| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,754,946 | C→T | 6.5% | N17N (AAC→AAT) ‡ | smpB → | tmRNA‑binding trans‑translation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,754,946 | 0 | C | T | 6.5% | 292.0 / 7.8 | 107 | N17N (AAC→AAT) ‡ | smpB | tmRNA‑binding trans‑translation protein |
| Reads supporting (aligned to +/- strand): ref base C (52/47); new base T (2/5); total (55/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.22e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGTTT > NC_000913/2754798‑2755093 | aaCATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgc > 1:1392314/1‑149 (MQ=255) aCAACGGGTTCATGCTAAGATAGAGCCTGGTCCCCCGCCGGATTGATATGTGGTGTTTTCGATTTCAGATAACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTTGTTCAGCGACCATCGCGCTTGTTAAgcgcg < 2:1034732/149‑1 (MQ=255) cATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTGTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAgcgcgc < 2:76098/149‑1 (MQ=255) aaTCGGGTTCATGCTACGATAGAGCCATGTCCCCCGCAGGATTGATATGGGGTCTCATCGATTTCAGATTACCGATGATTCACGACTCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTGTTAAgcgcga < 2:891145/148‑2 (MQ=255) aTCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGcc > 1:436216/1‑149 (MQ=255) aTCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGAGTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACCAGCGCGcc > 1:1081298/1‑149 (MQ=255) aTCGGGTTCATGCTAAGATAGAGCCTTGTCCAACGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGAAGCTTATGACGAAGAAAAAAGCACATAACCCTGGTTCAGCGCCCATCGCGCTTAACAACCGCGcc > 1:1372658/1‑149 (MQ=255) tCGGGTTCCAGCTAAGATAGAGCCTGGTCCCCCGCAGGATTGCTATGGGGTGGTGTCGATTTCAGATTACCGATGCTTCACGACGCGTATGACTAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTGTTAAgcgcgatg < 2:1039095/149‑4 (MQ=255) tCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATCGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGccc > 2:266401/1‑149 (MQ=255) ggTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTGTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTGTTAAgcgcgatggtc < 1:1416469/149‑7 (MQ=255) gTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGTGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTGTTAAgcgcgatggtcg < 2:1261586/149‑8 (MQ=255) tCATGCTAAGATAGAGCCTTGTCCCCCGCACGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAACAAGCACATAAACCTGGTTCAGCGCCCATCGCGCTTAACACGCGCGCCCGTCACg > 1:1378218/1‑149 (MQ=255) aTGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGaa > 1:476803/1‑149 (MQ=255) gCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATa < 2:40136/149‑1 (MQ=255) tAAGATAGCGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACt > 2:64249/1‑149 (MQ=255) tAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACt > 2:1367225/1‑149 (MQ=255) aaGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGCCCATCGCGCTTAACAAGCGCGCCCGTCACGAATACtt > 1:76923/1‑149 (MQ=255) gATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTa > 2:1222054/1‑149 (MQ=255) aTAGAGCCTTGTCCCCCGCAGGATTGATATGGGTTGTTTTCGATTTCAGTTTACCGATTATTAACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAAAAAGCGCGCCCGTCACGAATACTTTAt > 1:863059/1‑149 (MQ=255) aTAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTAt < 2:1145954/149‑1 (MQ=255) aTAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTAt < 1:393682/149‑1 (MQ=255) tAGAGCCGTGTCCCCCGCAGGATTGATATGGGGTGTTTTAGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGAACAGCGCGCTTAACAAGCGCGCCCCTCAGGAATACTTTATc > 1:25991/1‑149 (MQ=255) gagCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCga > 1:683138/1‑149 (MQ=255) agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc < 1:207277/140‑1 (MQ=255) agCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATAc > 2:207277/1‑140 (MQ=255) gTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAATAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAagag < 1:966045/149‑1 (MQ=255) tCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCACATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTAAGCGACCATCCCGCTAAACAAGCCCGCCCGTCACGAATACTGTATCGAagaagata > 2:844739/1‑147 (MQ=255) cccccGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGtt < 1:1367225/149‑1 (MQ=255) ccccGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAATCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTc > 2:1560426/1‑149 (MQ=255) cccGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCg > 2:481499/1‑149 (MQ=255) cccGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCg > 2:1500374/1‑149 (MQ=255) cGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGaa < 2:455799/149‑1 (MQ=255) gCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAg < 2:433721/149‑1 (MQ=255) ggATTGATATGGGGTGTATTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCgg > 2:468321/1‑149 (MQ=255) gATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCggg > 2:903848/1‑149 (MQ=255) aTTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGa < 2:783582/149‑1 (MQ=255) atatGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTg > 1:1512851/1‑149 (MQ=255) atatGGGGTGTTTTCGATTTCAGATTACCGATGATTAACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGCCCCTCGCGCTGAACAAGCGCGCCCGGCACGAATACTTTATCGAAGAACAGTTCGAAGAGGGACTTg > 2:686732/1‑149 (MQ=255) atGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGcc < 1:1500374/149‑1 (MQ=255) atGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGcc < 1:823782/149‑1 (MQ=255) atGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTGCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGcc < 1:903298/149‑1 (MQ=255) tGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGCCCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGccc > 2:709732/1‑149 (MQ=255) gggTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTg > 2:1153590/1‑149 (MQ=255) gggTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTg > 1:997944/1‑149 (MQ=255) ggTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGc < 2:775653/149‑1 (MQ=255) ggTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGAGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGc < 2:349708/149‑1 (MQ=255) ttttCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAgg > 2:379099/1‑149 (MQ=255) ttCGATTTCATATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCt < 2:46959/149‑1 (MQ=255) cGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTgg < 1:308660/149‑1 (MQ=255) ttCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAg < 2:268159/149‑1 (MQ=255) ttCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACAAAAACCTCGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAg < 1:1012774/149‑1 (MQ=255) tCAGCTTACCGATGATGCACGACGCGTCTGACGCAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGt < 1:429286/149‑1 (MQ=255) aGATAACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAACCCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGACTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTa < 1:443236/149‑1 (MQ=255) gATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTaa > 2:421632/1‑149 (MQ=255) gATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTaa < 1:903848/149‑1 (MQ=255) aTTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGAGCCCGTCACGAATACTTTATCCAAGAAGATTTAGAAGCGGGAATTCCCCTGCAATGCTGGGATGTTaaa > 1:1019595/1‑149 (MQ=255) aCCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATcc < 1:32448/149‑1 (MQ=255) ccGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGCCTTGCCCTGCAAGGCTGGGAAGTTAAATccc > 1:1482326/1‑149 (MQ=255) cGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCt > 1:434150/1‑149 (MQ=255) cGATGATGCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGACGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCt < 1:104818/149‑1 (MQ=255) atgatTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTgc > 1:458839/1‑149 (MQ=255) tCACGACGTTTAATACGAAGAAAAAAGCAGATAAAGGTGGTTCAGTGACCATCGCGGTTAACAAGCGCGGCCGTGACGAATACTTTATGGATGAAGTTTTCTATGCGGGACTTGCCCTGCAAGGCTGGGATGTTTTATCCCTgggggcc < 2:934420/149‑7 (MQ=255) tCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGGCACGAATACTATATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCa < 2:278122/149‑1 (MQ=255) cACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAg < 2:158716/149‑1 (MQ=255) acgacgCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAgg > 1:1532424/1‑149 (MQ=255) gacgCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCTCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGTaa > 2:952378/1‑149 (MQ=255) gacgCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGaa > 1:334648/1‑149 (MQ=255) aCGAATAAAAAATCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAatat < 1:474227/149‑1 (MQ=255) gaagaaAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTAAATGGAAGAAGAGTAAGAAGCTGGACTTCCCCTGCAACGCTGGGAAGTTAACTCCCTGCGCGCAGCAAAAGCCAATATCa > 2:844581/1‑149 (MQ=255) atgaaAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAAACCCTGCGCGCAGGAAAAGCCAATATCAg > 2:1525860/3‑149 (MQ=255) agaaAAAAGCACATAAACCTGGTTCAGCGACCATCTCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGc < 2:127842/149‑1 (MQ=255) gaaAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCg > 2:472453/1‑149 (MQ=255) gaaAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTGTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAACTCCCTGCGCGCAGGAAAAGCCAATATCAGCg > 2:66863/1‑149 (MQ=255) aaaaaaGCACATAAACCTGGTTCAGCGCCCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTGGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAAAATCAGCgc > 2:78738/1‑148 (MQ=255) aaaaGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACCAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATACCTGCGCGAAGGAAAAGCAAATATCAGCGACa > 1:1440852/1‑149 (MQ=255) aaaaGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTGTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACa > 2:1285983/1‑149 (MQ=255) aaGCACTTAAACCTGGGTCAGCGACCAGCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGACGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGc < 2:1045799/149‑1 (MQ=255) aGCACATACACCTGGTTCTGCGTCCTTCGCGCGTAACAAGCGCGCCCTTCACGAATACTTTATCGAAGAAGAGGTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCTCAGGAAAAGCCAATATCAGCGACAGCt < 2:922918/149‑1 (MQ=255) aGCACATAAAGGTGGTTCAGCGACCATCGAGCTTACCAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGATTTCGAAGCGGGACTTGCCCTGCTAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGTCAGCt < 2:1019595/149‑1 (MQ=255) aTAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTc < 2:997944/149‑1 (MQ=255) aTAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTc > 2:417358/1‑149 (MQ=255) aTAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGAGGGACTTGCCCAGCAAGGCTGGGAAGTTAAATCCCTGCTAGAAGTAAAAGCCCATATCACCGACAGCAACGTc > 1:41459/1‑149 (MQ=255) cTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGACTACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGATGTTAAATCCCTGCGCGCAGGAAAAGCAAATATAAGCGACAGCTACGTACTTCTg > 2:881356/1‑149 (MQ=255) cTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTg > 1:1438661/1‑149 (MQ=255) tGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGc < 1:1222054/149‑1 (MQ=255) tGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTATATCGAAGAAGAGATCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGc < 1:875355/149‑1 (MQ=255) gtgcAGCGACCATCGCGCTTAACAAGCGCGCCAGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATAGCAGCGACAGCTACGTCCTTCTGCGt < 2:514314/146‑1 (MQ=255) gTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTACTTCTGCGt > 1:846666/1‑149 (MQ=255) tCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGa < 2:1542367/149‑1 (MQ=255) tCAGCGACCATAGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCTAAGAATATTTCGAAGCGGGACTTGCCCTGCAAGGCTGGTAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGa < 1:844739/149‑1 (MQ=255) gCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACgg > 1:158828/1‑149 (MQ=255) ccATCTCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGATGCTGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGagag < 2:681092/149‑1 (MQ=255) gcgcgCTTGTTAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCTCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCa > 1:624904/2‑149 (MQ=255) gcgcgCTTGTTAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCa > 1:465403/2‑149 (MQ=255) cgcTTCACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGACCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCAttt < 2:98118/149‑1 (MQ=255) cgcTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAATCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCAttt < 2:1392314/149‑1 (MQ=255) cTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGAAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGACAATATCAGCGACAGCTACGTCCATCTGCGAGACGGAGAGGCATTTCt > 2:1319016/1‑149 (MQ=255) taccAAGCGCGCCCGTCACGACTACTGTCTCGACGTAGTGTTCGAAGCGTGACTTGCCCGGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATCTCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGt < 2:863059/146‑1 (MQ=255) aaCAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGtt < 2:659892/149‑1 (MQ=255) aCAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTGCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGGCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGttt < 1:64249/149‑1 (MQ=255) | CTGGGTAACATCGGGTTCATGCTAAGATAGAGCCTTGTCCCCCGCAGGATTGATATGGGGTGTTTTCGATTTCAGATTACCGATGATTCACGACGCTTATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGTTT > NC_000913/2754798‑2755093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |