| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,250,989 | G→C | 7.9% | intergenic (+35/‑35) | yqjF → / → yqjG | putative quinol oxidase subunit/putative S‑transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,250,989 | 0 | G | C | 7.9% | 216.5 / 10.3 | 87 | intergenic (+35/‑35) | yqjF/yqjG | putative quinol oxidase subunit/putative S‑transferase |
| Reads supporting (aligned to +/- strand): ref base G (51/27); new base C (4/3); total (55/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
GTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATGGC > NC_000913/3250841‑3251137 | gTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGTTAAAAAACGaggagg > 2:317541/1‑149 (MQ=255)gTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGaggagg > 1:1545119/1‑149 (MQ=255) aaCTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAg < 2:594783/149‑1 (MQ=255) aaCTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAg > 2:384944/1‑149 (MQ=255) cTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGct > 2:1107825/1‑149 (MQ=255) gATGTTCATGAAACACCTGACAATTTCTTGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGt < 2:167796/149‑1 (MQ=255) tGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGCTTCCTCCTCGttt < 1:1300096/149‑1 (MQ=255) tGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGGATAGCATCGACCGCCTGCTGAATAAAAAGTGTTAAGCACGCGCTATACTTAACGATAAAAACCGAGGAGGAAGCTCCTCGttt < 2:1428864/149‑1 (MQ=255) gTTCATGAAAAACCTGACAATTTCTGGCGGATTCCGGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGtttt > 1:1502931/1‑149 (MQ=255) ttCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCCCGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTGCTCGttttt > 2:374744/1‑149 (MQ=255) cATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGc > 2:1136639/1‑149 (MQ=255) aTGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATATCATAGACCTCATGCTGAATAAAAAGTTGTAATCACTCTCTATACTTAACGATAAAAAACGAGGAGGAAGATACTCGttttttat > 2:1377321/1‑146 (MQ=255) aTGAAAAACCTGACAATTTCTGGCGGATTCCTACTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCt > 2:523721/1‑149 (MQ=255) aTGAAAAACCTGACAATATCTGGCGGATTCCTGCTGCTTGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAACAGTGGTAAGCACGCGCTATACATAACGATAAAAAACGCGGAGCTTCCTCCTCGttttttat < 1:626861/149‑4 (MQ=255) gAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCTCCTGCTGAATAAAAAGTGGTAAGAACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTAt > 1:878591/1‑149 (MQ=255) gAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATAGTTAACGATAAAAAACGAGTAGGAAGCTCCTCGTTTTTGCTAt > 2:119323/1‑149 (MQ=255) gAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTAt > 1:603245/1‑149 (MQ=255) aaaaaCCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTAtt > 2:445433/1‑149 (MQ=255) aaaaCCTGCAAATTTATGGCGGATTCCTGCTGCTGGCAATTTCCGGGCCGGGCGCGTCTAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTAAACTATAAAAAACGATGTGGAAGCTCCTCGTTTTTGCTATTg < 2:1051634/149‑1 (MQ=255) aaaaCCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGACGCTCCTCGTTTTTGCTATTg > 1:499203/1‑149 (MQ=255) aacccTGACAATATCTGGCGGATTCCTGCTGCTGGCAATTACCGGGCCTGGCGCGGATAGCATCGACCGCCTGCTGACTAAAAACTGGTAAGCACGCGCTAAACTTACCGCTAACCCACGCGGAGCAACCGCCTCGTTTTTGCTATTgg < 1:1235791/146‑1 (MQ=255) tGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCCCGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGgaggag > 2:1453739/1‑149 (MQ=255) gACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGATGAATAAAAAGTGGTAAGCACGAGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGgaga > 1:917820/1‑149 (MQ=255) acacTTTCTGGCGGATTCCTGCTGCTGGCAATTACGGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCCCGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGgagag < 2:1418723/149‑1 (MQ=255) aTTTCTGGCGGATTCCTGCTTCTGGCAATTACAGGTCCGGGCGCGTATAGCATCTAGCGACTGCTGAATAAATAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGATGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGaaa < 1:982705/149‑1 (MQ=255) cTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATg < 2:1098496/149‑1 (MQ=255) tGGCGGTTTCCTGCTGCTGGGAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATgg < 2:22912/149‑1 (MQ=255) tGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATgg > 1:792859/1‑149 (MQ=255) tGGCGGATTCCTGCTGCTGGCAAATACCGGGCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGGAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATgg < 2:1451163/149‑1 (MQ=255) gCGGATTCCTGCTGCTGGCAATTACCGGGCCGGGCGCGTATAGTATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGt < 1:684407/149‑1 (MQ=255) cGGATTCCTGCTGCTGGCAATTACCGGGCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTc < 1:1322390/149‑1 (MQ=255) ttCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACt < 1:147289/149‑1 (MQ=255) tgctgGCAATTACCGGTCCGGGCGCGTATAGCATCGCCCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGAc > 1:577508/1‑149 (MQ=255) tgctgGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGAc > 1:1232062/1‑149 (MQ=255) ggCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTTTTGGAGGAGAGATAAATGGGTCAACTGATTGACGGCg > 1:921230/1‑149 (MQ=255) aaTTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCt > 1:460295/1‑149 (MQ=255) aaTTACCGGTCCGGGCGCGTATAGCATCGACCGCCGGCGGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGGTTTTGGGATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCt > 2:1099455/1‑149 (MQ=255) ccGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGGGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCAt < 2:609904/149‑1 (MQ=255) cGGTACGTGCGCGTATAGCATGTACCGCCTGCTGAATAAATAGTGGTAACCACGCGATATACATAACGATAAAAACCGCGGAGTAAGCTCCTCGGTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATg < 2:1163727/149‑1 (MQ=255) ggTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGa > 2:164748/1‑149 (MQ=255) cGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACAcc < 2:241470/149‑1 (MQ=255) cGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACAcc > 2:454575/1‑149 (MQ=255) tataGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGCGGAGGAAGCTCCTCGTTTTTGCTATTGGTGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGa > 1:966856/1‑149 (MQ=255) tataGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGa > 1:1259239/1‑149 (MQ=255) cATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCa < 1:809991/149‑1 (MQ=255) aTCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAACCGAGGAGGAAGCGCCTCGTTTTTGCTATTGGCGGAGAGAAAAATGGGTCAACTCATTGACGGCGTCTGGCATGACACCTGGTACGATACCaa < 2:319328/149‑1 (MQ=255) tCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCaaa < 1:676976/149‑1 (MQ=255) aCCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGATTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCt > 2:1454278/1‑149 (MQ=255) gCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTAcc < 2:1502931/149‑1 (MQ=255) gAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGGGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGAGATGACACCTGGTACGATACCAAATCTACcggcggga > 2:1055715/1‑147 (MQ=255) gAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTa > 1:1204621/1‑149 (MQ=255) gAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGACAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCTGCGGTa > 2:503724/1‑149 (MQ=255) aaTAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTAGCGGCGGTaa > 1:39030/1‑149 (MQ=255) aaTAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTaa > 2:890510/1‑149 (MQ=255) aaTAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGCAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTaa < 1:159891/149‑1 (MQ=255) tAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAAt > 1:1257358/1‑149 (MQ=255) tAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAAt > 2:384379/1‑149 (MQ=255) aaaaaGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACAGATTGACGGCGTCTGGCATGACACCTGGTACGATAACAAATCTACCGGCGGTAAAtt > 1:57528/1‑149 (MQ=255) aaaGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTc > 2:538468/1‑149 (MQ=255) gTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAAc > 2:446690/1‑149 (MQ=255) tAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTc > 1:774003/1‑149 (MQ=255) gCAAGCGCTATACTTAACGATAAAAAACGAGGAGGAATCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGTGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGc < 1:1377321/149‑1 (MQ=255) aCGCGCTATACTTAACGATAAAAAACGATGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTAAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACAGGCGGTAAATTTAAACGTTCAGCtt > 2:1267478/1‑149 (MQ=255) aCGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCtt > 2:958900/1‑149 (MQ=255) gcgcTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTcc > 2:558542/1‑149 (MQ=255) tataCTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTAAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCAt < 2:878591/149‑1 (MQ=255) aCTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAAGTTCAACGTTCAGCTTCCGCATTTc > 1:774671/1‑149 (MQ=255) cTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCg > 1:852199/1‑149 (MQ=255) cTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTCGAGGAGAGAAAAATGGGTCAACTGATTGACTGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCTGCGGTAAATTTCAACGTTCAGCTTCCGCAATTCg > 2:318681/1‑149 (MQ=255) ttAACGATAAAAACCGAGGAGGAAGCTCCTCGTATTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCTTGACACCTGGTACGATACCAAATCTACCGCCGGTAAATTTAAACGATCAGCGTCCGCAATTCGt > 1:1343995/1‑149 (MQ=255) ttAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAAttt < 2:356941/125‑1 (MQ=255) ttAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAAttt > 1:356941/1‑125 (MQ=255) tAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCTTa > 2:188653/1‑149 (MQ=255) ctaTAAAAAACGAGGAGTATGCTCCTCGTTTTTGGTATTGGAGGAGAGAAAAATGGGTCAACTTATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTGCAGCTTCCGCATTTCGTAACt < 2:1505565/147‑1 (MQ=255) gATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCCGCTTCCGCATTTCGTATCTg > 2:628907/1‑149 (MQ=255) aTAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTgg < 1:523721/149‑1 (MQ=255) tAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGc < 1:119323/149‑1 (MQ=255) caaaaaCGAGGAGCTTCCTCCTCGTTTTTGCTATTTGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTAACGGCGGTAAATTTCAACGTTCAGCTTACGCATTTCGTAACTGGCt > 2:1064650/2‑149 (MQ=255) caaaaaCGAGGAGCTTCCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAAGTGATTGACGGCGTCAGGCATGACACCTGGTACGAGACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGcg > 2:502691/2‑148 (MQ=255) aaaaaaCGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCt < 1:1136639/149‑1 (MQ=255) aaaaaaCGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCt > 1:443936/1‑149 (MQ=255) aaaaCGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCa > 1:575097/1‑149 (MQ=255) aaaaCGAGGAGCTTCCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCTTAACTGGCTCa > 2:1569018/1‑149 (MQ=255) aaaCGCTGAGGAAGCGCCTCGTTTTTGCAATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCAc < 2:961754/149‑1 (MQ=255) aaaCGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCAc > 2:1118932/1‑149 (MQ=255) aaaCGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCAc > 1:1376066/1‑149 (MQ=255) aaCGAGGAGCTTCCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGGCTGGCATTACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTGCCGCATTTCGTAACTGGCtaccg > 2:1403213/1‑145 (MQ=255) cGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGc < 1:384944/149‑1 (MQ=255) gaggagGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCACCGTTCAGATTCCGCATTTCGTAACTGGCTCACTTcc > 1:519522/1‑149 (MQ=255) gaggaAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAGAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCAGAt > 1:805275/1‑149 (MQ=255) gacgaAGCTCCTCGTTTTTGGTATTGGAGGAGAGAAAAATTGGTCAACAGATTGACTGCGTCTGGCATGACACCAGGTACGATACCAAATCTACCGGCGGGAAATTTCAACGTACAGCTTCCGCATTTAGTAAATGGCTCACTTCCGAt > 2:923642/4‑149 (MQ=255) ggaAGCTCCTCGTTTTTGATATTGGAGGAGAGAAAAATGGGGCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATgg < 1:1107825/149‑1 (MQ=255) gaAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATggt > 2:187360/1‑148 (MQ=255) | GTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAAGCACGCGCTATACTTAACGATAAAAAACGAGGAGGAAGCTCCTCGTTTTTGCTATTGGAGGAGAGAAAAATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATGGC > NC_000913/3250841‑3251137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |