| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,594 | T→G | 5.2% | intergenic (+60/‑136) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,594 | 0 | T | G | 5.2% | 675.7 / 2.1 | 259 | intergenic (+60/‑136) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (61/178); new base G (12/8); total (73/186) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
AAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGA > NC_000913/164445‑164743 | aaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGt > 2:9828039/1‑150 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgg > 1:10383707/1‑148 (MQ=255) tGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggccca > 2:5771373/1‑143 (MQ=255) aaaGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctca < 2:10063433/150‑1 (MQ=255) aaaGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGAGAGGGCATCCGCGCGCACGTtcacccacc > 2:11005171/1‑147 (MQ=255) ggCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTgggcccccacccc > 1:8406921/1‑149 (MQ=38) tttATCCCAAACTGGGGGGGCGGGACGACCGGGAAAATACTGCACCGACGCGAGGGACTAAAAAGTATTGTTATGGTTGGTTTTCTCCCTCCCCCTGTGGTTGAGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAAc < 2:9790605/149‑1 (MQ=255) gTTATCCCAACCATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGATGAAAAAGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCCTCAGCGCGCCCGTTCACCCTCACCCTAAc < 2:1452506/150‑1 (MQ=38) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCGCACCCAAAcc > 1:1764662/1‑150 (MQ=255) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCCCCCACACCCCAAcc > 2:7942323/1‑150 (MQ=255) taaacccAAACATGACTCCCCCTACGACCCCCCAAAAACCCCACCCACCCCACGCACCAAAAACTATTCGAAAGGTTGGATTACACCCACACCCTGTGGCAGAGGCCCGGGGTGAGGGCAACACCGCCCACGTTCACCCTCACCCTAAcc < 2:7240832/146‑1 (MQ=255) aaaCATGTCTGGCAGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTAACCCACAACCAAAaccacacac > 1:6623919/1‑144 (MQ=37) aTGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTCTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTGCACCCGCACCCtcaccctcacccgccc > 2:11122598/1‑146 (MQ=38) tGTCTGGCCGGACGACCCGGCAAATACTGCCCCGACGCGACGGACGAAAAAGTATTCTTATGGTTGGTTTTCTCCCTCTCCCGGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCTCGTTCACCCTCACGCTAACCCTCTCCCTCAAg < 2:8216097/150‑1 (MQ=38) tCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTCGTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGGGAGGGCATCAGCGCGCACGTGCACCCGCACCCGAACCCCCACCCACACggg > 2:4793137/1‑150 (MQ=37) tCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCCGCGCGCACGTTCGCCCACACCCACACCCACACCCGCAAggg > 2:7901970/1‑150 (MQ=37) ggCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACTAAAATTTTTTGGTATGGTTGTTTTTCTCCCTCGCGCTGTGGTCGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 1:9157925/150‑1 (MQ=255) ggCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCACCCTCTCCCGGTGGGTGTGGGCCGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 2:821401/150‑1 (MQ=255) gcgggccgacCCGGCAAATCCTGCACCGCCGCGACGGACGAAAAAGTTTTCGTATGGTTGGTTTTCTCCCTCGCCCGGTGGGAGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgagat < 2:5423386/144‑2 (MQ=255) ccGGACGCCCCGCAAAATCCTCCACCGCCGCGCCGCACTAAAATTTTTGCTTTTGGTTGGTTTCCCCCCTCTCCGTGTGGGAGTGGGCGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGGAGAgg < 1:6398284/150‑1 (MQ=255) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCGCACCCAAAACCACACCCCCCAgggggggg > 1:1202921/1‑145 (MQ=25) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGGCACCCACACCCTAACCCACACCCCCCAgggggcgg > 2:4507393/1‑145 (MQ=37) cGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTACGGTTGGTGTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGGGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAggg < 2:5843079/150‑1 (MQ=255) cgacCCGGCAAATACTGCACCGACGCTCCGGACTACAAATTATTCGTATGGTTGGTTTTCTCCCTATCCGGGTGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGAcc < 2:5692465/150‑1 (MQ=255) gacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGGCACAAACCCGAAACCACAACCAAAAGGGAGATGGGAcag > 1:5630358/1‑148 (MQ=25) ccGGCAAAACCACCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 2:9692227/150‑1 (MQ=38) ccGGCAAAAACTGCACCGACGCGAGGGACGAAAAAGTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 2:6451638/150‑1 (MQ=255) cGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCCCACCCCAAACCACAACCCCAACGGCGAGGGGGcccaaag > 2:4322513/1‑145 (MQ=25) cGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCGCACCCAAACCCTCTCCCCCAACGGGGGGGGGGCCgcgcg > 2:7364037/1‑146 (MQ=37) gaaaaTCCTGCCCCGACGCGCCGGACTAAAAATTATTCGTAAGGTTGGTTTACTCCCTCGCCCTGTGGTAGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:6783149/148‑1 (MQ=255) gCAAATACTGCACCGACGCGACGGACGAAAAAGTGTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGGCCCGCACCCACAACCCCACCCCCACCGGGGAGGGGGCCgggaggg > 1:2340931/1‑144 (MQ=21) aaaTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCCCACCCAAAACCACACCCGCACGGGGGGTGGGGCCCATCGAGcc > 1:4633865/1‑149 (MQ=25) aaaTACTGCACCGACGCGACGCACTAAATTTTATTCGTATGGTTGGTTTTCCCCCACCCCCTGTGGGTGTGGGCGGGGTTGAGCGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGca < 1:10829495/150‑1 (MQ=255) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCGAACCCTCGACCCCCAGGGCGAGGGGGCCGATCGAGCAC‑‑ACAt > 2:7283855/1‑150 (MQ=37) ccccgccgCTACGCACTAAAATTTTTTCGTCCGGTTTTTTTTCCCCCCCCCCGTGTGGGCGGGGGGGGGGGTGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAAtttt < 1:7439/148‑1 (MQ=255) cACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCGCACCCGAACCCACTCCCACAAGGGCGAGGGGGCCGAGCGAGcac‑‑acaattg > 2:7299431/1‑144 (MQ=37) ccgccgCGACGGCCGAAAAATTATTGGTAGGGTTGGTTTTCTCCCTCCCCGGGTGGGTGCGGGCGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTga < 2:5231854/150‑1 (MQ=255) ccGACGCGCCGGACTAAAAAGTTTTCGTCCGGTTGGTTTTCTCCCTCTCCCTGGGGGAGAGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTga < 1:9889806/150‑1 (MQ=255) ccGACGCGACGTACTAAAATTTATTCTTATGGTGGTTTTCCGCCCTCTCCCTGTGGGTGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTga < 1:6938040/150‑1 (MQ=37) ccGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCAAACCCAAAACCACACACACAAGGGGGAGGGGGCCGAAAGAGCCC‑‑AAAatttta > 1:9098699/1‑148 (MQ=21) gcgacgTACTAAAATGTTTTCTTTTGGTTGTTTGTCTCCCTCTCCGTGTGGTTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGat < 1:4287811/150‑1 (MQ=255) gcgacgGACTAAAAAGTATTCGTAAGGTTGGATTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGat < 1:9973545/150‑1 (MQ=255) gcgacgGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCGCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGat < 2:10056570/150‑1 (MQ=255) acggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATAtc < 2:10905445/150‑1 (MQ=255) gggactAAAATTTATTCTTATGGTTGTTTTTCTCCCTCTCCGTGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATAtct < 2:8706149/149‑1 (MQ=255) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGGCCCGCCCCCAAAACCACGACCGCCAGGGGGGGGGGGGCGGGCGGGCACAAAAATTTTGAGatatatt > 2:10525351/1‑149 (MQ=12) gacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATAtcttc < 2:7068672/150‑1 (MQ=255) gacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCCAACCCAAACCCACCAGGGAGAGGGGTCCCATACAGCAC‑‑AAAATTTTAGAGATAtattc > 2:9303307/1‑150 (MQ=25) gaccAAAATGTTTTCTTACGGTGGGTTCGCCCCCTCGCCGGGGGGGTGCGGGCGGGGGGTCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATAtcttc < 1:3016227/150‑1 (MQ=255) gAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGAATCAGCGCGCACGTTGACCCACACCCAAAACCAAAACCCCAAGGGAGGGGGGCCCGAGCGACCCC‑‑AAAGTGTTTGAGATAacttattc > 2:3098820/1‑150 (MQ=16) gTATTCTTACGGTTGGTGTTCTCCCGCGCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCtt < 1:8127041/150‑1 (MQ=39) tttCTTACGGTGGGTTTACTCCCTCTCCCGGTGGGTGTGGGCGGGGGTGTGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGt < 2:9405387/149‑1 (MQ=255) atgcGTACGGTGGGTTTTCTCCCTCCCCCTGTGGGAGTGGGCGGGGGGGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGt < 2:1071062/147‑1 (MQ=255) tCGTATGGGTGTTTTACTCCCACTCCCGGTGGTAGAGGGCCGGGGTGCGGGACTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTaa < 2:373888/150‑1 (MQ=255) cGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAAc < 1:10083126/150‑1 (MQ=255) ttttggttgtttTTCTCCCTCGCCGGGGGGGTGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:8384/146‑1 (MQ=255) gtttggtgggttTGCTCCCTCGCCGGGGGGGTGGGGGCGGGGGGGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 1:9501670/146‑1 (MQ=255) gTACGGTTGGTTTTCTCCCTCGCCCTGTGGGAGCGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:21645/150‑1 (MQ=255) gTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCCAACCCACTCCCCCAAGGGCGAGGGGACCCATAGAGCAC‑‑AAAAATTGATAGATATCTTCTTCTGTCTTGTAAcc > 2:11013837/1‑149 (MQ=37) ttgtttgtttTCCTCCCTCTCCGTGTGGTTGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACaga < 1:4030417/146‑1 (MQ=255) atggttgtttTCCCCCCTCGCCGTGGGGTTGGGGGGGGGGGTGTGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACaga < 1:532092/148‑1 (MQ=255) ggttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaag < 2:6455074/150‑1 (MQ=255) gttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCCCCCTCACCCTAACCCTCTCCCTCAAGGGGGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTTACagaaga > 1:711465/1‑150 (MQ=255) tgggttTTCTCCCTCTCCCTGTGGGCGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAgaagaa < 1:3423140/148‑1 (MQ=255) tggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAAc < 2:2793564/150‑1 (MQ=255) gtgttCGCCCTCCCCCGGGGGGAGCGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAg < 2:3451114/147‑1 (MQ=255) gccctctcggtGTGGGTGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATc < 2:7645810/149‑1 (MQ=255) ccctctccctGTGGGAGAGGGCCGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAACTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCg < 2:6974794/150‑1 (MQ=255) ctctccctGTGGGTGTGGGCCGGGGTGCGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCggg < 1:1817178/150‑1 (MQ=255) tctccctGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCTCCCGCACCCACACCCTCTCCCACAAGGGGGTGGGGCCCGGTCGAGCAC‑‑AAATTTTTAGAGATATAATATTAGGTCTTGTAACAGAAGGACAGTAAATCGGGc > 2:2680202/1‑150 (MQ=21) cctGGGGGTGTGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCtttt < 1:10720002/150‑1 (MQ=255) tgggtgggGGCGGGGGTGCGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc < 2:6835720/150‑1 (MQ=255) ggtgtgggCGGGGGTGGGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt < 2:3217462/145‑1 (MQ=255) ggAGAGGGCCGGGGTGAGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCACTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt < 1:1051648/150‑1 (MQ=255) agagGGCCGGGGTGCGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGa < 2:1743938/150‑1 (MQ=255) cgggCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAat < 1:7580389/149‑1 (MQ=255) gggCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAata < 1:11131818/150‑1 (MQ=255) ggCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCGAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTGGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAatat < 2:8884760/150‑1 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCCCACCCAAAACCAAAACCCCAACGGAGAGGGGACCGAACGAGCCC‑‑CAAGTTTGTGAGATATATTGATATGTGTTGTTACAGAACAACACTCAAACGGGCGTTTGCGccggcagat > 2:2572252/1‑143 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTGAACCCACAACCGAAACCACACCCACAAGGGGGAGGGGGCCCATCGCGCAC‑‑AAAAATTGAGTGATATAATATTAGGTGATTTAAAACAAGAAAATAAAAAAGGGCGATTGCGCCTGGatat > 2:3598108/1‑150 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCCCACCCGAACCCGCTCCCGCCAGGGCGAGCGGCCCCCTCCCGCCC‑‑CAATGGTGAGAGATAAATTCTTCTGGCGGGGAACAGCAGAACCGCACAGCGGGCGGTTGCGCCGGacgag > 2:10122746/1‑146 (MQ=255) gCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATAtt < 1:10189294/150‑1 (MQ=255) cGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 1:7653905/150‑1 (MQ=255) cGGGGTGAGGGCCTCCGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 2:8997430/150‑1 (MQ=255) ggggTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGGAGAACTGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:5110124/150‑1 (MQ=255) ggggTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:11005171/150‑1 (MQ=255) ggggTGCGGGCCTCAGCGCGCACGTTCACCCTCACGCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:7557684/150‑1 (MQ=255) ggggTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:5923829/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:8331718/150‑1 (MQ=255) ggTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 2:8106545/150‑1 (MQ=255) ggTGAGGGCCTCAGCGCGCACGTGCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCCGAATATTGCGga < 2:1202587/150‑1 (MQ=255) tGAGGGCATCAGCGCGCACGTGCACCCACCCCCCAACCCACGCCCCCCACGGAGCGGGGCCCCCGCGAGCAC‑‑AAAATTTGGGGGATATATTCATCGGTCTTGTAACACAAGAACAGCAAATACGGCGGTTGCGCCCGCATATTGCGggga > 2:2613292/1‑150 (MQ=255) cgcACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCgg < 2:2285871/150‑1 (MQ=255) cgcACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGAACGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGTAGAAAAAGCATGGCCgg < 1:1485868/150‑1 (MQ=255) cACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGa < 1:588296/150‑1 (MQ=255) aCGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGaa < 1:4112752/150‑1 (MQ=255) cGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAAt < 1:9051238/150‑1 (MQ=255) gTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATGTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATg < 2:8856373/150‑1 (MQ=255) ttCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGa < 1:6204488/150‑1 (MQ=255) ttCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGa < 1:10006682/150‑1 (MQ=255) | AAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCAC‑‑AAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCATGGCCGGGAATGA > NC_000913/164445‑164743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |