| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,801,056 | A→T | 6.1% | N31I (AAT→ATT) | nrdI → | NrdEF cluster assembly flavodoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,801,056 | 0 | A | T | 6.1% | 261.0 / 4.7 | 103 | N31I (AAT→ATT) | nrdI | NrdEF cluster assembly flavodoxin |
| Reads supporting (aligned to +/- strand): ref base A (54/42); new base T (5/2); total (59/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GGTTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGC > NC_000913/2800909‑2801195 | ggtTTCGGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAAt < 1:1519698/149‑1 (MQ=255)ggtTTCCGTCCGGACATGATTAACCGTCTGCACCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAAt < 1:60359/149‑1 (MQ=255) gtTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGATTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATg > 1:1106316/1‑149 (MQ=255) gtTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCAAGAGACAGCTCAGATACTTCTCCAGCAGCTCCGAAAACCCGCAGCGATTTATGGAACGATTAGCTCTGCACGCGGTGCCCATCCCCCACAATg > 2:1110149/1‑149 (MQ=255) tttCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGa < 2:943631/149‑1 (MQ=255) ttCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAg < 1:452803/149‑1 (MQ=255) tccgtccgGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGc > 2:619179/1‑149 (MQ=255) cgtccgGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACCCGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCgg < 2:1511720/149‑1 (MQ=255) ccgGACATGATTAACCGTCTTCATCCAGCGCCACAAGAGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGGCCGCGGTGCGCATCCCGCTCATTTAGCGGGat < 2:1267165/149‑2 (MQ=255) ccgGAAATGATTAACCGTCTGCATCCAGCGCCAGACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGGAGCTCCGAAAACACGCAGCGTTTTATCAAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCATTGAGCGGGat < 2:1097822/149‑2 (MQ=255) cgGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAAc > 1:190095/1‑149 (MQ=255) gACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACgg > 1:985352/1‑149 (MQ=255) cATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGAt < 1:827863/149‑1 (MQ=255) aTGATTAACCGTCTGCATCCAGCGCCGCACGCGGCCAGTGCATGAGCCAGCTCGGCTACTTGTCCAGCAGCTACGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCAGCGCAATGAGCGGGAGCGGAtt > 1:512568/1‑149 (MQ=255) aTGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCAGCGGTGTGCATCCCGCTCAATGAGCGGGAACGGAtt > 1:1128374/1‑149 (MQ=255) tGATTACCCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTCCTTCTCCCGCAGCTCCGAAAACACGCAGCGTGTGATCGCACGTATAGGTCTGCCCGCGGGGCGCCTCCCGCTCAATGAGCGGGAACGGATTc > 2:392898/1‑149 (MQ=255) tGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTc < 2:415762/149‑1 (MQ=255) gATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCa > 1:142860/1‑149 (MQ=255) aTTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCTTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAg < 1:144857/149‑1 (MQ=255) aTTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGGCTGCCCGCGGTGCGCATCCCGCTCAATAAGCGGGAACGGATTCAg < 2:985054/149‑1 (MQ=255) aTTAACCGTCTGCATCCAGCGCCACACGCGGCCACTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACCCAGCGTTTTAACGACCGTTTAGGTCTGCCCGCGGTGCGCATCACGCTCAATGAGCGGCAACGGAATCAg > 1:207441/1‑149 (MQ=255) aCCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAg > 2:628366/1‑149 (MQ=255) aCCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAg > 1:309497/1‑149 (MQ=255) ccGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCGCCGAAAACCCCCAGCGTAGTATCGATCGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGCGCGGGACCGGAGTCAGGTAgc > 2:1145289/1‑148 (MQ=255) gTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGGTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACg > 1:1538225/1‑149 (MQ=255) tCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGa < 2:1110868/149‑1 (MQ=255) tCTGCATCCAGCGCCACACGCGGCCAGTGCAGGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGa < 1:1264586/149‑1 (MQ=255) gCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTGTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGCGcc > 1:1521552/1‑149 (MQ=255) gCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGAAGAGcc > 2:486873/1‑149 (MQ=255) cATCCAGCGCCACCCGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAACACACGCAGCGTTTTATCGAACGTTGAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCt < 1:838433/149‑1 (MQ=255) aTCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCtt < 1:1318835/149‑1 (MQ=255) ccAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGCAAACACGCAGCGGTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTAc < 1:1110080/149‑1 (MQ=255) gcgcCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATc < 1:36442/149‑1 (MQ=255) gcgcCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATc < 2:577661/149‑1 (MQ=255) acacGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCCGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGCGCGGGAACGGATTCAGGTAGACGAGCCTTACAGCCTGAt > 1:1490101/1‑149 (MQ=255) cacGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATc < 2:392415/149‑1 (MQ=255) cacGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATc < 1:1217501/149‑1 (MQ=255) acGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATTCGCGGGAACGGATTCAGGTAGACCAGCCTTACATCCTGATCg > 2:115922/1‑149 (MQ=255) gcgGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTg < 2:120295/149‑1 (MQ=255) gCCAGTGCATGAGCCAGCTCGTCTACTTCTCCCGCAGCCCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGCGAACGGATTCAGGTACCAGAGCCTTACATCCTGATCGTGccc > 2:297048/1‑149 (MQ=255) gggCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGGGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCtt < 2:1385838/147‑1 (MQ=255) cATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGCCGAGCCTTACATCCTGATCGTGCCCTCTTAcg > 1:600475/1‑149 (MQ=255) aTGAGCCAGCTCGTCTACTTCTCCATCAGCTCCGAAAACACGCAGCGTTGTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGCCGCGCCTTACATCCTGAGCGTGCCCTCTGAcgg > 1:1087610/1‑149 (MQ=255) aTGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACCCGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcgg > 1:329324/1‑149 (MQ=255) gAGCCAGCTCGGCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGTTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcggcg < 2:907305/149‑1 (MQ=255) ccAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGTTTCAGGGAGACGAGCCGTACATCCTGATCGTGCCCTCTTAcggcgccg > 1:867166/1‑149 (MQ=255) ccAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcggcggcg < 2:1419785/149‑1 (MQ=255) gCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGCGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAccgcggcggcg > 1:1430079/1‑149 (MQ=255) gCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcggcggcggcg > 1:357987/1‑149 (MQ=255) gCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTAcggcggcggcg > 1:656448/1‑149 (MQ=255) cGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTa < 2:190095/149‑1 (MQ=255) gTCTACTTCTCCAGCCGCTCCGAAAACACGGAGCGTTTAATCGAACGTTTAGGTCTGCCCGCGGTGAGCATCCCGCTCAATGAGCGGGAACGCATTCAGGTAGACGAGAGTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCTGtcc > 1:852112/1‑147 (MQ=255) cTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGATTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGCGCCTTACATCATGCTCGTGCCCTCTTACTGCGGCGGCGGTCCgg > 1:1388561/1‑149 (MQ=255) cTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATAGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGAGGGAACGGATTCAGGTAGACGAGCGTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACgg > 1:287951/1‑149 (MQ=255) aCTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGCGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCt > 1:1453191/1‑149 (MQ=255) ttCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCACAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGTCGGTACGGCAgg > 2:1004179/1‑149 (MQ=255) tatcCAGAAGCTCCGAAAACACTCAGCGTTTAATCTAACGTTTAGGTCAGCACGCGGAGCGCATCCCGCTCAATGAGAGGGAAAGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCATCTTACGGCGGAGCTGGTACGGCTTgc > 2:1474277/3‑149 (MQ=255) ctcCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCGTTACATCCTGATCGTTCCCTCTTACGGCGGCGGCGGTACGGCTGgcg > 2:1048340/1‑149 (MQ=255) tcCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGgcgc > 2:45681/1‑149 (MQ=255) ccAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCACATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGcgcg < 2:1254385/149‑1 (MQ=255) agcagcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGACCGGATTCAGGTAGCCGAGCCTTACATCCTGATCGTGCCCTCTTCCGGCGGCGGCGGTACGGCTGGCGCGGt > 2:1545336/1‑149 (MQ=255) agcagcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGGCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGt < 1:689777/149‑1 (MQ=255) gcagcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTg < 1:176460/149‑1 (MQ=255) gcagcTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTg > 2:572912/1‑149 (MQ=255) cGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGAc > 1:707155/1‑149 (MQ=255) aaaCACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAgg < 1:469937/149‑1 (MQ=255) aaaCACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGGGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGAGCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAgg < 2:299786/149‑1 (MQ=255) aaCACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGt < 2:960515/149‑1 (MQ=255) ttttATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCtttt < 1:202755/149‑1 (MQ=255) ttttATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCtttt < 1:1441791/149‑1 (MQ=255) tttAGCGCACGTTTAGGTCTGCCCGCGGCGCGCATCCCGCTCAATCCGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCttttt < 1:1113706/149‑1 (MQ=255) aTCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTaaa > 1:1253468/1‑149 (MQ=255) tCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGCTCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAac > 1:701009/1‑149 (MQ=255) tCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCttttt < 1:1285677/145‑1 (MQ=255) tCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCttttt > 2:1285677/1‑145 (MQ=255) tCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAac > 2:654186/1‑149 (MQ=255) gAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAacga > 1:644049/1‑149 (MQ=255) gAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCGCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTGTAAacgc > 1:1273394/1‑148 (MQ=255) aaCGTTTAGGTCTGCCCGCGGTGCGCATCCCTCTAAATGAGCGGGAACGGATTCATGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTGCGGCGGCGGCGGTACGGCTGGCGCGGTGCCCCGACAGGTAAGTCGCGGTTTTAccgac > 1:930251/1‑149 (MQ=255) aaCGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAacgac > 1:1460835/1‑149 (MQ=255) aaCGGTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGACCGGAGTCAGGTAGACGATCCTTACATCCTGATAGTGCCCTCTGACGGCGGCGGCGGTACGGCTGGCGCGGTGCCCCGACAGGGAATTAGCGTTGTAAacgac > 1:925941/1‑149 (MQ=255) cGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGATCGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAAcgacga < 1:628366/149‑1 (MQ=255) ttAGGTCTGCCCGCGGTGCGCATCCCGCGCAATGAGCGGTAACTGATACAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCATACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGca < 1:1302985/149‑1 (MQ=255) aGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGcaca > 1:216866/1‑149 (MQ=255) gTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTGTAAACGACGAGCACAAc > 2:1238126/1‑149 (MQ=255) tGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCgg < 2:309497/149‑1 (MQ=255) gCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGCCAGGTAATTCGCTTTTTAAACGACGAGCACAACCggg > 1:202827/1‑149 (MQ=255) gCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGAGTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGCCAGGTAATTCGCTTTTTAACCGGCGAGCACAACCggg > 1:743319/1‑149 (MQ=255) ccGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGCCAGGGAATTCGCGTTTTAAACGCCGAGCACAACCGGGCg > 1:425002/1‑149 (MQ=255) ccGAGGTGAGCATCCCGCTCAATGATATGGAACGGATTCAGGTAGACGAGCCTTACATCCTGCTCGTGCCCTCTTACGGCGTCGGCGGTCAGTCTGGCTCGGTGCCACGACAGGGAATGCGCTTTTTAAACGACGGGCCCACCCGGGCg > 2:891196/1‑149 (MQ=255) gcgGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGTCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTGGCTTTTTAAACGACGAGCACAACCGGGCGtt < 1:486873/149‑1 (MQ=255) ccgGTGCCCCTCCCGCTCAAAGAGCGGGAACGGATTCAGGTCGACGAGCCTTACATCCAGCTCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGtt < 1:1463981/148‑1 (MQ=255) tccgttCCCGCTCATTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTc > 2:387159/6‑149 (MQ=255) gttCCCGCTCATTGAGCGGGATCGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg > 1:1438253/3‑149 (MQ=255) gttCCCGCTCATTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTTCGGCTGGCGCGGTGCCACGCCAGGTAATACGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg > 1:1207801/3‑149 (MQ=255) gttCCCGCTCATTGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg > 2:509873/3‑149 (MQ=255) cATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTCCGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg < 2:1433556/149‑1 (MQ=255) cATCCCGCACAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTcgcg < 2:337202/149‑1 (MQ=255) tcgcGCTCAATGAGCGGGAACGGATTCAGGTAGAGGAGCCTTACATCCTGATCCTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCgcggc < 2:207441/146‑1 (MQ=255) tCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACTTCCTGCTCGTGCCGTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCAGGACTGTTAATTGGATTTTTAAACGACGAGCACAACCGGGACTGGCGTCgcggc > 2:1463501/1‑149 (MQ=255) | GGTTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGC > NC_000913/2800909‑2801195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |