| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 915,213 | A→T | 12.7% | intergenic (‑356/+139) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 915,213 | 0 | A | T | 12.7% | 266.5 / 11.3 | 123 | intergenic (‑356/+139) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base A (75/26); new base T (2/15); total (81/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATT > NC_000913/915065‑915353 | cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAt < 2:3771773/150‑1 (MQ=32) ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAC‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAt‑t < 2:1887485/150‑1 (MQ=17) ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAt‑t < 2:112981/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑Tg < 2:3234682/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑Tg < 1:110212/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑Tg < 2:1910374/150‑1 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑Tg < 2:1845883/150‑1 (MQ=32) gCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgc < 1:217068/150‑1 (MQ=32) gCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTCACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgc < 2:3577259/150‑1 (MQ=17) gCCCACCTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgc < 2:185200/150‑1 (MQ=17) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgc < 1:3249302/150‑1 (MQ=32) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgc > 1:372529/1‑150 (MQ=32) gCCCACATCCATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgc > 2:3322037/1‑150 (MQ=17) gCCCACAGGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGGTACCGCGCGCCCGACCCGGTAGCCGTAAGGGATAC‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgc < 1:1247452/150‑1 (MQ=255) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgcc > 1:1598147/1‑150 (MQ=32) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgcc > 1:2887995/1‑150 (MQ=32) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGgccgcc > 1:2888309/1‑150 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGcccc < 2:3216345/150‑1 (MQ=32) cacaGGGTTGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGcccc < 1:2092602/150‑1 (MQ=17) ggATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑Tgcg > 2:53672/1‑150 (MQ=32) ggATGTGGGCTGAGGGCGCGTTTTAAAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAA‑TGGCCGCCCCC‑Tgcg > 2:53595/1‑150 (MQ=17) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTccat > 2:3012395/1‑148 (MQ=17) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCtt > 1:2059347/1‑150 (MQ=32) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTccgt > 1:3756487/1‑148 (MQ=17) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTCCtt > 2:1455653/1‑150 (MQ=17) tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTgc > 1:3156206/1‑150 (MQ=32) tttttACTGGGTTGTTACCTCGCGCCCGACCGGGTAGCGTTATGGTATAT‑GTCGTGGCCACCGCGCTGCGGCTTTTTTTTACGCAAGAGCCCGGGGGTGCGGGGGGCGGCGGCTTT‑GGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGc < 2:579695/149‑1 (MQ=2) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGc > 2:2579567/1‑150 (MQ=33) ttttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCT‑TGGCCGCCCCC‑TGCGCGCGCCATGCGCCCGTGGCa > 1:338800/1‑150 (MQ=255) ttttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCa > 1:2446567/1‑150 (MQ=34) ttttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTCCATGCGCCAGTGGCa > 1:2739283/1‑150 (MQ=21) tttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCaa > 2:775605/1‑150 (MQ=35) ctggtttGTTCCCTGGCGCCCGACCCGGTCGCCGT‑TGGGTTAACGTGGTGGGCACCGCGCAGCGGCGTTTTTGTTCGCCCGCGCCGGGGGGTGCCGGGGGCGGCGGCGTT‑GGGCCGCCCCC‑GGCGCGCTCCTTGCGCCAGTGGCAATATg < 2:2526672/144‑1 (MQ=2) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGt > 1:253428/1‑150 (MQ=39) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTACATGCGCCAGTGGCAATATGt > 1:1897433/1‑150 (MQ=255) ggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGGGGCGTT‑TTGCCGCCCCC‑TGGGCGCTCCTTGCGCCAGTGGCAATATGTTg > 2:1373214/1‑150 (MQ=255) ttACCTCGCGCCCGACCGGTTCGCGTTATGGTCAAA‑GTCGGGGGCACGGCGCCGCGGCTTTTTTTTTCGCCAGGGCCGGGGGGTGCCGGGGGGGTGGGCGTT‑TGGCCGCCCCC‑TCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg < 2:1647926/150‑1 (MQ=9) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTTTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGGGAT‑TGGCCGCCCCC‑AGCGCGCTCCTTGCGCCAGTGGCAATAAGTTGCATAg > 1:3402687/1‑150 (MQ=14) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTAGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TTGCCGCCCCC‑AGCCCGCACCCTGCGCCCGTGGCAATAATTTGCTTAg > 1:3402647/1‑150 (MQ=14) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGc > 2:3735356/1‑150 (MQ=255) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTc > 2:728090/1‑150 (MQ=255) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:371296/1‑150 (MQ=255) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCGTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:371253/1‑150 (MQ=255) tCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCag > 1:3879567/1‑149 (MQ=255) tCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCCGTGGCAATATGTTGCTTAGCTCAt > 1:3879605/1‑150 (MQ=255) tCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTCCGTGCGCCCGGGGCAATATGTTGCTTAGCTCAt > 1:1812638/1‑150 (MQ=255) ccgcgCCCCACCCGGTTGCGGTACGGTTTTC‑GTGGGGGCCACCGCGCTGGGGGTTTTTTTTTCGCCAGCGCCGGGGGGGGCTGGGGGCGGGGGGTTT‑GGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAt < 2:3805790/149‑1 (MQ=12) cgcgCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATg > 2:3549649/1‑150 (MQ=255) cgcgCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATg > 2:776079/1‑150 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAG‑TGGCCGCCCCC‑AGCGCGCTCCTTGCGCCCGTGGCAATATGTTGCTTTGCGCCTGAAAg > 1:3679929/1‑150 (MQ=14) cGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 1:2284225/1‑150 (MQ=255) gACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAg > 2:3050960/1‑150 (MQ=255) gACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAg > 2:3817314/1‑150 (MQ=255) gACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCACCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAg > 1:3775347/1‑150 (MQ=255) ggTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑GGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCACCGGAAAGGAGCGcaa > 2:3697319/1‑150 (MQ=255) gTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaac > 2:3581451/1‑150 (MQ=255) ccGTACGGTATAC‑GTGGAGGGCACCGCGACGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAga < 2:3604670/150‑1 (MQ=18) gTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCATGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg > 2:1924740/1‑150 (MQ=255) gTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCCAT‑TGGCCCCCCCC‑TGCGCGCGCCTTTCGCCACTGGCAATAATTTTCTTATCTCATTCAAGGAGCGCAACAAgaat > 1:146865/1‑148 (MQ=17) tAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGGAGGGGGCGGCGGCGTT‑TGGGCGCCCCC‑TGCGCGCTCCTTGCGGCAGTGGCAATTTGTTGGTTTGCTGATGTTAGGTGCGCAACAAgattt > 2:105784/1‑148 (MQ=14) tAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCGCCTTGCGCCACTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatga > 1:3816009/1‑150 (MQ=255) ggATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGaa > 2:3529613/1‑150 (MQ=255) ggATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCGCCATGCGCCCCTGGCAAAAATTTGCTTAGCTAATGAAAGGAGCGCAACAAAATTATGaa > 1:2695989/1‑150 (MQ=17) ggATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCG‑CCCC‑TGCGCGCTCCTTGCCCCAGTGGCAAAAAGTTTCTTATCTCATGAAAGGAGCGCAAAAAGAATATGAAt > 2:2835342/1‑150 (MQ=17) acgccgtgggCACCGCGCCGCGGCTTTTTTTTTCGCCAGAGCCGGGGGGTGCTGGGGGCGGCGGCGTT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa < 2:1997124/143‑1 (MQ=18) tCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCT‑TGGCCGCCCCC‑AGCGCCCGCCCTGCGCCCCTGGCAAAATGTTTCATATCTCAGGGAAGGAGCGCAACAAGAAGAATAATAAACaa > 1:3529964/1‑149 (MQ=14) tCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCCCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGAAGATGAATCAACat > 2:3015331/1‑150 (MQ=255) aCCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaac > 2:813808/1‑150 (MQ=255) aCCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCATGAGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCCACAAGATGATGAATCAACAAATaacaac > 2:813836/1‑150 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACAt > 2:1735789/1‑150 (MQ=255) cgcggcgTTTTTGTTCGCCAGCGCCGGGGGGTGCTGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaa < 2:3956706/149‑1 (MQ=255) ggggcttttttGTTCGCCTGAGCGGGGGGGGGGGGGGGGGGGCGGCTTT‑GGCCCGCCCCC‑CGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaa < 1:3289126/143‑1 (MQ=255) gggcttttttttTCGCCAGAGCGGGGGGGTGCTGGGGGCGGCGGCTAT‑GGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaa < 2:3868980/144‑1 (MQ=25) gcgATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGACTCAACATATAACAACATCTTaaaaaa > 2:928315/1‑150 (MQ=255) tttttttGTTCGCCAGTGCGGGGGGGTGCGGGGGGGGGGGGCTTT‑GGCCCGCCCCC‑GGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaaa < 2:2759414/147‑1 (MQ=255) cttttttGTTCGCCAGCGCCGGGGGGTGCTGGGGGGGGGGGCGAT‑TGGCGGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaaa < 2:2130842/147‑1 (MQ=25) gtttttGTTCGCCAGAGCCCGGGGGTGCTGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg < 2:2972112/148‑1 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 2:122623/1‑150 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 2:464054/1‑150 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 2:122581/1‑150 (MQ=255) ttttttTCGCCTGCGCCGGGGGGTGCGGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc < 2:3920946/150‑1 (MQ=25) ttttGTTCGCCAGAGCCCGGGGGTGCAGGGGGTGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc < 2:883642/150‑1 (MQ=255) ttttGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACAGATAACAACATCTTAAAAAAAGGc > 2:2743181/1‑150 (MQ=255) gCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACAtt > 2:698874/1‑150 (MQ=255) ccAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCATGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAAAATCTTAAAAAAAGGCCTGAAATTa > 2:1469379/1‑150 (MQ=255) cAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑GGGCCGCCCCC‑TGCGCGCTCCGTGCGCCAGGGGCAATATGTTGCGTAGCTCATGACAGGAGCGCAACAAGATGAAGCAGCAACATATCACAACATCTTCCAAAAAGGCCTGAccgtcc > 2:3519878/1‑145 (MQ=18) cAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAG‑TGGCCGCCCCC‑TGCGCGCGCCTTGCGCCCGGGGCAAGATGGTGCGTCGCGCCGGAAAGGAGCGCACCAAGATGAGGACTCAACCTAGAACACCCGCTTACAAAAAGGCCTGACagtcc > 2:3519876/1‑146 (MQ=12) gggggggggggTGGTGGGGGGGGTGGTTTT‑TGGCCGCCGAC‑GGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGATCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc < 2:3402687/144‑1 (MQ=255) ttgcggggggTGTGGGGGGGGGGGGGGTTGTGGCCCCCCCG‑GGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc < 2:3402647/145‑1 (MQ=255) cgcgggggggTGGTGGGGGGGGGGGGTTT‑GGGCCCCCCCC‑TCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGcc < 2:3720223/145‑1 (MQ=255) ccGGGTGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAgg > 2:2610340/1‑150 (MQ=255) cGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑AGCGCGCTCCTTGCTCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGAAGATGAATCAACAAATAACAACAACTTAAAAAAAGGCCTGACATTACGCCAGGc > 2:1436878/1‑150 (MQ=37) gggTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt > 1:2391853/1‑150 (MQ=255) gggggggggggggGCGGT‑GGGCCCCCCCCGGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATGTAACAACATCTTAAAAAAAGGCCTGGCGTAATGTCAGGCCttttt < 2:1159784/147‑4 (MQ=255) cAGGGGGCGGCGGCGAG‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg > 1:1497719/1‑150 (MQ=255) ggggggggCGGCGTT‑GGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt < 2:2887995/150‑1 (MQ=255) gggCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaa > 1:3331629/1‑150 (MQ=255) ggggcggccAA‑TCGCCGCCGCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt > 2:251787/3‑150 (MQ=255) ggggcggccAA‑TCGCCGCCGCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt > 1:3530897/3‑150 (MQ=255) gcgggggcgAT‑TGGCCGCCCCC‑GGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt < 2:1288777/150‑1 (MQ=255) | CGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAA‑GTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAT‑TGGCCGCCCCC‑TGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATT > NC_000913/915065‑915353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |