BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3231254 =	NA (NA)	3 (0.040)	3/204	NT	6.0%	noncoding (3/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	3234722 =	47 (0.660)	3 (0.040)	3/204	NT	6.0%	noncoding (85/86 nt)	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 121 total aligned reads displayed.

CCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGT  >  NC_000913/3231115‑3231391

ttgccaaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcc                                                                                                                                           >  1:1585768‑M1/140‑140 (MQ=255)

ttgccaaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcc                                                                                                                                           <  2:1459438‑M1/1‑1 (MQ=255)

ttgccaaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcc                                                                                                                                           <  1:1258783‑M1/1‑1 (MQ=255)

 tgccaaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCg                                                                                                                                          <  2:263777‑M1/2‑1 (MQ=255)

   ccaaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGa                                                                                                                                        <  1:526592‑M1/4‑1 (MQ=255)

    cgATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAATGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGAt                                                                                                                                       >  1:796443/1‑140 (MQ=255)

    cgATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGAt                                                                                                                                       >  1:416899/1‑140 (MQ=255)

    cgATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGAt                                                                                                                                       >  2:1412119/1‑140 (MQ=255)

    cgATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCACATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGAt                                                                                                                                       >  2:236370/1‑140 (MQ=255)

     aaccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATg                                                                                                                                      <  2:361231‑M1/6‑1 (MQ=255)

       ccgtcacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATgcg                                                                                                                                    >  1:1520214‑M1/133‑140 (MQ=255)

           cacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGt                                                                                                                                <  2:1323280‑M1/12‑1 (MQ=255)

           cacctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGt                                                                                                                                <  2:1023996‑M1/12‑1 (MQ=255)

            cAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTa                                                                                                                               <  1:267224/140‑1 (MQ=255)

            cAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTa                                                                                                                               <  2:461264/140‑1 (MQ=255)

            cAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGA‑TTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTaa                                                                                                                              <  2:325991/140‑1 (MQ=255)

            acctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTa                                                                                                                               >  2:853147‑M1/128‑140 (MQ=255)

            acctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTa                                                                                                                               >  2:775749‑M1/128‑140 (MQ=255)

            acctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTa                                                                                                                               >  2:72233‑M1/128‑140 (MQ=255)

            acctggattacttccataaactgaagaagaatttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTa                                                                                                                               >  1:561633‑M1/128‑140 (MQ=255)

             cctggattacttccataaactgaagaagattttcggcaactgcaccactattgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTaa                                                                                                                              >  1:1609596‑M1/127‑140 (MQ=255)

                       aaTTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATc                                                                                                                    <  1:198884/140‑1 (MQ=255)

                       aaTTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATc                                                                                                                    <  1:869237/140‑1 (MQ=255)

                       aaTTACAACCCACTGACAGGCGCACAGCAAGGCGCACCAAATGTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATc                                                                                                                    <  2:1011633/140‑1 (MQ=255)

                        tccataaactgaagatgattttaggcaactgcacccatagtgcgacgaataataaatttgtggtactgaaagcggtgaagctgggtcttcgtcggttagattgggagttacctgcCGGATGCGGCGTAAACGCCTTATcc                                                                                                                   >  2:1659182‑M1/116‑140 (MQ=255)

                         ttACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTGTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGGTATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCg                                                                                                                  >  2:1219725/1‑140 (MQ=255)

                         ttACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCg                                                                                                                  <  1:1487683/140‑1 (MQ=255)

                              aCCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                             >  1:589647/1‑140 (MQ=255)

                              aCCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                             <  2:492817/140‑1 (MQ=255)

                              aCCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATGTGTAAATGTTGTATAACGATTTTATCCGTAAGCAATAATTAGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                             >  1:542863/1‑140 (MQ=255)

                               cccGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                                                            <  2:183833/140‑1 (MQ=255)

                               cccGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                                                            <  2:309821/140‑1 (MQ=255)

                               cccGCTCACAGGCGCACAGCAAGGCGCACCAAATATCTCCTGGAGTGCCGCGCATTTCTATATGTAGTATAACGATTTTTTCCGTAAGCAATAAATTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                                                            <  1:1058268/140‑1 (MQ=39)

                                  gCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAATCGCCTTATCCGCCCTACAtg                                                                                                         >  2:559913/1‑140 (MQ=255)

                                  gCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                                                         <  1:147980/140‑1 (MQ=255)

                                   cTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                                                        >  1:767508/1‑140 (MQ=255)

                                     gACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATATCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                                                                      <  2:344640/140‑1 (MQ=255)

                                      aCAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                                                                     <  1:359141/140‑1 (MQ=255)

                                       cAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACCTGTGCaa                                                                                                    <  2:556821/140‑1 (MQ=255)

                                       cAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCaa                                                                                                    <  2:556874/140‑1 (MQ=255)

                                       cAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCaa                                                                                                    <  1:528420/140‑1 (MQ=255)

                                       cAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCaa                                                                                                    <  1:23789/140‑1 (MQ=255)

                                       cAGGCGCACAGCAAGGCGCACCAAATTTCGCCTGGAGTGCCGCGCATTTGTATCTGTTGTATACCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCaa                                                                                                    <  1:1050465/140‑1 (MQ=255)

                                           cgcACAGCACGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTAGAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcct                                                                                                >  2:890744/1‑140 (MQ=255)

                                                aggaaGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTgg                                                                                           <  1:902977/137‑1 (MQ=255)

                                                aGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTgg                                                                                           <  1:1278724/140‑1 (MQ=255)

                                                    aGGCGCTCCAAATTTCTCCTGGAGTGCCGCGCATTTGTATAGGTTGTATAACGATTTGTTCCGTTAGCAATTATTTGCTACTGCTGGCGGGTGCGGCGGTTTCGCCTTATCGGCGGTTCGTGTGCAAGCGTGCTGGGCgg                                                                                       >  2:1528692/1‑140 (MQ=255)

                                                    aGGCGCACCAAATTTCTCCGGGAGTGCCGCGCAGTTGGATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                                       >  1:438128/1‑140 (MQ=255)

                                                     ggCGCACCAATTTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTTTCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                                      <  1:1186523/140‑1 (MQ=255)

                                                     ggCGCACCAAATTTCTCCTGGAGTGCAGCGCATTTGTATCTGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                                      <  1:558377/140‑1 (MQ=255)

                                                          aCCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaaa                                                                                 >  1:1319148/1‑140 (MQ=255)

                                                          aCCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaaa                                                                                 >  1:1478375/1‑140 (MQ=255)

                                                                tgcgacgaataataaatttgtggtactgaaagcggtgaagctgggacgtcgtcggtaagattgggagttacctgcCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                           >  1:1023996‑M1/76‑140 (MQ=255)

                                                                 ttCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCa                                                                          <  2:1092345/140‑1 (MQ=255)

                                                                 ttCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCa                                                                          <  2:1421787/140‑1 (MQ=255)

                                                                             gCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                              <  2:1439316/140‑1 (MQ=255)

                                                                             gCCGCGCATTTGTATATGTTGTATAACGATTTTTTACGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACTCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                              <  1:1534640/140‑1 (MQ=255)

                                                                              ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTCAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCg                                                             >  1:204344/1‑140 (MQ=255)

                                                                                        ctataTGTTGTATAACGATTATTTCCGTAACCAATAATTTGCAACTGCTGGCGGATGCCGCGTAAACCCCTTATCCGCACTACAAGTGCAATCCTCCTGGCCGGATAAAACGCGGCAATCGTAGCATCCGGCAACTGCAc                                                   <  2:784448/139‑1 (MQ=255)

                                                                                              gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                             >  1:821177/1‑140 (MQ=255)

                                                                                                tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  1:912223/1‑140 (MQ=255)

                                                                                                tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  1:470880/1‑140 (MQ=255)

                                                                                                tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  1:705049/1‑140 (MQ=255)

                                                                                                tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  1:32458/1‑140 (MQ=255)

                                                                                                tgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  2:1104701/1‑140 (MQ=255)

                                                                                                tgtATAACGAATTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTCAACGCCTTATCCGCCCTACATGTTCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAc                                           >  1:1370757/1‑140 (MQ=255)

                                                                                                  tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                                         >  1:233567/1‑140 (MQ=255)

                                                                                                  tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                                         >  2:1304528/1‑140 (MQ=255)

                                                                                                  tataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                                         >  1:317066/1‑140 (MQ=255)

                                                                                                   ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                                        <  2:754180/140‑1 (MQ=255)

                                                                                                   ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                                        <  2:1309974/140‑1 (MQ=255)

                                                                                                   ataACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                                        <  2:1120070/140‑1 (MQ=255)

                                                                                                     aaCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAATCGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                                      >  2:1391419/1‑140 (MQ=255)

                                                                                                            ttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcgg                               >  1:800716/1‑140 (MQ=255)

                                                                                                                ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                           <  1:119417/140‑1 (MQ=255)

                                                                                                                ccGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                           <  1:236370/140‑1 (MQ=255)

                                                                                                                   tAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAAc                        <  1:42975/140‑1 (MQ=255)

                                                                                                                   tAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAAc                        <  1:285469/140‑1 (MQ=255)

                                                                                                                     aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGc                      <  2:1180897/140‑1 (MQ=255)

                                                                                                                           tatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  2:1071581/139‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  1:1666360/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  2:906533/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  1:833487/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  2:203687/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  2:1495395/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  1:1207507/140‑1 (MQ=255)

                                                                                                                           aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc                <  2:751649/140‑1 (MQ=255)

                                                                                                                             tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg              <  1:516724/140‑1 (MQ=255)

                                                                                                                             tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg              <  2:796443/140‑1 (MQ=255)

                                                                                                                             tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg              <  1:517840/140‑1 (MQ=255)

                                                                                                                             tttGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg              <  2:1131169/140‑1 (MQ=255)

                                                                                                                             tatGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACCTGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCg              <  2:1533051/138‑1 (MQ=255)

                                                                                                                               tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc            <  2:407625/140‑1 (MQ=255)

                                                                                                                               tGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc            <  1:1616461/140‑1 (MQ=255)

                                                                                                                                  aaCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTa         >  2:130608/1‑140 (MQ=255)

                                                                                                                                   aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTAc        <  2:1463994/140‑1 (MQ=255)

                                                                                                                                     tgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAt      <  2:1560761/140‑1 (MQ=255)

                                                                                                                                         ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt  >  1:1655035/1‑140 (MQ=255)

                                                                                                                                         ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt  >  1:781524/1‑140 (MQ=255)

                                                                                                                                         ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtgt  >  1:780964/1‑140 (MQ=255)

CCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGT  >  NC_000913/3231115‑3231391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.