| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 475,971 | C→G | 6.7% | intergenic (+20/+11) | ybaY → / ← ybaZ | outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 475,971 | 0 | C | G | 6.7% | 300.8 / 9.1 | 110 | intergenic (+20/+11) | ybaY/ybaZ | outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL |
| Reads supporting (aligned to +/- strand): ref base C (49/53); new base G (4/4); total (53/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
ACATTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACC > NC_000913/475823‑476117 | aCATTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTTAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGc < 2:859976/149‑1 (MQ=255)aCATTGGAGCCGGTACCGCACACCGCCGTGCCGGTTCAGGCCAGCGGGGGCGCAACGCCTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGc < 2:915236/149‑1 (MQ=255) aTTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGccc > 2:867699/1‑149 (MQ=255) aTTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGccc < 1:325398/149‑1 (MQ=255) ggTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGga < 1:994743/149‑1 (MQ=255) ggTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGga < 2:1401283/149‑1 (MQ=255) tGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGgaga > 1:1125769/1‑149 (MQ=255) gCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGGGCGGagag < 1:777542/149‑1 (MQ=255) cGGTACAGCAACCCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGGGCGGAGAggg < 2:668295/149‑1 (MQ=255) cGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTCCCGAACCTTCGACTTCACCACCTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTAAGCAATATTAAGCGACGTTAACCCTCTCCCCCCGGAGAggg < 1:726597/149‑1 (MQ=255) cGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAggg > 1:1502599/1‑149 (MQ=255) cGGTACAGCAAACCCCCGTGCCGGTGCAGGCCAGCGGGGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGCTCCAGCTCCTACCCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAggg < 2:268754/149‑1 (MQ=255) ggTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCTGCAGTGCCCGCTCGTACGCCATATTATGCGACGTTAACCCGCTCCGCCCGGGGAgggg > 2:275352/1‑148 (MQ=255) tACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGGGCGGAGAGGGTta < 1:1334804/149‑1 (MQ=255) cAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTtagt > 2:705801/1‑149 (MQ=255) aGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCACCTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCACTATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTtagta > 2:73304/1‑149 (MQ=255) gCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGTTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTtagtag > 2:1169825/1‑149 (MQ=255) cAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTtag > 2:522059/1‑145 (MQ=255) cAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTtag < 1:522059/145‑1 (MQ=255) aaCCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGGACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTc < 2:1131725/149‑1 (MQ=255) aCCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTcc > 1:32897/1‑149 (MQ=255) cgccgTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAg < 1:771366/149‑1 (MQ=255) cgccgTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAg < 1:477086/149‑1 (MQ=255) cgccgTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAg > 2:795622/1‑149 (MQ=255) cgTGCCGGTTCAGGCCAGGGGTGGCGCAACGACTCCCGTACCTTCGCCTTCACCAACACAGGAGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGa < 1:1151915/149‑1 (MQ=255) gTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGAt < 2:6762/149‑1 (MQ=255) gCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGCGGGTTAGTAGTTCCAGCGATaa > 1:1443640/1‑149 (MQ=255) gCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATaa > 2:243153/1‑149 (MQ=255) ccGGTTCAGGCCCCCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCATCTCAGGTGAATCCGTCTTCGGCAGCTCCATCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAAc < 2:1500208/149‑1 (MQ=255) ccGGTTCAGGCCAGCGGTGGCGCAACGAATACAGTACCTTAGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAAc > 1:1273299/1‑149 (MQ=255) cGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACg > 2:676160/1‑149 (MQ=255) tCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCGTCGGCAGGTCCCGCTCCTACGCATTATTAAGCGACGTTAACCCTCTCCGCCCGGAGCGGGTAAGTAGTTCCAGCGATACCGCGGc > 1:1473819/1‑149 (MQ=255) aGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGTTATCGCTGGaa < 1:31812/149‑1 (MQ=255) ggCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAg < 2:3495/149‑1 (MQ=255) gCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGt > 1:740605/1‑149 (MQ=255) gCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGt > 2:1219625/1‑149 (MQ=255) gCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGt > 2:1250418/1‑149 (MQ=255) gCCACCGGAGGCGCAACCACTACCGTACCTTCGACTTCACCACCTCACGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACCCAATATAAAGCGACGTTAACCCTCACCGCCCGGAGAGGGTTAGTAGTTCCCGCGATAACGCTGCAAGt < 2:708659/149‑1 (MQ=255) ccAGCGGGGGCGCAACGACTCACGTACCTGCGACTTCACCCACTCACGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGGAAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTc < 2:913490/149‑1 (MQ=255) ggTGGCGCAACGACTACCTTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGAttt < 1:1230699/149‑1 (MQ=255) tGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGc < 2:359113/149‑1 (MQ=255) tGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGc > 2:7728/1‑149 (MQ=255) gcgcAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGt > 1:712383/1‑139 (MQ=255) gcgcAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGt < 2:706844/139‑1 (MQ=255) gcACCGACTACCGTACCTTCGACTTCACCACCTCAGGGGAATCCGGCTTCGGCAGTTCCCGCTCCTACGCAATAGTAAGCGACGTTAACCCTCACCGCCCGGAGAGGGTTAGTAGTTCCAGGGATAACGCTGCAAGGCGATTTgcgcgc > 2:830532/1‑149 (MQ=255) gcAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCCGCTCCTACGCATTATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTGTGTAGTTCCAGGGATTACGCTGCAAGTCGATTTGCCCgg > 2:1037236/1‑148 (MQ=255) gcAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGc > 1:1180482/1‑149 (MQ=255) aaCGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATACGTCTTCGGCAGTTCCCGCTCCTACGCAATATTAAGCGAAGTTAACCCTCTCAGCCCGGTGAGGGTTAGTAGTACCAGCGATACCCGTGCAACTAGAGTAGCCCGCtg > 2:874649/1‑148 (MQ=255) aCGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCGGCTTc < 1:1492619/149‑1 (MQ=255) cGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTcc < 1:1007371/149‑1 (MQ=255) cGACTACCGTACCTTCGACGTCACCAACTCAGGTGAATCCGTCATCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTGCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTcc < 2:288760/149‑1 (MQ=255) cTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGAGACGTTAACCCTCTCCGCCCTGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGa < 2:1283097/149‑1 (MQ=255) aCCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTATGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATa < 1:415726/149‑1 (MQ=255) aCCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATa < 1:705801/149‑1 (MQ=255) aCCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTACGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATa < 1:1365788/149‑1 (MQ=255) gTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTCAGCGACGTTCACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCGGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCa < 2:885153/149‑1 (MQ=255) ttccTTCGACTTCACCAACTCAGGTGAATGCGTGTTCGGCAGTTCCAGCTCCTACGCTATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATATCGCTGCAAGTCGATTTGCCCGCTTCCCGATACCAt < 1:1415745/147‑1 (MQ=255) tACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCAt < 1:1169825/149‑1 (MQ=255) ccTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATca < 2:615828/149‑1 (MQ=255) tCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCacac < 2:824608/149‑1 (MQ=255) tCGACTTCACCAACTCAGGTGAATCCGTCGTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGCCGTTAACCCTCTCCGCCCGGAGAGGGGTAGTAGTTCCAGCGATGACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCccac > 1:1509371/1‑149 (MQ=255) ttCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCt > 1:118726/1‑149 (MQ=255) ttCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCt < 1:275599/149‑1 (MQ=255) cAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAg < 1:225033/149‑1 (MQ=255) aaCTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATACCGCTGCAAGTCGATTTGCCCGCTTCCCGATACGCTCACACCTTCTGCCAGt > 1:830368/1‑149 (MQ=255) cTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTaa > 2:42856/1‑149 (MQ=255) aGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATATGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTACTGc > 1:1555408/1‑149 (MQ=255) tGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTg < 2:28959/149‑1 (MQ=255) gAATCCGTCTGCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGt < 1:295419/149‑1 (MQ=255) cTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACg < 1:795622/149‑1 (MQ=255) cTTCGGCAGTGCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGTGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGTTACCATCACACCTTCTGCCAGTAATGCCTTTCGCTGACg < 1:1179468/149‑1 (MQ=255) cTTCAGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACg < 2:75283/149‑1 (MQ=255) ttCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAAAGCCTGTCGCTGACGc > 2:1491525/1‑149 (MQ=255) ggCAGTTCCAGCTCCAACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAACTCGATTTGCCCGCTTCCCGATACCATCCGACCATAAGCCAGTAATGCATGTCGCTGACGCTGt > 2:224961/1‑149 (MQ=255) gCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTa > 1:307401/1‑149 (MQ=255) gCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCAGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAACTCGATTTGCCCGCTTCCCTATACCATCACACATTCTGCCAGTACTGCCTCTCCCTGACGATGTa > 1:492904/1‑149 (MQ=255) tCCCGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGCTACCATCACACCTTCTGCCAGTACTGCCTGTCGCTGACGCTGTAAAtcc > 1:492709/1‑149 (MQ=255) gCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCAAACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAAtccggtc > 2:478248/1‑149 (MQ=255) gCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCAGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAAtccggtc < 2:1189441/149‑1 (MQ=255) tCCTACGCAATATTAAGCGACGTTAACCCTCTCCGGCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAAtccggtccg < 2:1286743/149‑1 (MQ=255) tCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAAtccggtccg > 1:591924/1‑149 (MQ=255) tACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGCCGCTGTAACTCCGGTCCGGtt > 1:729593/1‑149 (MQ=255) aCGCAATATTAAGCGACGTTCACCGTCTCCGCCCGGCGAGGGTTAGTAGTTCCAGCGATAACGCTGCACGTCGATTTGCCCGCTTCCCGATACCATCCCACCTGCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTa < 1:275352/149‑1 (MQ=255) aGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGCCGCTGTAAATCCGGTCCGGTTAGCGAAATtgtg > 2:839945/1‑149 (MQ=255) aGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATtgtg < 2:1502599/149‑1 (MQ=255) aGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATtgtg < 2:1273299/149‑1 (MQ=255) aGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTCCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATtgtg > 2:281351/1‑149 (MQ=255) tactAACCCTCTCCGGGCGGTGAGGGTTAGTAGTTCCAGCGATAACGCTGCACGTCGAGTTGCCCGCTTCCCGATACCATCACGCCTTCTGCCAGGAGTGCCTGTCGCTGCCGCTGTAAATCCGGTCCGGTTAGCGATATTGTGCGGTg > 1:1285830/4‑149 (MQ=255) cGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTg < 1:250662/149‑1 (MQ=255) gTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTgg > 2:359653/1‑149 (MQ=255) ttACCCCGCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATATGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATCCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGc < 2:1022023/149‑1 (MQ=255) aCCCTCTCCGGGCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGAt > 2:1288698/1‑149 (MQ=255) aCCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGAt > 2:1398390/1‑149 (MQ=255) aCCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGGCCGGTTAGCGAAATTGTGCCGTGGCGAt < 1:332651/149‑1 (MQ=255) cccTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTCCAAGTCGATTTGCCCGCTTCCCGATTCCATCACACCTTATGACAGTAATGACTGTCGCTGACGATGTAAATCCGGTCCGGTTAGAGAAATTGTGCAGTGGCGaat > 1:312116/1‑147 (MQ=255) cccGCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGAtt < 1:867699/149‑1 (MQ=255) ccTCTCCGGGCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGATAGCGAAATTGTGCCGTGGCGATTa > 1:155744/1‑149 (MQ=255) tctcCACCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAac > 1:127620/1‑149 (MQ=255) cGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAaccacc < 1:73304/149‑1 (MQ=255) cGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATATTGACGTGTCGATTAaccacc > 1:1493767/1‑149 (MQ=255) | ACATTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAAGCGACGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATACCATCACACCTTCTGCCAGTAATGCCTGTCGCTGACGCTGTAAATCCGGTCCGGTTAGCGAAATTGTGCCGTGGCGATTAACCACC > NC_000913/475823‑476117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |