BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 374929	79 (1.200)	14 (0.240)	6/170	NT	16.4%	intergenic (+48/‑530)	mhpE/mhpT	4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter
*	?	NC_000913	= 377521	NA (NA)	14 (0.240)	6/170	NT	16.4%	noncoding (187/187 nt)	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP32 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 133 total aligned reads displayed.

TATTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGA  >  NC_000913/374791‑375067

tatTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTg                                                                                                                                           >  1:23942‑M1/1‑139 (MQ=255)

tatTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTg                                                                                                                                           >  1:24067‑M1/1‑139 (MQ=255)

tatTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTg                                                                                                                                           >  1:24924‑M1/1‑139 (MQ=255)

   tctcGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccg                                                                                                                                        >  2:872588‑M1/1‑136 (MQ=255)

        ttGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgc                                                                                                                                   >  2:1057234‑M1/1‑131 (MQ=255)

        ttGAGCTGGGCAAACGCCGGAGGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgc                                                                                                                                   >  2:661393‑M1/1‑131 (MQ=255)

        caaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacacttcgcccataaaccgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcGCACGACTGCCGGATgc                                                                                                                                   >  1:425777‑M1/124‑140 (MQ=255)

          gAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcgg                                                                                                                                 >  1:506504‑M1/1‑129 (MQ=255)

               gggCATACGCCGGATGGTGGGCGGCCTGGAGGATATGATCTCTGACGTGGCGCTGGTTCTGCGCAACAACAAATAATGCTGTCTGCCGAGACCGTGCATTTTGAAGGCCCATCCCAGCTCGACTGCCGGATGCGGCGTGa                                                                                                                            <  2:1631515/140‑1 (MQ=255)

               gggCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtga                                                                                                                            <  1:442463‑M1/140‑17 (MQ=255)

               gggCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtga                                                                                                                            <  2:517737‑M1/140‑17 (MQ=255)

                ggCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaa                                                                                                                           >  1:1370275‑M1/1‑123 (MQ=255)

                ggCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCAGTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgac                                                                                                                           >  2:1042408‑M1/1‑123 (MQ=255)

                ggCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGAACTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaa                                                                                                                           >  2:479218‑M1/1‑123 (MQ=255)

                     aCGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgcct                                                                                                                      >  1:1407094‑M1/1‑118 (MQ=255)

                        ccGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGATAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttat                                                                                                                   <  2:458250‑M1/140‑26 (MQ=255)

                        ccGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttat                                                                                                                   <  1:647124‑M1/140‑26 (MQ=255)

                        ccGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttat                                                                                                                   <  1:172218‑M1/140‑26 (MQ=255)

                         cGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatc                                                                                                                  <  1:1624020‑M1/140‑27 (MQ=255)

                              ggTTGGCGGCCAGGAGGATTTGTTCGTTGCCGTGGCGCTGGATCTGCGCAACAACACAGCCTGCTGACTGCCGAGAACGTGCATTGTGTCTGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcc                                                                                                             <  2:1680828‑M1/140‑32 (MQ=255)

                                 tGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctac                                                                                                          >  2:665779‑M1/1‑106 (MQ=255)

                                 tGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCAGTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccgtatccggcctac                                                                                                          >  2:665674‑M1/1‑106 (MQ=255)

                                    cggcCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGa                                                                                                       <  1:530411/140‑1 (MQ=255)

                                    cggcCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGa                                                                                                       <  1:530062/140‑1 (MQ=255)

                                         aggaggATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCg                                                                                                  <  2:1278387/140‑1 (MQ=255)

                                         aggaggATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCg                                                                                                  <  2:1278391/140‑1 (MQ=255)

                                         aggaggATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCg                                                                                                  <  2:1527806/140‑1 (MQ=255)

                                         aggaggATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCg                                                                                                  <  2:1618553/140‑1 (MQ=255)

                                          ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgccc                                                                                                 <  2:1469498‑M1/140‑44 (MQ=255)

                                          ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgccc                                                                                                 <  2:1469612‑M1/140‑44 (MQ=255)

                                          ggaggaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgccc                                                                                                 <  2:753854‑M1/140‑44 (MQ=255)

                                              gaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACTAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgaga                                                                                             <  2:786215/140‑1 (MQ=255)

                                              gaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgaga                                                                                             >  1:945138/1‑140 (MQ=255)

                                              gaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgaga                                                                                             >  1:945227/1‑140 (MQ=255)

                                              gaTATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTgaga                                                                                             <  1:273676/140‑1 (MQ=255)

                                                   gATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTg                                                                                        <  2:228375/140‑1 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcc                                                                                   >  1:1233845‑M1/1‑83 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   <  2:623185/140‑1 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   >  1:134536/1‑140 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   >  1:666080/1‑140 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   >  1:185210/1‑140 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   >  1:925733/1‑140 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGt                                                                                   >  1:185185/1‑140 (MQ=255)

                                                        ttGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATGTGTAgga                                                                                   >  2:729956/1‑139 (MQ=255)

                                                         tGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTc                                                                                  >  1:741995/1‑140 (MQ=255)

                                                         tGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTc                                                                                  >  1:1378209/1‑140 (MQ=255)

                                                           aCGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGTCTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGGGTGTGAATTTGTAGGTCTg                                                                                >  1:163553/1‑140 (MQ=255)

                                                              tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataa                                                                             <  2:703431‑M1/140‑64 (MQ=255)

                                                              tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataa                                                                             <  2:1233845‑M1/140‑64 (MQ=255)

                                                              tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataa                                                                             <  2:703357‑M1/140‑64 (MQ=255)

                                                              tGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATa                                                                             >  1:388022/1‑140 (MQ=255)

                                                               tccggtctacacttcgcccataaaccgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGTGGCGCGAGAATTTGTAGGCCTGATaa                                                                            >  1:322825‑M1/69‑140 (MQ=255)

                                                               ggCGCTGGATCTGCGCAACAGCAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataag                                                                            <  2:736180‑M1/140‑65 (MQ=255)

                                                               ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataag                                                                            <  1:1465114‑M1/140‑65 (MQ=255)

                                                               ggCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATaa                                                                            <  1:1240008/140‑1 (MQ=255)

                                                                gcgcTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAg                                                                           <  2:270402/140‑1 (MQ=255)

                                                                 cgcTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagac                                                                          <  2:135983‑M1/140‑67 (MQ=255)

                                                                 cgcTGGATCTGCGCAACAACAAATAATGATGACTGACGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGa                                                                          <  2:868197/140‑1 (MQ=255)

                                                                           gcgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCg                                                                >  2:138672/1‑140 (MQ=255)

                                                                            cgcccataaaccgtaggcctgataagacgcgcatagcgtcgcatcaggcatctgcGCACGACTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGCGCGGGAATTTGTAGGCCTGATAAGACGCGTTAGCGt                                                               <  2:1016195‑M1/85‑1 (MQ=255)

                                                                            cgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGt                                                               <  1:500038/140‑1 (MQ=255)

                                                                            cgcAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGt                                                               <  1:154357/140‑1 (MQ=255)

                                                                              caacaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCg                                                             <  2:494089/140‑1 (MQ=255)

                                                                                acaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCa                                                           >  2:137455/1‑140 (MQ=255)

                                                                                acaacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGAAGGTCTGATAAGAc                                                                         >  2:951317/1‑126 (MQ=255)

                                                                                 caacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCAt                                                          >  1:611169/1‑140 (MQ=255)

                                                                                 caacaaATAATGATGACTGCCGAGAACGTGCAATTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCAt                                                          <  2:537477/140‑1 (MQ=255)

                                                                                  aacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatc                                                         <  2:786735‑M1/140‑84 (MQ=255)

                                                                                  aacaaATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatc                                                         <  2:863439‑M1/140‑84 (MQ=255)

                                                                                        taatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCAt                                                   <  2:611169/140‑1 (MQ=255)

                                                                                         aatGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCAtg                                                  >  2:1092596/1‑139 (MQ=255)

                                                                                           tgatgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTg                                                >  1:1007000/1‑140 (MQ=255)

                                                                                             atgaCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTgcg                                              <  2:480521/140‑1 (MQ=255)

                                                                                                aCTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCAc                                           >  1:1283131/1‑140 (MQ=255)

                                                                                                aCTGCCGAGAACGTGCATTTTGTATGACCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCAc                                           >  1:1114248/1‑140 (MQ=255)

                                                                                                   gCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGCCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGAc                                        >  1:262345/1‑140 (MQ=255)

                                                                                                     cGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTg                                      >  1:138698/1‑140 (MQ=255)

                                                                                                             ttcATTTTGTATGCCCATCCCAGCAAGACTGCCGGATGCGGCGTGAACGACTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGTTCTGATAAGACTCGTTAGAGTCGCATCAGGCATCTGCGCACGACTGCCGGATgc                              <  1:804644/138‑1 (MQ=17)

                                                                                                              gCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                             >  1:555078/1‑140 (MQ=255)

                                                                                                              gCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                             >  1:555056/1‑140 (MQ=255)

                                                                                                              gCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATgcg                             <  1:1449138/140‑1 (MQ=255)

                                                                                                              agcgtcgcatcaggcatctgcGCACGACTGCCGGATgc                                                                                                                                   >  2:217959‑M1/22‑38 (MQ=255)

                                                                                                              agcgtcgcatcaggcatctgcGCACGACTGCCGGATgc                                                                                                                                   <  1:217959‑M1/17‑1 (MQ=255)

                                                                                                                   ttGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                        <  1:847149/140‑1 (MQ=255)

                                                                                                                   ttGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                        <  2:945227/140‑1 (MQ=255)

                                                                                                                   ttGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTg                        <  1:362464/140‑1 (MQ=255)

                                                                                                                    tGTCTGCCCAACCCAGCACGAATGCCTTATTCTTCTTGAACGCCTTTTCCGGCCTCCGGTTGGCGTGAGAATTTGTATGTCTGTTTATACGCGTTAGCGTCGCATCAGGCATCTGCGCACGTCTTCCGGATGCGGCGTGa                       <  2:1117728/140‑1 (MQ=9)

                                                                                                                    tGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                       <  1:22574/140‑1 (MQ=255)

                                                                                                                    tGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGa                       <  1:911851/140‑1 (MQ=255)

                                                                                                                       aTGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACg                    >  1:1379307/1‑140 (MQ=255)

                                                                                                                       aTGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACg                    >  1:1211947/1‑140 (MQ=255)

                                                                                                                        tGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGc                   >  1:87196/1‑140 (MQ=255)

                                                                                                                              tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc             <  2:87196/140‑1 (MQ=255)

                                                                                                                              tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc             >  1:1066393/1‑140 (MQ=255)

                                                                                                                              tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc             >  2:517878/1‑140 (MQ=255)

                                                                                                                              tCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATc             >  1:780217/1‑140 (MQ=255)

                                                                                                                               cccAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATcc            <  2:961369/140‑1 (MQ=40)

                                                                                                                                  aGCACGACTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtc         >  2:1263649‑M1/1‑9 (MQ=255)

                                                                                                                                         cTgccggatgcggcgtgaacgccttatccggcctacacttcgcccgtaagccgtaggcctgataagacgcgcaaagcgtcgcatcaggcatggcgcacgactgccggatgcggcgtgaacgccttatccggtctacactt  <  1:1332794‑M1/140‑139 (MQ=255)

                                                                                                                                         atGCCGGATGCGGCGTGAACGCATTATCCGGCCTACGGTTGGCGTGAGTATTTGTAGTTCTGATAAGACGCGTTAGCGTCGGATCGGGCATCTGCGCTCGCAGGCCGGATGCGGCGTGGACGCCGTATCCGGCCTACGGa  >  2:663456/2‑140 (MQ=11)

TATTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAATGATGACTGCCGAGAACGTGCATTTTGTATGCCCATCCCAGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGATGGCGTGAGAATTTGTAGGTCTGATAAGACGCGTTAGCGTCGCATCAGGCATCTGCGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGA  >  NC_000913/374791‑375067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.