| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,528,988 | G→A | 5.2% | A419V (GCG→GTG) | sgcC ← | putative PTS system EIIC permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,528,988 | 0 | G | A | 5.2% | 273.4 / 3.8 | 77 | A419V (GCG→GTG) | sgcC | putative PTS system EIIC permease component |
| Reads supporting (aligned to +/- strand): ref base G (37/36); new base A (2/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
AATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGT > NC_000913/4528850‑4529126 | aaTGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGc < 1:1454557/140‑1 (MQ=255) gTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCACCACGACa > 2:257892/1‑140 (MQ=255) gTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCACCACGACa > 2:258293/1‑140 (MQ=255) aGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAAc < 1:266227/140‑1 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc > 1:661247/1‑140 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc > 1:83500/1‑140 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc > 2:1501803/1‑140 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc > 2:1501402/1‑140 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc < 1:812153/140‑1 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc < 1:489016/140‑1 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc < 1:1330946/140‑1 (MQ=255) tGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGc < 1:811872/140‑1 (MQ=255) gCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACAt < 2:1394160/140‑1 (MQ=255) gCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACAt < 2:297131/140‑1 (MQ=255) gCTTTTTCCGTCCCAATAACCTCATTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACAt < 1:1208329/140‑1 (MQ=255) ccGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCa > 2:200890/1‑140 (MQ=255) ccGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTAATCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCATTAATCCCAAGCGACATCAATTCa > 2:749847/1‑140 (MQ=255) ccGTCCCAATAACCTCTATCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCa > 2:749769/1‑140 (MQ=255) gTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGa > 2:1572927/1‑140 (MQ=255) tCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGaa > 2:746183/1‑140 (MQ=255) ccAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAAt > 1:852839/1‑140 (MQ=255) tAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGAc < 1:287406/140‑1 (MQ=255) tAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGAc < 2:537432/140‑1 (MQ=255) tAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGAc < 1:342691/140‑1 (MQ=255) ctctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAAc < 2:1442872/140‑1 (MQ=255) ctctCAGCCACCTCATTGAAAGTACTCCTTATTCCGATAATGAACGTTTACGTAAGAACAGCCCGACGCTGGCGACAATCCCGACCGCCACGACAACGCCAATAATCCCAAGCGACCTCAATTCAGACATCGACCAACCg < 2:1301462/137‑1 (MQ=255) ctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg > 1:250410/1‑140 (MQ=255) ctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCg < 1:1344891/140‑1 (MQ=255) tttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGa > 2:307501/1‑140 (MQ=255) ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCTCGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGaa > 2:805779/1‑140 (MQ=255) ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGaa > 2:673876/1‑140 (MQ=255) ttCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTAAGAAATCGACCAACCGaa > 2:673870/1‑140 (MQ=255) ccAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACatat < 2:1304935/140‑1 (MQ=255) cAACTCATTGAAAGTACTCCTTATTCCGATAATTAACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATAtt < 2:1014792/140‑1 (MQ=255) tCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGccc < 1:648307/140‑1 (MQ=255) tCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGccc < 1:248781/140‑1 (MQ=255) tGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACgg > 1:880984/1‑140 (MQ=255) gAAAGTACTCCTTCTTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGa < 1:415198/140‑1 (MQ=255) gAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGa < 1:1639343/140‑1 (MQ=255) aGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACaa > 1:1407556/1‑140 (MQ=255) gTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACTGACAAc > 2:26153/1‑140 (MQ=255) gTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAAc > 2:26494/1‑140 (MQ=255) gTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAAc > 2:26374/1‑140 (MQ=255) cTCCTTCTTCCGATACTTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCTAGCGACATCAATTCAGAAATCGACGAACCGAACATATTGCCCACGGACAACGCt < 2:1207068/140‑1 (MQ=255) cTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCTCGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCt < 1:891914/140‑1 (MQ=255) cTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCTAACAAATAGACCACGGACAActca > 1:1668138/1‑137 (MQ=255) cTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCt < 1:610525/140‑1 (MQ=255) cTCCTTATTCCGATAATTCACGATTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCt < 1:34088/140‑1 (MQ=255) tCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACAGACCGCCACTACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTg > 2:862927/1‑140 (MQ=255) tATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGAt > 1:1012313/1‑140 (MQ=255) tCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTg > 2:1614698/1‑140 (MQ=255) gATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTgcgc > 1:1362839/1‑140 (MQ=255) aTAATTCACGTTTACGTAAGTACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCa > 2:715733/1‑140 (MQ=255) aTAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCa > 2:490819/1‑140 (MQ=255) aTAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCa > 2:490888/1‑140 (MQ=255) tAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCAc > 1:857572/1‑140 (MQ=255) tAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCAc > 1:856750/1‑140 (MQ=255) tAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCAc > 1:854807/1‑140 (MQ=255) tCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTc < 2:354322/140‑1 (MQ=255) gTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAAGTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCg < 1:454982/140‑1 (MQ=255) ttACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGc < 1:1334582/140‑1 (MQ=255) ttACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGc < 1:1334576/140‑1 (MQ=255) ttACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGc < 1:1138195/140‑1 (MQ=255) cGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCaaa > 1:1446660/1‑140 (MQ=255) cACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGc > 2:26496/1‑140 (MQ=255) cACGACGCTGGCGACAAAACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGc > 2:981548/1‑140 (MQ=255) cTGGCGACAATACCGACCACCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAg < 1:257892/140‑1 (MQ=255) cTGGCGACAATACCGACCACCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAg < 1:258293/140‑1 (MQ=255) gCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAgcgc > 1:345189/1‑140 (MQ=255) gACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCa < 2:80969/140‑1 (MQ=255) gACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCa < 2:591183/140‑1 (MQ=255) aaTACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCAttt < 2:358355/140‑1 (MQ=255) aaTACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATACAGAACTCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCAttt < 2:1644928/140‑1 (MQ=255) aaTACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAAATCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAATCTGAAGCCGCGGGTGAGCGCCAgtt > 2:1337606/1‑140 (MQ=255) aaTACAGACCGCCACGAAAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACGTTCACCGGCAATACTGAAACCGCGTTTGAGCGCCCttg > 2:1337607/1‑139 (MQ=255) tACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGACATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCa < 2:661247/140‑1 (MQ=255) tACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAACTCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCa < 1:60119/140‑1 (MQ=255) cgaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGATCATATTTCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTg < 1:1616218/140‑1 (MQ=255) cgaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTg < 1:314405/140‑1 (MQ=255) cgaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTg > 2:721860/1‑140 (MQ=255) cgaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCAACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTg < 2:1238811/140‑1 (MQ=255) gaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCGTTTGAGCGCCATTTctggga > 1:1348587/1‑135 (MQ=255) gaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGa > 1:1173091/1‑140 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGTGCGCCATTTCAGTGaa > 2:803630/1‑140 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGaa > 1:84149/1‑140 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGaa > 2:1238240/1‑140 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGaa > 1:1114024/1‑140 (MQ=255) cgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATACTGCCCACGGGCAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGt < 2:56719/140‑1 (MQ=255) | AATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGT > NC_000913/4528850‑4529126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |