| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 216,074 | T→A | 5.0% | intergenic (+95/+105) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 216,074 | 0 | T | A | 5.0% | 279.7 / 4.3 | 100 | intergenic (+95/+105) | nlpE/yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (53/42); new base A (3/2); total (56/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.37e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GATACGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCTTGATATAAATCC > NC_000913/215926‑216222 | gATACGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGttt < 1:1269927/149‑1 (MQ=255) cGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTAcgc < 1:261292/149‑1 (MQ=255) ggCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTAcgcc > 2:122302/1‑149 (MQ=255) aGGGAAATTTTACCCCCCCCAGGAGTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAACCAGGCCAGAAGGATATATTTCAACCTTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTAcgccgaa > 1:90705/1‑147 (MQ=39) ggAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGCAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATc > 2:1228673/1‑149 (MQ=255) ggAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCACCATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACTCCGCATc > 1:1021620/1‑149 (MQ=255) ggAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATc > 2:825945/1‑149 (MQ=255) ggAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATc > 1:322379/1‑149 (MQ=255) aTTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc < 1:793323/149‑1 (MQ=255) ttttACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa < 1:570508/149‑1 (MQ=255) ttACCCCAACCATGATTGCAGTACTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAATGATATATATCAACATTTTCAATTTGCACGTTTTTTGTAGGCCAGATGCGGCGTAAACGCCTTATCCGGccta < 1:161732/149‑4 (MQ=255) ccccAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGt > 2:98524/1‑149 (MQ=255) ccATCCTGGATTGCAGTAGTTTGGGGCTGTAACCCTTCTTGAGTCAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGc < 2:150202/149‑1 (MQ=38) cAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAAc < 1:443088/149‑1 (MQ=255) gtttGCAGTTGTTTGGGGCAGTAACCCGTCTTGAGACAGTAACAAACGTAAAACAGGCCAGATGGATATATTTCATCATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGcc < 2:711801/147‑1 (MQ=38) gATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTGGTGCTCAACGcc > 2:709721/1‑149 (MQ=255) tGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCCAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGa < 2:1204423/149‑1 (MQ=255) gCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGACACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGAt < 1:937490/149‑1 (MQ=255) gCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCTACATTTTGAATTTGCACTTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAAGGTGCTCAACGACTGAt > 1:1383091/1‑149 (MQ=255) gCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGAt < 1:776670/149‑1 (MQ=255) gtagtTTGGGGCAGTAACCCGTCTTGAGACAGCAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGTTTCTCAACGCCTGATGCg > 1:396436/1‑149 (MQ=255) gtTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACg > 2:548122/1‑149 (MQ=255) tttGGGGCAGTACCCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGc > 1:1499144/1‑149 (MQ=255) gggCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGgc > 2:1152537/1‑149 (MQ=255) aaCCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCtt < 1:122302/149‑1 (MQ=255) cccGTCTTGAGACAGAAACAAACTCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTTTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACTCCTGATGCGACGCTGGCGCGTCTTAt < 1:120198/149‑1 (MQ=255) cccGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTAt < 1:357115/149‑1 (MQ=255) ccGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTAAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGAGTTTACGCCGCATCAGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGAGTCTTAta > 1:47708/1‑148 (MQ=255) cGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCa < 1:441396/149‑1 (MQ=255) gTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCAt > 2:20830/1‑149 (MQ=255) cTTGAGACAGAAACAAACGCAAAACAGGCCAGAATGAAATATTTCAACATTTTGAATTTGCACGTTTTTTTTAGGCCGGATAAGTCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGc < 2:567601/149‑1 (MQ=255) cTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGc < 1:1226522/149‑1 (MQ=255) cTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGc < 1:847858/149‑1 (MQ=255) ttGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGcc < 1:1156386/149‑1 (MQ=255) ttGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGcc > 1:1506080/1‑149 (MQ=255) ttGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGcc < 1:548122/149‑1 (MQ=255) gagaAAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGAGACGCTGGCGCGTCTTATCATGCCTa > 2:719865/1‑149 (MQ=255) agaCAGAAACACACGCAAAACACGCCAGAAGCATATATTTC‑ACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATACCGCGTTTACGCCGCATCCGGCAATGGTGCGCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa < 1:490192/149‑1 (MQ=25) cAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAc > 1:283459/1‑149 (MQ=255) aGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTATGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGCTGCTCAACGCCTGATCCGACGCTGGAGCGTCTTATCATGCCTACAAcc > 1:481234/1‑149 (MQ=255) aaacaaacGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAcccc > 1:987646/1‑149 (MQ=255) aacaaacCCAAAACAGGCCAGAACGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAccccc < 2:355643/149‑1 (MQ=255) caaacGCAAAACAGGCCAGAATGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCt < 2:416854/149‑1 (MQ=255) aaaacGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTGTTTTGGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCt < 2:1535429/148‑1 (MQ=255) aaacGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACTCCGCATCCGGCAATCGTCCTCAACGCCTGATGCGACGCTGGCGCGTCATATCATGCATACAACCCCCCTc > 2:1086835/1‑149 (MQ=38) ccGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCAt > 2:1100770/2‑149 (MQ=255) acGCAAAACAGGCCAGAAGGATATATATCAACATTTTGAATTTGCACGTTATTAGTAGGCCGGATAAGCCGTATACGCCGCATCCGGCAATGGTGATCAAAGCCTGATGCGACTCTGGCGCGTCTTATCATGCCTACAACCCCcatcat > 1:1147500/1‑149 (MQ=25) gCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTCCAACCCCCCTCATAc > 2:747257/1‑149 (MQ=255) gCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATAc > 2:741382/1‑149 (MQ=255) gCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATAc > 1:179458/1‑149 (MQ=255) gCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCATTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATAc < 1:220552/149‑1 (MQ=255) aaaaCAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCAGACCt > 2:1487906/1‑149 (MQ=255) aaaCAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGCCGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATCCCtt > 2:150536/1‑149 (MQ=255) aCAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTaa < 1:542695/149‑1 (MQ=255) ctggCCAGAAGGTTTTATTTCATCATTTTGAATTTGCACGTTTTTTGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAg < 2:936556/147‑1 (MQ=255) aGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGAt > 1:415216/1‑149 (MQ=255) aGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGAt > 1:900308/1‑149 (MQ=255) aGAAGGATATATTTCAACATTNTGAATTTGCNNGTTTTTTGTAGNCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGAt > 1:421100/1‑149 (MQ=255) gAAGGATATATTTCTACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCTATGGTTCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAGCCCCCTCATACCTTAAGGCGGATa < 1:962383/149‑1 (MQ=255) aacgATATAATTCAACATTTTGAATTTGCACGTTTTATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATaa < 2:355251/146‑1 (MQ=255) ggATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAgg < 1:566033/149‑1 (MQ=255) gATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGc < 1:1345456/149‑1 (MQ=255) gATATATTTCAACATTTAGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGc < 2:921916/149‑1 (MQ=255) atatatTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCa > 2:467649/1‑149 (MQ=255) atatTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCAtt < 1:1192549/149‑1 (MQ=255) atTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACTCAGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGTCGCGTCTTATCATGCCTACACCCCACCTCATACCTTAAGTCGGATAAGGCATTTa > 1:328282/1‑149 (MQ=37) atTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTTCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACATTAAGGCGGATAAGGCATTTa > 1:1079365/1‑149 (MQ=255) tttCAACATTTTGAATTTGCACGTTTTTTTTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTAc < 2:1142794/149‑1 (MQ=255) tttCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTAc > 1:664772/1‑149 (MQ=255) ttCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATTAGGCATTTACt > 1:1164580/1‑149 (MQ=255) ttCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACt > 2:786284/1‑149 (MQ=255) ttCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACt > 2:555495/1‑149 (MQ=255) tCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACTACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACtt > 1:982542/1‑149 (MQ=255) ccAACA‑TTTGAATTTGCACGTTTTAGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAGGGAGCTCAACGCCTGATCCGACGCGGGCGCGGCGTATCATGCCTACACCCCCCCTCATCCCTTAAGGCGGATAAGGCATTTACtgt < 2:1046057/148‑3 (MQ=25) cAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACttt < 1:20830/149‑1 (MQ=255) aCATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTAt > 1:601790/1‑149 (MQ=255) cATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGAATTTACTTAAta > 1:244179/1‑148 (MQ=255) tGAATTTGCACGTTTTTTGTAGGCCGGATAAGTCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCgg < 2:1021620/149‑1 (MQ=255) tGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCgg < 1:709721/149‑1 (MQ=255) tactttGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGTAATGGGGCTCAACGCCTGATGCGTCGCTGGCGCGTCTTATCATGCCTTCAACCGCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCggg < 2:1447548/146‑1 (MQ=37) aCGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACca > 1:52246/1‑149 (MQ=255) aCGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACca > 2:329255/1‑149 (MQ=255) gTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATCCCTTACGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACcaac < 2:1429680/149‑1 (MQ=255) ttttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCCTACCTTAAGGCGGATAAGGCATTAACTTTATCACCGGGTCAAACcaacc > 2:500671/1‑148 (MQ=255) ttttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAACCcaaca > 1:1012068/1‑149 (MQ=255) ttttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACcaaca > 2:1276296/1‑149 (MQ=255) tttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACcaacaa > 1:172900/1‑149 (MQ=255) tttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGCGCTCAACGCCTGAAGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACcaacaa < 2:662610/149‑1 (MQ=255) ttttGTAGGCAGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCATGATCCGACGCTGGAGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACaaa > 1:386514/1‑149 (MQ=255) tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGAc > 1:651673/1‑149 (MQ=255) ttgCCGGATGCGGCGTAAACGCCTTATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAACCCACCCAAGCGAcc > 2:1142239/3‑149 (MQ=37) ttgCCGGATGCGGCGTAAACGCCTTATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTAAAACCAACAAAGCGccc > 2:509441/3‑149 (MQ=38) cGGATGCGGCGTAAACGCCTTATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGcc > 1:1522100/1‑149 (MQ=38) cGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGcc > 2:369485/1‑149 (MQ=255) gATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCtt > 2:491266/1‑149 (MQ=255) gATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCtt < 2:361870/149‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCTTGa < 1:188045/149‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGAGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCTTGa < 2:599554/149‑1 (MQ=255) aGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCTTGata > 1:522760/1‑149 (MQ=255) tACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGCCCCGCCTTGATATAAATcc > 1:293862/1‑149 (MQ=255) | GATACGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAACCCGTCTTGAGACAGAAACAAACGCAAAACAGGCCAGAAGGATATATTTCAACATTTTGAATTTGCACGTTTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCTCAACGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAACCCCCCTCATACCTTAAGGCGGATAAGGCATTTACTTTATCACCGGGTCAAACCAACAAAGCGACCCGCCTTGATATAAATCC > NC_000913/215926‑216222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |