| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,768,609 | T→C | 9.7% | intergenic (+36/‑56) | yfjP → / → yfjQ | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,768,609 | 0 | T | C | 9.7% | 179.8 / 11.9 | 85 | intergenic (+36/‑56) | yfjP/yfjQ | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base T (34/36); new base C (5/3); total (40/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.95e-01 | |||||||||||
TCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCC > NC_000913/2768461‑2768754 | tCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGGCAGTGGCCCGCGCTGTCTGGGATTGCTGCGTCTGAGTGGTTAAGTCTGCCCTATTATTCTCCGAGCCCGGt > 1:1112107/1‑149 (MQ=255) gTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTg > 1:965812/1‑149 (MQ=255) ccTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGCCGCACTTGCGACAgg < 1:367764/149‑1 (MQ=255) ccccTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCAAGCCCTGCCGCACTTGCGACAGGGctcg < 1:245812/149‑3 (MQ=25) cccTTATTCCCGCCCCGGTGCGGACCATTATTCATGCCGTGCGTTCGTCGGTGGTGGCAGTGGCCCGCGATGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTTCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGctttc < 2:1541434/149‑1 (MQ=37) cccTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGctttc < 2:1535332/149‑1 (MQ=255) ccTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTATATTCTGCCGTATTATTCTCCGGGCCCTGTCGCTAGTGCGGCAGGTctttct > 1:1522547/1‑149 (MQ=25) cTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGctttctt < 1:614393/149‑1 (MQ=255) cTTAATCCCGCCCAGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGGGTTAGTGGCCCGCGCTGTCTGGGTTTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGctttctt < 2:904101/149‑1 (MQ=255) ccGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGt > 2:1098971/1‑149 (MQ=255) ccGCCCCGGAGCGGACCATTATTCAGGCCGTGCGGTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGt < 1:413485/149‑1 (MQ=255) ccGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGGCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTAc < 1:144027/149‑1 (MQ=255) cGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCGTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTAGTTTTAcc > 1:1386565/1‑149 (MQ=255) cGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCCAGTGCGGCAGGGCTTTCTTTATTTGTTTTAcc > 1:1380962/1‑149 (MQ=255) cGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTAcc < 2:76165/149‑1 (MQ=255) cGGGGCGGTCCATTATTGAGGCCGGGCGTTGCTGGGTGGTGTCAGTGGCCCGCGCTGTCTGTGATTTCTTCTTGTGTGAGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTAcc < 1:663402/149‑1 (MQ=255) gagCGGACCATTATACCGCCCGTGCGGTCCGCGGGGGTGGCAGGGGCCCGCGCGGTCTGGGATTGCTTCTTCTGAGGGTTTAATTCTGCCCTATTATTCTCCGCGCCCTGGCGCAAGTGCGGCAGGGCGTTCGTTATTTGTTTTACCCa < 2:1392790/147‑1 (MQ=255) ggACCATTATTCAGGACGGGCGTTCCTCGGTGGTGTCTGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACt < 2:1513941/149‑1 (MQ=255) gACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTg > 2:733078/1‑149 (MQ=255) aCCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTga > 2:84992/1‑149 (MQ=255) ccATTATTCAGGGCGTGCGTTCCTCGGTGGTGTCAGTGGCCCACGCTGTCTGGGATTTCTTGTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTgag < 2:1551083/149‑1 (MQ=255) ccATTAATCAGGCCGGGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCGGTCTGGGATTTCTTCTTCTGAGGGTTTAATTCTGCCCTATTCTGCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTgag < 2:1125659/149‑1 (MQ=38) cATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGCGCCCTGTCGCAAGTGCGGCAGGGCGTTGTTTATTTGTTTTACCCATACTgagg > 2:154420/1‑149 (MQ=255) cATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCACTATTATTATCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACACCTACTgagg > 2:1389352/1‑149 (MQ=255) ttattCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTgaggag > 1:792870/1‑149 (MQ=255) gcAGGCCGTGCGCTCCTCGGTGGTGGCAGCGGCACTCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTg < 2:175860/148‑1 (MQ=38) cAGGCCGTGCGTGCCTCGGGGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGc < 1:720636/149‑1 (MQ=255) tgtccGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTTGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCt < 1:1121365/146‑1 (MQ=255) gCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGAGTTCTTCTTCTGAGTGTTTAATTCTGCGCGATTTTTCTCCGAGCCCTGGCGCAAGTGCGGCAGGGCTGTCTTTTTTTGTTTTACGCATCCTGAGGAGTCTGCttt > 1:848441/1‑148 (MQ=37) gTGCGTTCCTCGGTGGTGGCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGa < 2:1391625/149‑1 (MQ=255) tGCGTGCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGAc < 2:1345767/149‑1 (MQ=255) ggCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGGCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGAc < 2:381169/148‑1 (MQ=255) cGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCAGAGTGTTTAATTCTGCCCTATTAATCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGAccc < 2:170143/149‑1 (MQ=255) ttCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGt > 1:67053/1‑149 (MQ=255) ccTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCt > 1:38660/1‑149 (MQ=255) gggggtCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGACTGTTAAATTCTGCCCTATTATTCTCCGAGCCCTGGCGCAAGGGCGGCAGGGCTTTCTTTATTTGTTTTCCCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTc < 2:505290/145‑1 (MQ=37) ggcgcAGTGGCCCGCGCTGGGTGGGATTTCTTCTTCTGAGTGGTAAATTCTGCCCTATTTTTCTCCGAGCCCGCTCGCACGTGCTGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTcgc < 1:715347/145‑1 (MQ=38) tCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCt > 2:815060/1‑149 (MQ=255) tCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCt > 2:478281/1‑149 (MQ=255) aGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCttt > 2:5970/1‑149 (MQ=255) aGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGGGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCttt < 1:1129951/149‑1 (MQ=255) gTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTg > 2:1143362/1‑149 (MQ=255) gTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTg > 2:1234470/1‑149 (MQ=255) ggCCCGCGCTGGCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGgc < 1:1556180/149‑1 (MQ=255) ccGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGgcgcg > 2:371266/1‑148 (MQ=255) ccGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCt > 1:995757/1‑149 (MQ=255) ccGCGCTGTCTGGGATTTCTTCTTCTGAGTGAGAAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTGCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCt < 1:1036588/149‑1 (MQ=255) cgcgCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCATATTATTCTCCGAGCCCTGGCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTTGCGCTTTGGCGCTg < 1:1484451/149‑1 (MQ=255) gcTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCCTTGGCGCTGCaa < 1:587331/149‑1 (MQ=255) tGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAAt < 1:84992/149‑1 (MQ=255) gTCTTGGTTTTCTTCTTTTGAGTGGTTAATTCTGCCCTTTAATTGTCCTATCCCTTTCTCAAGTGAGGCAGTGCTTTCTTTATTTGTTTTACCCATACTTAGGAGTCTTATTAAGACCCGTCTGGCTTCGCTCTTTGGCGCTGCATATc < 2:1111080/149‑1 (MQ=255) cTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATACTCCGAGCCCTGTCTCAAGTGAGGCAGGGCTTTCTTTATTTGTTTTAAACATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTTGCGCTGCAAATCtt > 1:1266614/1‑149 (MQ=38) tGGGATTTCTTCTTCTTAGTGTTTAATTCTGACCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTa < 2:929428/149‑1 (MQ=255) tGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTa > 1:1293112/1‑149 (MQ=255) tGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTATCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGTAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTa > 2:625864/1‑149 (MQ=255) ggggATTGCTTCTTCTGAGGGTTTAATTCTGCCCTATTATTCTCCGATCCCTTGCGCAAGTGCGGCAGGGCTTTCTTTATTTGGTTTACCCTTACTGAGGAGTCTGCTTATGAGCCGTCTGGCTTGGCGCTTTGGCGCTGCAAATCTTa < 1:1152057/148‑1 (MQ=255) gggAGTTCTCCTTATGAGTGTTAAATTCTGCCCTATTATTCTCCGCGCCCTGTCGCACGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGCGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTAt < 2:1418081/149‑1 (MQ=37) aTTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTATCCGAGCCCTGTCGGAAGTGCGGCAGGGCTTTCTTTATTTGTTATACCCAGTCTGAGGAGTCTGCTTATGACCCCTCTGGCTTCGCGCTTTGTCGCTGCAAATCTTATTCg > 2:541663/1‑149 (MQ=38) tttCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGc > 2:783623/1‑149 (MQ=255) ttcttctGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCAGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCAAACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTCTCGCTGCAAATCTTATTAGCCGTg > 1:350924/1‑149 (MQ=38) tcttctGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGa < 2:866675/149‑1 (MQ=255) aggctttAATTCTTCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGCCCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGAccgtccg < 2:1522547/145‑1 (MQ=255) tttAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTaa > 1:332298/1‑149 (MQ=255) ttCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGt > 1:1142453/1‑149 (MQ=255) cccTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAaga > 1:337972/1‑149 (MQ=255) cTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTCCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGt < 1:554467/149‑1 (MQ=255) tattatTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGtt < 1:825725/149‑1 (MQ=255) tattatTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGAGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGATAACCCGTGAAGAGtt > 2:128123/1‑149 (MQ=255) tattatTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACACATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGtt > 2:361145/1‑149 (MQ=255) attattCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTACCCCGTGAAGAGTTa > 1:727286/1‑149 (MQ=255) aatattCTCCGAGCCCTTCCGCACTTGCGGCAGGGCTTTCTTTATTTGTTTCACCCATTCTGTGGACTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTa < 2:1450408/147‑1 (MQ=21) ttattCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTAt < 1:733078/149‑1 (MQ=255) actcgccGAGCCCTGGCGCCAGTGCGGCAGGGCTGTCTTTATTTGTTTTACCCCTACTGAGGAGGCTGCTTATGCCCCGTCTGGCTTCGCGCGTTGGCGCTGCAAATCTTATTCGCCGTGACCGGCCGTAAACCCGTGAAGAGTTAttt < 2:1112107/144‑1 (MQ=255) ttCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTc < 1:1206912/149‑1 (MQ=255) tcCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTAATTGTTTTACCCATACAGAGGAGTCTGCTTATGACCCGTCTGGCTTCGGGCTTTGGCGATGCAAATCTTATTCGCCGTGCCCGTCCGTTAACCCGTGAAGAGGTATTTcgcg > 1:1340795/1‑149 (MQ=25) gaaaGCCCTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgt > 2:412816/4‑149 (MQ=21) ccGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgt < 2:1275196/149‑1 (MQ=255) cGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgtg < 1:1480258/149‑1 (MQ=255) aaGCCCTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgtga > 1:922971/2‑148 (MQ=255) aGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGATTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgtggt < 1:712799/149‑1 (MQ=255) aGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTGGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCgtggt < 2:898470/149‑1 (MQ=255) cccTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTTGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGc > 2:795694/1‑149 (MQ=21) ccTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCAGTTAACCCGTGAAGAGTTATTTCGCGTGGTGcc > 1:1109380/1‑149 (MQ=255) ccTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCATATCTTATTCGCGGTGCCCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGcc > 1:1180338/1‑149 (MQ=21) ccTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGcc > 1:184626/1‑149 (MQ=255) cTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGccc > 2:255638/1‑149 (MQ=255) | TCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGAGTGTTTAATTCTGCCCTATTATTCTCCGAGCCCTGTCGCAAGTGCGGCAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCC > NC_000913/2768461‑2768754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |