGTCATGTGCATACCTGAAACGTTCGGGGGTTTTCTATCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACTTTGCGCAGCACAGGAACCTGTCAGGATTGCCTCTGATTCTTCgcttgctt                                         >  2:280683/1‑149 (MQ=21)
                                                                                                       aaGATTAGCCACCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCACCCAATGCCCCCCGGGATAAAGCCCCCGCTACATTGCGCCTCCCCGGAGCCTTGCCGGCTGGCCGCTGCGTCTACGATGGCtt                                         >  2:280686/1‑149 (MQ=255)
                                                                                                        aGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgggggctaatcttgactctagaccactcaagaatagccgcgaaacgttgtcattacaacaccggcggctatatgacgttcgcagagctgggcatggccatctggc                                        <  2:1185244‑M2/149‑107 (MQ=255)
                                                                                                        aGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCttt                                        <  2:409897/149‑1 (MQ=255)
                                                                                                         gagtAGCCGCCGTGGTGTTGTAAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCtttt                                       <  2:414677/146‑1 (MQ=255)
                                                                                                         gATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCtttt                                       <  2:414679/149‑1 (MQ=255)
                                                                                                          aTTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCttttt                                      >  1:803827/1‑149 (MQ=255)
                                                                                                           ttAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTa                                     <  2:93026/149‑1 (MQ=255)
                                                                                                             aGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACt                                   <  1:522099/149‑1 (MQ=255)
                                                                                                               cccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGt                                 <  2:605507/149‑1 (MQ=255)
                                                                                                               cccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGt                                 <  1:317109/149‑1 (MQ=255)
                                                                                                                ccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgggggctaatcttgactctagaccactcaagaatagccgcgaaacgttgtcattacaacacaggcggctatatgacgttcgcagagctgggcatggccttctggcatgatttt                                <  1:1415551‑M2/149‑115 (MQ=255)
                                                                                                                ccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgggggctaatcttgactctagaccactcaagaatagccgcgaaacgttgtcattacaacacaggcggctatatgacgttcgcagagctgggcatggccttctggcatgattta                                <  1:604088‑M2/149‑115 (MQ=255)
                                                                                                                ccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCTGGGGTTTTCTCTCTCCAGCAAACAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTc                                <  2:1303986/149‑1 (MQ=255)
                                                                                                                ccccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCTCCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTc                                <  2:2494/149‑1 (MQ=255)
                                                                                                                 cccGTGGTGTTGTCAGGTGCATACCTGCAACGTGcgggggctaatcttgactctagaccactcaagaatagccgcgaaacgttgtcattaccacacaggcggctatatgacgttcgcagagctgggcatggccttctggcatgattttg                               <  1:960221‑M2/149‑116 (MQ=255)
                                                                                                                 cccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCa                               <  1:942514/149‑1 (MQ=255)
                                                                                                                  ccGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAg                              <  1:252034/149‑1 (MQ=255)
                                                                                                                    gtggtgTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCa                            <  1:936927/149‑1 (MQ=255)
                                                                                                                             tCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTTCGCGTCACCGGAGCCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTAAGCACCCGGCagt                   >  1:1110272/1‑147 (MQ=255)
                                                                                                                                     aTACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCa           <  2:1534803/149‑1 (MQ=255)
                                                                                                                                     aTACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGCGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCAGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCa           >  1:307507/1‑149 (MQ=255)
                                                                                                                                      tACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCAt          >  1:495414/1‑149 (MQ=255)
                                                                                                                                       aCCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCATCCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCAtt         >  1:209189/1‑149 (MQ=255)
                                                                                                                                       aCCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCTCCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCttt         <  1:660998/149‑1 (MQ=255)
                                                                                                                                         cTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCCCCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAAGCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAAGCTTCCTCAATgc       >  1:891908/1‑149 (MQ=255)
                                                                                                                                         cTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCTCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCATTgc       >  1:119727/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
CGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCTCTCTCCAGCAACCAATGCCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATTGCTTTTTACTGTCAGCACCCGGCAATCTTCCTCATTGCGCGAT  >  NC_000913/3700043‑3700333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.