| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,731,581 | G→T | 8.5% | intergenic (‑424/+19) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,731,581 | 0 | G | T | 8.5% | 205.0 / 6.9 | 85 | intergenic (‑424/+19) | rrsG/clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| Reads supporting (aligned to +/- strand): ref base G (37/39); new base T (6/2); total (44/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCAGAGGA > NC_000913/2731433‑2731729 | gttgttCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCg < 1:159034/149‑1 (MQ=255)gttgttCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCg < 1:397348/149‑1 (MQ=255) cGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCt > 2:837269/1‑149 (MQ=255) tCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAATCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGtt < 2:824292/149‑1 (MQ=255) cAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAAAATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCTTCGGGGCTCGttt < 1:1478617/149‑1 (MQ=39) cgtggtgGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGtttt < 2:1072307/148‑1 (MQ=255) aGTGGTGGCGCATTATAGTGAGTTATTCTTGCCTGACATGCGAAATATATAAAAACTTTATCGTTCGCTAAATTTTCATTCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATATACATAAACGAGCCCCGAAGTGCTCGtttt < 2:560763/149‑1 (MQ=255) aGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGTAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCTTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGtttt > 2:539013/1‑149 (MQ=255) aGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGtttt < 1:806472/149‑1 (MQ=255) gtggtgGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTATCAGGCAAAACATCTTAAATATAGTCTTTTCCGTAAAACTTATAGACAAAAACGAGCCCCGAAGGCCTCGTTTTa > 2:1489650/1‑149 (MQ=255) tggtggCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCACGAAGGGCTCGTTTTAt > 1:1243089/1‑149 (MQ=255) gcATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAATAACGAGCCCCGAAGGGCTCGTTTTATCATTTAc > 2:190122/1‑149 (MQ=255) gcATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTAc < 1:1542482/149‑1 (MQ=255) gcATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCGAACTTATAGACAAAAACGAGCCCCGACGGGCTCGTGTTATCATTTAc > 2:1131194/1‑149 (MQ=255) gcATTATAGGGAGTTATTCAGGCATGACAATCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACTAGCCCCGAAGGGCTCGTTTTATCATTTAc < 2:582665/149‑1 (MQ=255) cATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACt < 1:216467/149‑1 (MQ=255) cATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAAATTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACt < 1:1041088/149‑1 (MQ=255) aTTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGTCAAAACATATTAAATTTAGTCTTTTCAGTCTACCTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTAATg > 2:850228/1‑149 (MQ=255) ataGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTCTTATCATTTACTGGAc < 1:222108/149‑1 (MQ=255) taGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTGTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGATCCACGAAGGGCTCGTTTTATCCTTTCCTGGACg > 2:381241/1‑149 (MQ=255) ggAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCg > 2:906686/1‑149 (MQ=255) taGTTATTTCGGCCTGAGAATGTAAAAATATAAACACTTTATCGTTCGCTCACTTTTCATGCAAAACATCTTAAATTTAGTCTTTTCCGTCTAACTTATATACAAAAACGAGCCCCGAATGGCTCGTTTTATGATTTACTGGACGGCGa < 2:104658/148‑1 (MQ=255) gAGTTATTCCGGCCTGACAAGCGTAAAATATAAAAAATTTATCGGTCTCTAACTTTTCAGTCAAAACATCTTAAATATACTCTTTTTGGGCTTACTTTTAGACAATAACGAGCCCCGATGTGCTCGTTTTATCATTTTCTGGACGGCGa < 1:1015722/149‑1 (MQ=255) aGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGAc < 1:30761/149‑1 (MQ=255) aTTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTAATGGACGGCGACAATc > 1:1529232/1‑149 (MQ=255) ttCCGGCCTGACAAGCGAAAAATATAAACACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATTGTCTGTTCCGGCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACATTcc > 2:1094801/1‑149 (MQ=255) ttCCGGCCTGACAAGCGAAAAATATAAAACCTTTATCGTTCGCTCCCTGTTCCGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCTAAGGGAGAGTTTTATCATTTACTGGCAGGCTACAAGcc > 2:1100519/1‑149 (MQ=255) ttCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATcc < 2:807103/149‑1 (MQ=255) tCCGGCCTGACTAGCGAAAAATATAATAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTTAATATTGTCTTTTCCGTCTTATTTATAGACAAAAACCAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCg < 1:1374882/149‑1 (MQ=255) tCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCATGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGTGCTCGTTTTATCATTTACTGGACGGCGACAATCCg < 1:474087/149‑1 (MQ=255) gCCTGACAAGCGAAAAATATAAAAACTTTATAGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCt < 2:882288/149‑1 (MQ=255) cttaCAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTATCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAACCGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTc < 2:1506315/146‑1 (MQ=255) gACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCAt > 1:404091/1‑149 (MQ=255) gACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCAt > 2:1172311/1‑149 (MQ=255) aGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCATGCAAAACATATTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAAc < 2:970082/149‑1 (MQ=255) gCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACt > 1:762697/1‑149 (MQ=255) gCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCCGTCTTCATTAACt > 1:807029/1‑149 (MQ=255) gAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTc > 2:79707/1‑149 (MQ=255) aaTATAACAACTTTATCGTTCGCTCACTTATCAGTCAAAACATCTTAAATATAGTCTTTTACGTATAACTTATATACAAAAACGAGCCCCGAAGTGCTCGTTTTATCATTTACTGGACGGCGACAATGCGGTCTTCATTAACTTCCAgg < 2:525252/149‑1 (MQ=255) aaaaaCTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAAt > 1:1316184/1‑149 (MQ=255) aaaaaCTTTATCGTTCGCTCACGTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACCAGCCCCCAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGaaa > 1:981414/1‑148 (MQ=255) cTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACTGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACtt > 2:837562/1‑149 (MQ=255) tttATCGTTCGCTCAATTTTCAGGCAAAACTTCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCTAAGGGCTCGTTTTATCATTTAGTGGACGGAGACATTCCGGTCTTCATTAACTTCCAGGCGAATCACttt < 2:366828/149‑1 (MQ=255) ttATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGTGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTa > 2:339254/1‑149 (MQ=255) cGTTCGCTCACTTTTCAGGCAAAACATCTTAAAAATCGTCTTTTCCGTCTAACTTATAGACAAAAACGCGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGGCTTCATTAACTTCCAGGCGAATCACTTTACCCg < 1:1553422/149‑1 (MQ=255) ttCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGa > 2:775683/1‑149 (MQ=255) tCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGaa < 1:837269/149‑1 (MQ=255) cGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAAc < 1:978050/149‑1 (MQ=255) cGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGACCCCCGACTGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAAc < 1:1428466/149‑1 (MQ=255) cACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAAt < 2:1118400/149‑1 (MQ=255) aCTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAAtt > 1:76659/1‑149 (MQ=255) tttCAGGCAACACATCTTAAATATAGTCTTTTCCGTCTAACTTTTAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGGCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCAc < 2:1535995/149‑1 (MQ=255) aaaaCATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGt > 2:770118/1‑149 (MQ=255) aTCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTg < 1:457327/149‑1 (MQ=255) ttAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCtg < 2:106079/149‑1 (MQ=255) tAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCACGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCtgt < 1:294606/149‑1 (MQ=255) ttCTTTTCAGTCTAACTTATAGACAAAATCGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTCCCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCgg < 1:850228/148‑1 (MQ=255) gTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCgg < 2:404091/149‑1 (MQ=255) tCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTGTTATCATTTACTCGCCGGCGCCAAACCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCggg > 1:869148/1‑149 (MQ=255) tCTTTTCCGGCTAACTTATAGACAAAAACGCGCCCCGAAGGGCTCGTTTTATCATTTAATGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGAATTTGCTGTGCCAGCggg < 2:1289102/149‑1 (MQ=255) ttttCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGCCAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCCGACAGTATTTGCTGTGCCAGCGGGtt > 1:1412209/1‑149 (MQ=255) ttttCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATAACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGtt > 1:56686/1‑149 (MQ=255) ttCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCTGGtttt < 1:1363107/149‑1 (MQ=255) tCCGTCTAACTTATAGACAAAACCGAGCCCCGAAGGGCTCGTTTTATCAATTACTGGACGGCGACAATCCGGTCATCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTc < 2:346311/149‑1 (MQ=255) tCCGTCTAACTAATAGACAAAAACGAGCACCGAAGGGCGAGTTTTATCATTTACTGGACGGAGACAATCCGGTCTTCATTAACTTGCAGGCGAATCACTTTACCCGGAACCAATTCAGCAGACAGTATTTGCTGTGCCAGCGGGTTTTc < 1:1489650/149‑1 (MQ=255) gTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGAt > 2:778380/1‑149 (MQ=255) tCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAAATTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATc > 2:355487/1‑149 (MQ=255) tAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctg > 2:241946/1‑149 (MQ=255) tAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctg > 2:967517/1‑149 (MQ=255) tAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGAAAATCCGGTCTTAATTAACTTCAATGCGAATCACTTTACCCGGAACCAATTAACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctg > 2:622037/1‑149 (MQ=255) aaCTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctgc < 2:805353/149‑1 (MQ=255) cTTATAGACAAAAACGAGCCCCGAAGGGCGCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGACCCAATTCACCAGACAGTATTTGCTGGGCCAGCGGGTGTTCGCTctgctg > 1:1529693/1‑149 (MQ=255) ttATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctgctgc > 1:587706/1‑149 (MQ=255) tctcAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCATTTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATctgctgctgta < 1:327575/146‑3 (MQ=255) ataaaaCGAGCCCTTCGGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTGTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTg > 1:426744/3‑149 (MQ=255) ataaaaCGAGCCCTTCGGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCGCTTTACCCGGAACCAATTCACAAGACAGTATTTGCTGTGCCAGGGGGTTTTCGATCTGGTGCTGAATTg > 1:418322/3‑149 (MQ=255) aaaaaCGAGCACCGAAGGGCTCGTTTTATCATTTACTGTACGGCGACAATCCGCTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGAATTTGCTGTGCCAGCGGGGTTTCGATCTGCTGCTGAAtaga > 2:327575/1‑146 (MQ=255) aaaaCGAGCCCTTCGGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGACTCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTgaa > 1:1512614/1‑147 (MQ=255) aaCGAGCCCTTCGGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACg > 1:224292/1‑149 (MQ=255) aaCGAGCCCTTCGGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACg > 1:1288449/1‑149 (MQ=255) aaCGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACg > 1:1263176/1‑149 (MQ=255) gAGCCCCGAATGGCTCGTTTTATCATTTACTTGACTGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGttt < 2:56686/149‑1 (MQ=255) gCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCa < 1:906686/149‑1 (MQ=255) ccccGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCag < 2:1316184/149‑1 (MQ=255) ccccGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAAATCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCag > 1:453043/1‑149 (MQ=255) cccGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCaga > 1:973875/1‑149 (MQ=255) cGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCCGGTTTTCGATCTGCTGCTGAATTGCACGTTTCAGAgg > 1:1408593/1‑149 (MQ=255) gAAGGGCTCGTTTTATCATTTACTGGACGGCGCCAATCCGGTCTTCATTAACTGCCAGGCGAATCTCTTTACCCGGAACCAATTCACCAGCCAGTATTTGCTGTGCCAGCGGGTGTTCGATCTGAGGCTGAATTGCAAGTTTCagatgc > 2:1329212/1‑146 (MQ=255) | GTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGGCGACAATCCGGTCTTCATTAACTTCCAGGCGAATCACTTTACCCGGAACCAATTCACCAGACAGTATTTGCTGTGCCAGCGGGTTTTCGATCTGCTGCTGAATTGCACGTTTCAGAGGA > NC_000913/2731433‑2731729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |