| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,969,434 | A→C | 5.8% | D135A (GAT→GCT) | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,969,434 | 0 | A | C | 5.8% | 299.6 / 4.5 | 120 | D135A (GAT→GCT) | wzzE | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| Reads supporting (aligned to +/- strand): ref base A (66/46); new base C (5/3); total (71/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
AACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCC > NC_000913/3969289‑3969576 | aaCATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCGGCAAACCGACTATTAC‑CAACAGCGGATGGTGGGCAACAGCAAGGCCGATgc > 1:1066270/1‑149 (MQ=255) aTGGCTTCTGCCGACCAACCATCGGTCTTGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGTCAACAGCAAAGCCGATgcggc > 1:985285/1‑149 (MQ=255) ttCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAACGCCGATGCGGCGTTGc > 1:638046/1‑149 (MQ=255) ttCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGc > 2:47434/1‑149 (MQ=255) tGCCGACCAACCATCGGTCATGCACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGGGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGGGGGCAACAGCAACGCCGCATCGGCTTTGCTgt < 2:760730/149‑2 (MQ=255) cGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCTCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATg > 2:1268787/1‑149 (MQ=255) gACCAACCATCGGTCATGGACGAAGCCTATAAAGACTTTCTTATGCAACTGGCCTAGTGGGATACCAGCAGAGAGTTATGGATGCAAACCGACTATTAA‑AAACAGCGGATGGTGGACAACCGCAAAGCCGATGCGGCGTCGCTGGATGa > 2:396883/1‑149 (MQ=255) accaaccaTCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAATCCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGaa > 2:591922/1‑149 (MQ=255) accaaccaTCGCGAATGGAGGAAGCCTATAAAGAGTTTGTTTTGCATCTGGCCGCGTGGGATACCCGCAGCGAGTTCTGGCTGCAAACAGACTATTAC‑AAACCGCGGATGGTGGGCAACAGCAACGCCGCATCGGCTTTGCTgttgccc < 2:252966/149‑7 (MQ=255) ccaaccaTCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGaaa > 2:921791/1‑149 (MQ=255) ccaaccaTCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGGTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGaaa < 2:901604/149‑1 (MQ=255) acccaTCGGTCATGGACGCAGCCGATAAAGAGTGTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGCGTTCTGGCTGCAAACCGACTATTAC‑AACCAGCGGATGGAGGGCAACAGCCAAGCCTATGCGGCGTAGCTGGATGAAATg > 1:852873/3‑149 (MQ=255) aaccaTCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACAGACTATTAC‑AAACAGCGGATGGTGCGCAACAGCAAAGCCGATGAGGCGTTGCTCGATCAAATg > 1:465315/1‑149 (MQ=255) ccaTCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGACTCGTGGGAAACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGAAGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGAt < 1:232682/149‑1 (MQ=255) cGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTaac < 2:787626/149‑1 (MQ=255) gTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTaacaa > 1:1129743/1‑149 (MQ=255) tCATGGACGAAGCCTATAAATAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAA‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTaacaac > 1:648507/1‑149 (MQ=255) aTGGACGAAGCCTATAAAGAGGTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACAt < 1:1182895/149‑1 (MQ=255) tGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGCTACCCGCAGAGAGTTCTGTCTGCCAGCCGGCTATTTC‑AAACAGCGGATGGTGGGCAACAGCAAAGAGGAAGCGGCGTTGCTGGATGATATGATTAACAACATc > 2:315743/1‑149 (MQ=255) tGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATc > 2:146160/1‑149 (MQ=255) aCGAAGCGTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAG‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAg < 1:586109/149‑1 (MQ=255) cGAAGCCTATAATGAGTTTGTTATGCAACGGGCCTCGTGGGATACCCGCAGCGAGGGCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGGGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAgg < 2:1391915/149‑2 (MQ=255) cGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGAGACACGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGGGGGCAACAGCAAAGCCGATCCGGCGGTGCTGGTTGAAATGATTACCAACCTCCAGt > 1:1079832/1‑149 (MQ=255) gAAGCCTAAAAAGAGGGGGCTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AACCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGtt < 1:1001243/149‑1 (MQ=255) taGCCTATAAAGAGTTTGTTATGCAACAGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGttt < 2:229765/148‑1 (MQ=255) cTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATcc > 2:1484608/1‑149 (MQ=255) ttaAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATcccc < 2:1050138/148‑1 (MQ=255) ataAAGAGTTTGTTATGCAACTGGCCTCGTGGGTGACCCGGAGAGCGGTCAGGCTGCAAACCGCCGATTAC‑AAACAGCGGAGGGTGGGCAACAGCAAAGCCGCTGCGGCGTTGCTGGATGAAATGAGTAACAACATCCTGTTTATcccc > 2:1026870/1‑149 (MQ=255) ataAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAACGCCGCATCGGCTTTGCt < 1:880769/115‑1 (MQ=255) ataAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAACGCCGCATCGGCTTTGCt > 2:880769/1‑115 (MQ=255) ataAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATcccc > 1:225381/1‑149 (MQ=255) taAAGAGTTTGTTATGCAACTGGCCACGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGCTGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCg > 1:245307/1‑149 (MQ=255) aaaGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACACCATCCAGTTTATCCCCgg > 1:1142173/1‑149 (MQ=255) aaaGAGTTTGTTATGCAACTGGCATCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACAGACTATTAC‑AAAAAGCTGAGGGTGGGCAACAGCAAAGCCTATGCGGCGTTGCTGGATGAAAGGATTAACAACCTCCAGTTTATACCCgg > 2:113429/1‑149 (MQ=255) aaGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGga > 2:61641/1‑149 (MQ=255) gagTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAAGAACATCCAGTTTATCCCCGgaga > 1:1263748/1‑149 (MQ=255) tttGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACtt < 2:1281844/149‑1 (MQ=255) ttGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACttt < 2:316899/149‑1 (MQ=255) ttGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACttt < 1:200559/149‑1 (MQ=255) tGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTTTTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACAGCCCGTTTATCCCCGGAGACTTTa > 2:501122/1‑149 (MQ=255) tGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTa > 1:1423618/1‑149 (MQ=255) cgTTATGCCCCTGGCCTCGTGGGACACCCGCAGCGAGTCCTGTCTGCAAACCGACTATTAC‑ACACAGCGGATGGTTGGCCACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTa < 1:1073351/148‑1 (MQ=255) cAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCcgcgc < 2:665828/149‑1 (MQ=255) aaCTGGCCTCGTGGGATTCCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCACCAGCAAAGCCGAGGCGGCGTTGCTGGATGAAATGATTCACAACGTCCAGTGTATCCCCGGAGACTTTCCCcgcgcg > 2:392957/1‑149 (MQ=255) aaCTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAACAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACTTCCAGTGTATCCCCGGAGCCTTTACCcgcgcg > 1:1397050/1‑149 (MQ=255) cGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGAc > 1:552000/1‑149 (MQ=255) gTGGGATACCCGCAGAGAGTTCTGGCTGCATACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTATCAAAATCCAGTTTATCCCAGGAGACTTTACCCGCGCGGTCAATGACa < 2:1451849/149‑1 (MQ=255) gATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGt > 1:1510446/1‑149 (MQ=255) aTACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTg > 2:915005/1‑149 (MQ=255) aTACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTg > 2:1206893/1‑149 (MQ=255) tACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGa < 1:1390136/149‑1 (MQ=255) cccGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAg < 1:871466/149‑1 (MQ=255) ccGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGc > 2:514478/1‑149 (MQ=255) agagagTTCTGGCTGCAAACCGACTTTTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTAt < 1:224490/149‑1 (MQ=255) agagagTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTAt < 2:1510446/149‑1 (MQ=255) agTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATGCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGcc < 1:1376757/149‑1 (MQ=255) ttCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGa > 1:1238448/1‑149 (MQ=255) cTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGaaa < 1:728252/149‑1 (MQ=255) cTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGaaa < 2:1182851/149‑1 (MQ=255) tGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCTGCGTTGCTTGTTGAAATGATTAAATACATCAAGTTTATCCACGGATACTTTACCCGCGCGTTCAATGACAGATTGAAGCTTATTGCAGAAAc > 1:1017927/1‑149 (MQ=255) gCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACcg > 2:1347745/1‑149 (MQ=255) gCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATAGCCGAAACCgcgc > 1:1560193/1‑149 (MQ=255) aaCCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATACCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTg > 2:1543273/1‑149 (MQ=255) ccGACTATTAC‑AAACAGCGGATGGTTGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGGCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGAc < 1:1501094/149‑1 (MQ=255) ccGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGAc > 2:487889/1‑149 (MQ=255) cGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACg > 2:703563/1‑149 (MQ=255) gACTATTACAAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACg > 2:576859/1‑149 (MQ=255) tATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCtaa > 2:262902/1‑149 (MQ=255) aTTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCtaat < 1:1347745/149‑1 (MQ=255) ttAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTTTCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTAATTGCCGAAACCGCGCCTGACGCtaata > 1:855547/1‑149 (MQ=255) c‑AAACAGCGGATGGGGGGCAACCTCAAAGCCGATGCCGCGTTGCTGGATGTAATGATTAACAACCTCCATGTTATCCCCGGTGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAAcc < 1:1484608/149‑1 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGCCTTTCCCCGCGCGGGCATGGCCAGCGTGAAGCTTATTGCCGAACCCGCGCATGCGGGTAATAcccg > 1:1448412/1‑148 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGaaa > 1:1141464/1‑127 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGaaa < 2:1141464/127‑1 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCTCCTGACGCTAATAACCt > 1:764578/1‑149 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCt > 1:1213498/1‑149 (MQ=255) aaaCAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGACAATGACAGCGTGAAGCTTATTGCCGACACCGCGCCTGACGCTAATAACCt > 1:1076866/1‑149 (MQ=255) cAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGtt < 2:552000/149‑1 (MQ=255) aGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTa < 1:98447/149‑1 (MQ=255) gCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCATTGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTAc < 1:557588/149‑1 (MQ=255) gCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTAc < 2:427862/149‑1 (MQ=255) ggATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGt > 2:1151397/1‑149 (MQ=255) ggATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGGCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGt < 2:771385/149‑1 (MQ=255) gATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGCAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTc > 1:1339345/1‑149 (MQ=255) gATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGCAACCGCGCCTGACGCTAATAACCTGTTACGTc > 1:580660/1‑149 (MQ=255) aTGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCa < 1:146160/149‑1 (MQ=255) ggtggGCAACATCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCAAATAACCTGTTACGTCAGt < 1:940735/149‑1 (MQ=255) ggtggGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGt < 1:278244/149‑1 (MQ=255) tggGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTAt > 2:356524/1‑149 (MQ=255) gggCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATg > 1:113810/1‑149 (MQ=255) ggCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGt < 1:61641/149‑1 (MQ=255) gCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGtt > 2:1324212/1‑149 (MQ=255) gCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGtt < 1:915005/149‑1 (MQ=255) gCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGtt < 1:1206893/149‑1 (MQ=255) cAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTg > 2:234121/1‑149 (MQ=255) tccAGCAACGCCGCATCGGCTTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCGGACGCTAATACCCGGGTACGTCAGTATGTTga > 1:1529311/3‑148 (MQ=255) aGCAACGCCGCATCGGCTTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCttt > 2:951201/1‑149 (MQ=255) gCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGAGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCtttt > 1:1417452/1‑149 (MQ=255) aaaGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTgc < 2:5996/149‑1 (MQ=255) aaGCAGATGCGGCGTGGCTGGATGAAATGATTAACAACATCCAGTTTATCCCAGGAGACTTTACCCGCGCGGTCAATGACAGCGTTAAGCGTTTTGCAGAAACCGCGCCATAGGCTTATTACCTGGTAGGTGAGTAGTTTGAGTTTgcc > 2:247219/1‑149 (MQ=255) | AACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTAC‑AAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCC > NC_000913/3969289‑3969576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |