BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4373296 =	90 (1.050)	99 (1.160)	6/256	4.2	52.6%	intergenic (+134/+69)	yjeI/yjeJ	DUF4156 family lipoprotein/uncharacterized protein
*	?	NC_000913	4374498 =	NA (NA)	99 (1.160)	6/256	4.2	52.6%	noncoding (1/99 nt)	RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 104 total aligned reads displayed.

GGTTAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCAGTT  >  NC_000913/4374366‑4374630

ggTTAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATg                                                                                                                               >  1:1443454/1‑140 (MQ=255)

        attGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTaa                                                                                                                       <  1:1241549/140‑1 (MQ=255)

                 aGCTATATAAAAATTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCTAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTAt                                                                                                              <  1:303782/140‑1 (MQ=255)

                 aGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTAt                                                                                                              <  2:1584116/140‑1 (MQ=255)

                    tatataAAAAGTAACAACATCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCg                                                                                                           <  2:488131/140‑1 (MQ=255)

                    tatataAAAAGTAACAACAGCAATGCATTTGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCg                                                                                                           <  2:1122094/140‑1 (MQ=255)

                    tatataAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCg                                                                                                           <  1:720868/140‑1 (MQ=255)

                       ttaAAAAGTAACAACAGCAATGCATATGTATAATAAATCATTATGCAACGGGCAAAGATTAAACTTCACAGTTTAATGACAGTATGCTGTACATGCGTTTGGTGCTCTTGACGGATGCAGCGGTAACGCCTAATCAGGcc                                                                                                        >  2:964903/2‑140 (MQ=255)

                             aGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTGGTTGCTCTTGCCGGATGCAGCGTAAACGCCTAATCCGGCCTACAGt                                                                                                  >  2:807342/1‑140 (MQ=255)

                              ctAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGAATAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGtt                                                                                                 <  2:223082/139‑1 (MQ=255)

                                        cAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACATGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAAt                                                                                       <  2:332759/140‑1 (MQ=255)

                                           tGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCa                                                                                    >  1:531710/1‑140 (MQ=255)

                                             cATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAtt                                                                                  >  1:1297213/1‑140 (MQ=255)

                                                    ataatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGCTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCTAATCCAttcaatttc                                                                           <  2:271899/140‑1 (MQ=255)

                                                     ttatTAATGGTTATGCACCGGGCAAAGATTAAACTACCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1338053/138‑1 (MQ=255)

                                                     tcaatAAAGGTATCGCACCGCGCAACGACAAAACTTCCCAGATTACTGACCGCTTGCGGAACAAGCGTTTGTTGCTCTTGCCGTACGTAGCGTAAACGCCTTAACAGGCCTACACGTCATTGCAACTCCCctcaacttca                                                                          <  2:868390/136‑1 (MQ=255)

                                                     tatttAAATGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACATTTTGCTGTACTTGAGTTTGTTGCTCTTGCCGGATTCATCGTAAACGCCTTATCCGGCCTACAGTTCATTGCTAATCCAttcaatttca                                                                          <  2:826467/137‑1 (MQ=255)

                                                     tatctacaGGTTATGCTACGGGCAAAGAATAACCTACCCAGTTTAATGACACGTAGCAGGACATGCGTTTGTTGCACTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGATCCTTGCAAATCCAttcaatttca                                                                          <  2:534421/133‑1 (MQ=25)

                                                     tacttAAAGGTTATGCAACGGGCAATGTTTAAACTTCCCAGTTTAATGAACGGTTGCTGTACTTGCGATTGTTCCTCTTGCCTGAAGGAGCGTATACGGCTTATCCGGCCTACAGTTCCTTGGAATTCCAttcaatttca                                                                          <  2:844205/137‑1 (MQ=255)

                                                     tacatAAAGGTTATTCAACGGGCAAAGATTAAACTTCCCTTGTTAATGGCATGTCGCTGTACTTGCGTTTGTTGCTCTTGCCGGCTGCAGCGTAAACGCATTATCCGGCCTACAGTTCAGTGCAAATCCAttcaatttca                                                                          <  2:757825/136‑1 (MQ=255)

                                                     taatTATAGGTTATGCATCGGGCATAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTTCTCTTTCCGTATGCAGCTTAATCTACTTATCCGGCCTACATTTCATTGCAAATCCAttctttttca                                                                          <  2:173436/140‑1 (MQ=255)

                                                     taatTATAGGTTATGCAACGGGCACCGACTAAACTACCCAGTTTAATGTCAGGTTGCTGTACTAGCGTTTGTTGCTCTTGCCGGCTGCAGCGTCACCGCCTTATCCGGCCTACAGTTCATTGCAACTCCAttcaatttca                                                                          <  2:686102/140‑1 (MQ=255)

                                                     taatTAAAGTTTATGCAAAGGTCAAAGATTAAACTTCACAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCATCTTAAACGGCTTATCCGGCCTTCATTTCATTGCAAATCCAttcaatttca                                                                          <  2:499353/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTTAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCATATCCAttcaatttca                                                                          <  2:1338057/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTACACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACCGGTCATTGCAAATCCAttcaatttca                                                                          <  2:737816/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAACCTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGAAGCGTAAACGCCTTATCCGGCCTACAGGTCATTGCAAATCCAttcaatttca                                                                          <  2:822346/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGTTGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1465603/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACCGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1203919/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1363654/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1243246/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:316992/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:289523/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:287719/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:382259/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:399442/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1558422/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1577677/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:174952/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:344255/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:610950/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:620235/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1149582/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1122569/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1037452/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:630034/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:643132/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:668189/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:932928/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:823930/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:679666/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATGGCAAATCCAttcaatttca                                                                          <  2:668190/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCAACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1511775/140‑1 (MQ=255)

                                                     taatTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATACGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1165041/140‑1 (MQ=255)

                                                     taaataaaGGTTATGCAACTGGCAAAGATTAAACGTCCCAGTTTAATGACTTGATCCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACACTTCATTGCAAATCCAttcaatttca                                                                          <  2:757910/140‑1 (MQ=38)

                                                     acttcaaaGGTTATGCAACGGGCAAAGAATAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:1595600/135‑1 (MQ=255)

                                                     aactcaaaGGTTATGCAACGGGCAAAGAATAAACGTCCCAGTGTAATGACAGGTTGCGGTACATGCGTTAGTTGCTCGCGCCGGATGCAGCGTAAACGCCTGATCCGGCCTACAGTTCATTGCAAATCCAttcaatttcc                                                                          <  2:822382/135‑2 (MQ=255)

                                                     aaatTAAAGTTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTAGCTGTACTTGCGTGTGTTTCTCTTGCCGGATGCAGCGTAAACGCCTAATCCGGCCTACAGTTCATTGCATATCCAttcaatttca                                                                          <  2:1468734/139‑1 (MQ=255)

                                                       atTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttcaat                                                                        >  1:115135/1‑140 (MQ=255)

                                                          aaaGTTTATGCAACGGGCAAAGATTAAACTTCCCTGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:137024/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:55243/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  2:449138/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:175942/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:57082/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:1502926/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:1312199/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACGTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACCGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  1:118629/140‑1 (MQ=255)

                                                          aaaGGTTATGCAACGGGCAAAGATTAAACGTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCa                                                                     <  2:980423/140‑1 (MQ=255)

                                                            aGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACg                                                                   <  1:1061681/140‑1 (MQ=255)

                                                            aGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACg                                                                   <  1:757801/140‑1 (MQ=255)

                                                               ttATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATg                                                                <  1:307003/140‑1 (MQ=255)

                                                               gtATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTACCCGCCTTATCCGGCCTACAGTTCATTGCAAATCCATACAATTTCAATGCACGATg                                                                <  1:306973/139‑1 (MQ=255)

                                                                tATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGt                                                               >  2:124720/1‑140 (MQ=255)

                                                                 aTGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTa                                                              <  1:1408172/140‑1 (MQ=255)

                                                                 aTGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATATCAATGCACGATGTa                                                              >  1:1594618/1‑140 (MQ=255)

                                                                  tGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCATAGCACGATGTAg                                                             >  1:816744/1‑140 (MQ=255)

                                                                  tGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAg                                                             >  1:1591683/1‑140 (MQ=255)

                                                                  tGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAg                                                             >  1:1304378/1‑140 (MQ=255)

                                                                  tGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAg                                                             >  2:607707/1‑140 (MQ=255)

                                                                   gCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAgg                                                            <  2:115135/140‑1 (MQ=255)

                                                                        gggCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGACTGa                                                       >  2:836091/1‑140 (MQ=255)

                                                                                         cccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATGCATTCAATTTCAATGCACGATGTAGGCCTGTTAAGCGTAGCGAATCAg                                      >  2:624089/1‑140 (MQ=255)

                                                                                         cccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGCTGTAGGCCTGATAAGCGTAGCGAATCAg                                      >  2:623879/1‑140 (MQ=255)

                                                                                         cccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAg                                      >  1:1523696/1‑140 (MQ=255)

                                                                                          ccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                     <  2:1331892/140‑1 (MQ=255)

                                                                                          ccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                     >  1:230273/1‑140 (MQ=255)

                                                                                          ccAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAgg                                     <  2:1332008/140‑1 (MQ=255)

                                                                                                  aTGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTa                             <  1:111271/140‑1 (MQ=255)

                                                                                                             cTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGACTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACtt                  <  2:1591683/140‑1 (MQ=255)

                                                                                                              tGTACTTGCGTTTGTTGCTCTTGCCGGATGGTGCGTAAACGCCTTATCCGGCCTACAGTTCCTTGCAATTCCATTCAATTTCAATGCACGATGTAGGCGTGATTAGCGTTGCGAATCAGGCAATTTTAATGTTTAACTTc                 <  2:742458/140‑1 (MQ=38)

                                                                                                              tGTAATTGCGTTTGTTGGTCTTGCCGGATGAAGCTTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAAATTc                 <  1:1398861/140‑1 (MQ=37)

                                                                                                                  cTTGCGTTTGTTGCTCTTGCCGGATTCAGCGTAAACGCCTTATCCGGCCTTCAGTTCATTGCAAATCCTTTCAATTTCATTGCAAGTGGTTGGCGTGATAAGAGTTGCGAATGAGGCAATTTTTAGGTTTATCttgactg             >  2:1180694/1‑135 (MQ=255)

                                                                                                                  cTTGCGTTTGTTGCTCTTGACGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTg             >  2:683951/1‑140 (MQ=255)

                                                                                                                     gCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGttt          >  1:1583974/1‑140 (MQ=255)

                                                                                                                     gCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTAATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGAAGTATGCCAGATAAGCGTATCGAATCAGTCAATTTTAATGTTTAACTTcccagata          >  1:1586060/1‑135 (MQ=255)

                                                                                                                          cgttgGTCATGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          >  1:205093/2‑71 (MQ=255)

                                                                                                                          cgttgGTCATGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          >  1:205114/2‑71 (MQ=255)

                                                                                                                          cgttgGTCATGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:205114/70‑1 (MQ=255)

                                                                                                                          cgttgGTCATGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          <  2:205093/70‑1 (MQ=255)

                                                                                                                             acttattGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCAGtt  >  1:751967/6‑140 (MQ=255)

                                                                                                                                  atGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCAttcaatttca                                                                          >  1:986876/2‑63 (MQ=255)

GGTTAATTATTGGTGTTAGCTATATAAAAAGTAACAACAGCAATGCATATGAATAATTAAAGGTTATGCAACGGGCAAAGATTAAACTTCCCAGTTTAATGACAGGTTGCTGTACTTGCGTTTGTTGCTCTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACAGTTCATTGCAAATCCATTCAATTTCAATGCACGATGTAGGCCTGATAAGCGTAGCGAATCAGGCAATTTTAATGTTTAACTTCCCTGTTTAATCAGTT  >  NC_000913/4374366‑4374630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.