| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,650,199 | C→A | 11.8% | E697* (GAA→TAA) | yfhM ← | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,650,199 | 0 | C | A | 11.8% | 273.6 / 15.4 | 90 | E697* (GAA→TAA) | yfhM | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (52/27); new base A (6/5); total (58/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCTATAGCCAGCCCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCATCGCTATA > NC_000913/2650061‑2650334 | aGCTATAGCCAGCCCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCg > 2:120416/1‑140 (MQ=255) cTATAGCCAGCCCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGAt < 2:189936/140‑1 (MQ=255) taGCCAGCCCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAg < 1:379158/140‑1 (MQ=255) ccacccCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGATTCGTCCGCTTTCAGATCCAGAGTTTGTACATTTTCGATCAGATc > 2:926795/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGTCGATAAGCGCCCCACACAACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATGTGCGGGCAGATCtgtt > 2:466912/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCtttt > 2:1195139/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCtttt > 1:822539/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCtttt > 1:1007013/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCtttt > 1:324180/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCtttt > 1:271022/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGGTTGTTCATTTTCGATCAGATCtttt > 2:394376/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTACGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCtttt > 2:21221/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTACGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCtttt > 2:21126/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTACGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCtttt > 2:21289/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTACGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCtttt > 2:22145/1‑140 (MQ=255) cccAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTACGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCtttt > 2:22177/1‑140 (MQ=255) aaCACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACt > 2:1572751/1‑140 (MQ=255) cacTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACtgt < 1:787267/140‑1 (MQ=255) ctGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTg > 2:482473/1‑140 (MQ=255) gACCGCTTCATTCGGCGCTTTGACTTCCCGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGcc < 1:1444973/140‑1 (MQ=255) aCCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCa > 1:285864/1‑140 (MQ=255) aCCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGACCAAACTGTGACTGCCa > 2:238926/1‑140 (MQ=255) aCCGCTTCATTAGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCa > 1:527780/1‑140 (MQ=255) ccGCTTCATTCGGCGCTTTGACTTCCAGACGATTAGCTCCCCACTCTACCGGAAAACTGACCTTTCCGGTTTCGTCCGCTTTCAGATCCAGTGTTTGTTCATTTTCGATCAGTTCTTTTTGATCATACTGTGACTGcctg < 2:824308/140‑3 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 2:41111/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 1:228291/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 2:1479115/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 1:1361457/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 2:1232895/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 1:120913/1‑140 (MQ=255) ttCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTAGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCtt > 2:335077/1‑140 (MQ=255) tCATTCGGCGCTTTTACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTc < 2:715076/140‑1 (MQ=255) tCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAACCTGACCATGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACGGCCAGCCTTc < 1:1498673/140‑1 (MQ=255) tCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTc < 1:1498705/140‑1 (MQ=255) tCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCAtct > 1:808527/1‑140 (MQ=255) cgcTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTg > 2:1251716/1‑140 (MQ=255) cgcTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTg > 2:1414759/1‑140 (MQ=255) tttGACTTCCAGACGATAAGCGCCCCACTCTACCTGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGTTCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGAcc < 1:881044/140‑1 (MQ=255) tttGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGAcc < 2:629832/140‑1 (MQ=255) tttGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCAGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGAcc < 1:1515585/140‑1 (MQ=255) tGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAg > 1:1255223/1‑140 (MQ=255) tCCAGACGATAATCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTATCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCGTCATCTTCTGACCAGTTCCa > 2:342601/1‑140 (MQ=255) tCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCa > 2:312074/1‑140 (MQ=255) ccccACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCgcggcg > 2:496213/1‑140 (MQ=255) ccccACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCgcggcg > 2:496098/1‑140 (MQ=255) ccccACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCgcggcg > 1:909452/1‑140 (MQ=255) ctACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGa < 1:223376/140‑1 (MQ=255) tACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTACCAGAAGTAATCGCGGCGTTCGCGaa > 1:1538571/1‑140 (MQ=255) ccGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTACATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATc > 2:695159/1‑140 (MQ=255) cGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGTTCTTTTTGATCAAACTGTGACTGCCAGCCTGCATCTTCTGACCAGTACCTGAAGTAATCGCGGCGTTCGCGAAACa > 2:1639727/1‑140 (MQ=255) cGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCa > 2:1304567/1‑140 (MQ=255) cGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTACAGTTGTAATCGCGGCGTTCGCGAATct > 2:859166/1‑139 (MQ=255) gAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAgg < 2:1187632/140‑1 (MQ=255) gAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGGTTGTTCAGGTTCGATCAGAGCTTTTAGATCCAACTGTGACTGCCAGCCTGCATCGTCTGACCAGTACCAGGAGGAATCCCGGCTATCGCGAATCAgg > 2:1303052/1‑140 (MQ=255) gAAAACTGACATAGCCGGTTTCGTCCGCTGTCTGATCCAGAGTTTGTTCAGTATCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTGATGTCCAGTTCCAGGAGTAATCGCGGCGTTCGCGTATCggg > 2:989216/1‑140 (MQ=255) aaaCTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGgcg < 1:1439531/140‑1 (MQ=255) aaCTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGgcgc > 1:1364560/1‑140 (MQ=255) cTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGAAATCGCGGCGATCGCGAATCAGGCGCAc > 1:457169/1‑140 (MQ=255) gACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCt > 2:397937/1‑140 (MQ=255) gACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCt > 2:397933/1‑140 (MQ=255) gACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCt > 2:1015009/1‑140 (MQ=255) gCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGc > 2:670277/1‑140 (MQ=255) gCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGc > 2:670588/1‑140 (MQ=255) gCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGc > 2:91369/1‑140 (MQ=255) gCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGc > 2:91383/1‑140 (MQ=255) ttCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGaca < 2:1146523/140‑1 (MQ=255) ttCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGaca < 2:1145738/140‑1 (MQ=255) ccGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCt > 2:1112108/1‑140 (MQ=255) agagTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGAAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTGTTTCACGCCTTg > 2:1628904/1‑140 (MQ=255) agagTTTGTTCATTTTCGATCAGATCTTGTTGATCAAACTGTCACTGCCAGCCTTCATCTTCTGACCAGTACCAGTAGTAAACGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACCGCTTATTACACGccgag > 2:1628761/1‑137 (MQ=255) gagTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTgc < 1:56272/140‑1 (MQ=255) tttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 2:145365/140‑1 (MQ=255) tttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:1347581/140‑1 (MQ=255) tttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:518065/140‑1 (MQ=255) tttGTTCATTTTAGATCAGTTCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:22177/140‑1 (MQ=255) tttGTTCATTTTAGATCAGATCTTTTTGCTCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:21289/140‑1 (MQ=255) tttGTTCATTTTAGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:21126/140‑1 (MQ=255) tttGTTCATTTTAGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:22145/140‑1 (MQ=255) tttGTTCATTTTAGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:21221/140‑1 (MQ=255) ttggTTCATATTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCa < 1:518052/137‑1 (MQ=255) ttGTTCATTTTCTATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 2:598390/140‑1 (MQ=255) ttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 1:145452/140‑1 (MQ=255) ttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 2:1433679/140‑1 (MQ=255) ttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 2:359953/140‑1 (MQ=255) ttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 1:69032/140‑1 (MQ=255) ttGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCAt < 1:69161/140‑1 (MQ=255) gTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCATCg > 2:1641107/1‑140 (MQ=255) ttttCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCATCGCtata > 2:1657271/1‑140 (MQ=255) ttttCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCATCGCtata > 1:1361072/1‑140 (MQ=255) ttttCGATCAGATCTTTATGATCAAACTGTTACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGTCTTTCGCGAAACAGGCGCACCTGCAAGCCCGACACGGCTTATTTCACGCCTTGCTCATCGCtata > 2:693367/1‑140 (MQ=255) | AGCTATAGCCAGCCCAGAAACGAACACTACTGACCGCTTCATTCGGCGCTTTGACTTCCAGACGATAAGCGCCCCACTCTACCGGAAAACTGACCTTGCCGGTTTCGTCCGCTTTCAGATCCAGAGTTTGTTCATTTTCGATCAGATCTTTTTGATCAAACTGTGACTGCCAGCCTTCATCTTCTGACCAGTTCCAGTAGTAATCGCGGCGTTCGCGAATCAGGCGCACCTGCAAGCCCGACACGGCTTTTTTCACGCCTTGCGCATCGCTATA > NC_000913/2650061‑2650334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |