| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 985,854 | A→T | 5.6% | intergenic (‑145/+40) | aspC ← / ← ompF | aspartate aminotransferase, PLP‑dependent/outer membrane porin 1a (Ia;b;F) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 985,854 | 0 | A | T | 5.6% | 252.7 / 2.6 | 96 | intergenic (‑145/+40) | aspC/ompF | aspartate aminotransferase, PLP‑dependent/outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base A (53/37); new base T (3/3); total (56/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
ATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTT > NC_000913/985708‑986001 | aTGACGATGTTACATTCTGGTTACAGTAGTGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAATTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCaaa < 2:361323/149‑1 (MQ=255)aTGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCaaa > 2:1207968/1‑149 (MQ=255) gACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGt > 1:1078355/1‑149 (MQ=255) gAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACAAAAGTCCt > 1:900423/1‑149 (MQ=255) ggTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGt > 1:832314/1‑149 (MQ=255) gTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGCCCAAAGTCCTGtt > 2:311614/1‑149 (MQ=255) tCCATTATGGTTACAGAAGTGAAGTCAGAAATCAGGGTAACGGGAGATTTACAAAAATCCAACTATTACTTATGAAAACGAATGCTGTTTTTTCAATCCGTGAGAATGCTCTTGAAGGTATAAAAAAAACAGGACCAACGTCCTGtttt < 1:1292960/149‑1 (MQ=255) tCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGtttt < 1:72216/149‑1 (MQ=255) tCCATTATGGTTACAGAAGGGAAGTCCGCAATCAGGGTACCGGGAGATATACAAACTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACTTTGGTCCTGtttt < 2:410925/149‑1 (MQ=255) ccATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACTTTGGTCCTGttttt < 2:497108/149‑1 (MQ=255) cATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGtttttt > 1:870859/1‑149 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACTTTGGTCCTGttttttt < 2:1506884/149‑2 (MQ=255) tGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAAGTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCGCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGct > 2:1384409/1‑148 (MQ=255) tGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCa < 2:55131/149‑1 (MQ=255) gTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCAtt < 1:1274334/149‑1 (MQ=255) gTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCAtt > 1:1094593/1‑149 (MQ=255) ttACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACGATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGAAttt > 2:644417/1‑149 (MQ=255) cAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAAc < 1:105411/149‑1 (MQ=255) cAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAAc < 2:379022/149‑1 (MQ=255) cAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACa < 1:737100/149‑1 (MQ=255) aGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACa > 1:804773/1‑149 (MQ=255) gggAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAaga > 1:762079/1‑149 (MQ=255) ggAAGTCCGCTATCAGGGTAACGTGAGATTTACAAAATTCCAACTATTAATGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAagag < 1:133770/149‑1 (MQ=255) ggAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACACAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCTGCATTTAACAAagag > 2:721756/1‑149 (MQ=255) gTCCGCTATCAGGGTAACGGGAGAATTACAAAATTCCAACTATTACTGATGAAACCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGgtgt < 2:1493087/149‑1 (MQ=255) aTCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTAGGCAATTAACAAAGAGGTGTGGTAttt > 2:720812/1‑148 (MQ=255) cAGGGTCACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGTTGTGCTATTAGa > 2:296082/1‑149 (MQ=255) gggTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAAc > 2:1253496/1‑149 (MQ=255) gTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTg < 1:429662/149‑1 (MQ=255) cGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCTGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaa > 2:300135/1‑149 (MQ=255) gggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCTGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaaa < 1:998755/149‑1 (MQ=255) gggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaaa < 1:650672/149‑1 (MQ=255) cagaTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCATGTTATTTCGGCATTTAACAAAGAGATCTGCTATTAGAACTGGTAAACg > 2:700911/2‑149 (MQ=255) tttACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATAcc < 1:1369365/149‑1 (MQ=255) tACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCTTTTAACAAAGAGGTGTGCTATTAGAACTGGTTAACGATAccc > 2:124895/1‑149 (MQ=255) aCAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaaa < 1:134950/140‑1 (MQ=255) aCAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTaaa > 2:134950/1‑140 (MQ=255) aCAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACAAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCca < 2:832314/149‑1 (MQ=255) aaaaTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCcaca > 1:1216576/1‑149 (MQ=255) aaaaTTCCAACTATTACTGATGAAAACGCAGGCTG‑TTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTTCTATTAGAACTGGTAAACGATACCCACAg > 2:1313456/1‑149 (MQ=255) aaaTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAg > 1:754398/1‑149 (MQ=255) cAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGGTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACgg > 2:1547085/1‑149 (MQ=255) cAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAActg > 2:412036/1‑147 (MQ=255) aaCTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGgt < 2:1078355/149‑1 (MQ=255) aCTATTACTGATGTAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAAAGgtg < 2:903630/149‑1 (MQ=255) cTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGACCTGTTTTTTCGGCATTTAACAATGAGGTTTGCTATTATAACTGGAAAACGATACCAACAGCAACGgagt > 1:245670/1‑149 (MQ=255) tATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtc < 1:300135/149‑1 (MQ=255) tATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCCGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGgagta > 1:521797/1‑148 (MQ=255) tttcTGATGAAAACGCACGCTGTTTTTGAAAGAAGTGAGATTGCTCTGGAAGGTATAAAAAATACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtcgt < 2:1082165/146‑1 (MQ=255) tACTGATGAAAACGCAGGCTGTTTTTGCAACACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGACCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtcgta > 2:1253865/1‑148 (MQ=255) gatgaACACGCCTGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAATGTATAAAAAAAACAGGACCAAAGTCCTGTTTATTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGaa < 2:792351/149‑1 (MQ=255) atgaAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCAAAATCAACGGAGTCGTCTGAAc > 1:1460779/1‑149 (MQ=255) aCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGc > 1:738685/1‑149 (MQ=255) gCAGGCTGTTTTTGCAAGACGTGAGATTGCACTCGAAGGTATAAAAAAAACAGGACCAAAGAACTGTTTTTTCGGCATATAACAAAGAGCTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGCTGTCGTCTGAACATACTccc > 2:1191581/1‑149 (MQ=255) aGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAg > 1:553528/1‑149 (MQ=255) aGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAg > 2:1312426/1‑149 (MQ=255) gCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAACACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACATAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACCGCAACGGTGGCGTCTGAACCTACGCCCAGtt < 2:1112414/149‑1 (MQ=255) gCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGtt > 2:592616/1‑149 (MQ=255) tttttGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAATTCATGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttgtt < 2:1040220/149‑1 (MQ=255) tggCAAGACGTGAGATTGCTCTGGAAGGTTTAAAAAAAACAGGACCAAAGGCCTGTTTTTTCGGCATTGACCAAAGAGGTGCGCTATTCTACCTGGTCAACGATACCCACAGCACCGGTGTCGTCTGAACCTACGCCCAGTTTGATGTc < 2:1010227/147‑1 (MQ=255) ttcatgACGTTAGTTTGCGATGGATGGTTTAAAAAATACAGGTGCATTGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTTGAACTGGTAAACGATACCCACTGCTACGGTGTCGTCTGAAGGTAGGCCCAGTTTTTTGTCa < 2:116813/144‑1 (MQ=255) gCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAg > 2:31313/1‑149 (MQ=255) cAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGa > 1:757364/1‑149 (MQ=255) aaGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAATCGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGat > 2:1545792/1‑148 (MQ=255) aaGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGaa < 2:553528/149‑1 (MQ=255) cGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGa > 2:1330166/1‑149 (MQ=255) gTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGTTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGAt < 1:721756/149‑1 (MQ=255) ctGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGAt < 2:1434574/148‑1 (MQ=255) gagaTTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAATAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCt > 2:1534968/1‑149 (MQ=255) gagaTTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCt > 1:1204801/1‑149 (MQ=255) gagaTTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCt < 1:788689/149‑1 (MQ=255) gaTTGCTCTGGAAGTTATAAAAAAAACAGGCACAAAGTACTGTTTTTTCGGCATTTAACAAAGAGGTGTGATATTATAACGGGTAAACTATACCCACAGAAACGGTGTCGTCTGAACCTAATCCCAGTTTGTTGTCAGAATCGATCTgg < 2:900423/149‑1 (MQ=255) tttctctGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGtt < 1:777334/146‑1 (MQ=255) ctctGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCCCAGCAACGGTGTCGTCGGTACCTACGCCCAGTTTGTTGTCAGAATCGAGCTGGTtgag > 1:1010426/1‑148 (MQ=255) tctGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGGTTTTTCGGCATATAACAAAGAGGTGTGCTATTAGAACTGGTAATCGATACCCCCAGCAACGGTGTCGTCTGACCCTACGCCCAGTTTGTTGTCAGAATCGCTCTGGTtgatg > 1:474392/1‑149 (MQ=255) gtGGAAGGTATAAAAAAAACAGTACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGATATTAGAACTGGTAAACGAGACCCACAGCACCGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatta < 1:508574/148‑3 (MQ=255) tGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTTGTAgattat > 2:338994/1‑149 (MQ=255) gAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGt > 1:450318/1‑149 (MQ=255) aaGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTa < 2:870859/149‑1 (MQ=255) gTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGTCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCACAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGta > 2:1486045/1‑148 (MQ=255) ataAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAGCCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCaa > 1:142272/1‑149 (MQ=255) ataAAAAAAACAGGACCAAAGTCCTGGTTTTTCGGCATTTAACAAAGAGGTGTCCTATTAGAACTGGTAAACTATACCCACAGCAACGGTGTCGTCTGAACCTACGCCGAGTTTGTTGACAGATTCGATCTGGTTGATGATGTAGTaaa > 1:1099127/1‑149 (MQ=255) taAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAAc < 1:296082/149‑1 (MQ=255) taAAAAAAACAGGACCAAAGTCCGGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTGTGAACCAAAGCCCAGTTTGGTGTCAGAATAGATCTGGTTGATGATGTAGTCAAc > 2:329762/1‑149 (MQ=255) cgaaaaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACCAAGAGGTGTGCTATTAGAACTGGGAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGCTCTGGTTGATGATGTAGTCAACa > 1:901278/3‑149 (MQ=255) aaaaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAAAAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACa > 1:496693/1‑149 (MQ=255) gaaaaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCACCGGTGTCGTCTGATCCTACGCACAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTcatcat > 1:1194636/2‑149 (MQ=255) aaaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACAt > 1:507982/1‑149 (MQ=255) aaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATa > 2:1405369/1‑149 (MQ=255) aaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGGTGATGATGTAGTCAACATa > 2:1133664/1‑149 (MQ=255) aaaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACACACAGCAACGGTGTCGTCAGAACCTACGCCCAGTTTGTTGTCAGAAGCGATCTGGTTGATGATGTAGTCAACATAg > 2:471677/1‑149 (MQ=255) aaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAg < 2:762079/149‑1 (MQ=255) aCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTgg < 2:757364/149‑1 (MQ=255) aCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTgg > 1:605469/1‑149 (MQ=255) aCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTgg < 1:587513/149‑1 (MQ=255) gACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACAt > 1:464064/1‑149 (MQ=255) gACCAAAGGCCTGTTTTTTCGGCATTTACCAAAGAGGTTTGCTATTAGACCTGGTAAACGATACCCACAGCAACGGCGTCGGCTGAACCTACGCCCAGTTTGTTGTCAGTATCGATCTGGATGATGATGTAGTCAACATAGGTGGACAt < 1:575717/149‑1 (MQ=255) cAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGATTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGAGGACATGtt > 1:1252733/1‑149 (MQ=255) | ATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTT > NC_000913/985708‑986001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |