Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913915,1990AT20.0% 213.9 / 10.5 112intergenic (‑342/+153)ybjE/aqpZputative transporter/aquaporin Z
Reads supporting (aligned to +/- strand):  ref base A (75/5);  new base T (0/20);  total (75/37)
Fisher's exact test for biased strand distribution p-value = 9.91e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 117 total aligned reads displayed.

AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAG  >  NC_000913/915060‑915337
                                                                                                                                           |                                                                                                                                           
aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCa                                                                                                                                             <  2:415416/140‑1 (MQ=32)
aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCa                                                                                                                                             <  1:805034/140‑1 (MQ=32)
aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCa                                                                                                                                             <  1:1358813/140‑1 (MQ=32)
aaGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCa                                                                                                                                             <  1:140077/140‑1 (MQ=32)
     cGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTATTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAcgggg                                                                                                                                        >  2:717582/1‑140 (MQ=17)
       gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTTCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcg                                                                                                                                      >  2:128695/1‑140 (MQ=17)
       gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGggcg                                                                                                                                      >  2:123342/1‑140 (MQ=32)
             cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGgcggcggcg                                                                                                                                >  1:1558284/1‑140 (MQ=32)
             cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGgcggcggcg                                                                                                                                <  1:1516289/140‑1 (MQ=32)
             cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGgcggcggcg                                                                                                                                >  1:1317963/1‑140 (MQ=32)
             cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGgcggcggcg                                                                                                                                <  2:281241/140‑1 (MQ=32)
             cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGgcggcggcg                                                                                                                                >  1:960245/1‑140 (MQ=32)
                   tGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgc                                                                                                                          <  2:1357403/140‑1 (MQ=32)
                   tGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgc                                                                                                                          <  2:1357552/140‑1 (MQ=32)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCTGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:1540389/1‑140 (MQ=17)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCATGGGGCGGCGGCGATTGggcggc                                                                                                                      >  1:1255044/1‑138 (MQ=12)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:1257466/1‑140 (MQ=32)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:783822/1‑140 (MQ=32)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:649870/1‑140 (MQ=32)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:648092/1‑140 (MQ=32)
                       tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGAGAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                      >  1:1257467/1‑140 (MQ=17)
                         tgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccc                                                                                                                    >  1:1356672/1‑140 (MQ=32)
                           ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGccccca                                                                                                                  >  1:103635/1‑139 (MQ=17)
                            gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg                                                                                                                 >  2:476232/1‑140 (MQ=32)
                            gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg                                                                                                                 >  2:1032277/1‑140 (MQ=32)
                            gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg                                                                                                                 >  2:1032686/1‑140 (MQ=32)
                                aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cgcg                                                                                                            >  1:1583272/1‑140 (MQ=32)
                                aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cgcg                                                                                                            >  1:743530/1‑140 (MQ=32)
                                aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAg‑cgcg                                                                                                            >  1:920578/1‑140 (MQ=17)
                                aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAg‑cgcg                                                                                                            >  1:920575/1‑140 (MQ=17)
                                      cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCACGGGGGTGCAGGGGGCGGCGGCGATTGGCCGACCCCTT‑CGCGCTccgt                                                                                                      >  1:1600774/1‑138 (MQ=255)
                                           tACTGGGTTTTTACCTCGCGCCCGACCGGGTAGCGGTAAGTGATATGTGGGGGGCACCGCGCAGGGGCTTTTTTTTTCGCCTCAGCCGGGGGGGGCTGGGGGCGGGGGCTATTGGCCGCCCCCTG‑CGCGCTCCTTGCGcc                                                                                                 <  2:1388165/140‑1 (MQ=2)
                                           tACTGGGTTGTTACCGCGCGCCCGACCGGGTAGCCTTTTGGTTTACGTCGTGGGCACCGCGCAGCGGCTTTTTTTTTCGCCTGTGCCGGGGGGTGCTGGGGGCGGGGGCTTTGGGCCGCCCCCTG‑CGCGCTCCTTGCGcc                                                                                                 <  2:1388583/140‑1 (MQ=2)
                                                gttttttACCTCGCGCCCGACCGGGTTGCTTTACGGGATATGTGGGGGCCACCGCGCCGCGGCTTTTTTGTTGGCCTGAGCCCGGGGGGGCTGGGGGGGGCGGCTTTGGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTgg                                                                                            <  2:1383764/135‑1 (MQ=2)
                                                ggtggTTCCCTCGGGCCCGCCCGGTTCGCCGTAGGGTTTAAGTGGTGGGCCCCGCGCCGGGGCTTTTTTGTACGCATGCGCCGGGGGGTGGTGGGGGGGGCGGCTTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTgg                                                                                            <  2:1384064/136‑1 (MQ=2)
                                                ggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTgg                                                                                            >  2:437469/1‑140 (MQ=18)
                                                  ttGTAACCCCCCGCCCCACCCTGTCGCCGTCTGGTATCCGTCGGGGCCACCGCGCTCGGGCTATTTTGTTCGCCAGCCCCGGGGGGTGGTGGGGGGGGCGGCTTTGGCCCGCCCACTC‑CGCGCTCCTTGCGCCAGTGGCa                                                                                          <  2:852760/139‑1 (MQ=2)
                                                  aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCa                                                                                          >  1:711299/1‑140 (MQ=34)
                                                  aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCa                                                                                          >  1:444836/1‑140 (MQ=34)
                                                  aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCa                                                                                          >  1:939368/1‑140 (MQ=34)
                                                     ttACCTCTCGCCCGACCCGGTCGCCGTAAGGGATACGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGCAata                                                                                       >  2:656950/1‑140 (MQ=255)
                                                     ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCATAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCATGCGCCAGTGGCAata                                                                                       >  1:590625/1‑140 (MQ=255)
                                                     ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTGCCGCCCCCAG‑CGCGCTCCATGCGCCAGTGGCAata                                                                                       >  1:920277/1‑140 (MQ=255)
                                                     ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAata                                                                                       >  1:623525/1‑140 (MQ=37)
                                                     ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAata                                                                                       >  1:506297/1‑140 (MQ=37)
                                                       aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATg                                                                                     >  1:1337538/1‑140 (MQ=39)
                                                        ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCCGTGGCAATATGt                                                                                    >  1:1287885/1‑140 (MQ=255)
                                                        ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATGTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGGCCCCCCCCAG‑CGCGCTCCTTGCGCCAGGGGCAATATGt                                                                                    >  1:1287554/1‑140 (MQ=14)
                                                           cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGATCCCGGGGGTGCATGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGc                                                                                 >  1:770559/1‑140 (MQ=255)
                                                             cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                               >  1:804341/1‑140 (MQ=255)
                                                             cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                               >  1:765646/1‑140 (MQ=255)
                                                             cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt                                                                               >  2:114039/1‑140 (MQ=255)
                                                                       gttcgCCGTATGGTTTAAGTGGAGGGCACCGGGCTGCGGCGATTTTGTTCGCCAGTGCGGGGGGTTGCTGGGGGCGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaa                                                                     <  2:1407340/136‑1 (MQ=17)
                                                                        gTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaaa                                                                    >  2:1288229/1‑140 (MQ=255)
                                                                            ccGTATGGGATATGGCGTGGGCACGGCGCCGCGGGTTTTTTGTTCGCCAGCGCCGGGGGGGGCTGGGGGGGGGGGGTTGTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAg                                                                <  2:466172/140‑1 (MQ=12)
                                                                              gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg                                                              >  2:441829/1‑140 (MQ=255)
                                                                              gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg                                                              >  2:854037/1‑140 (MQ=255)
                                                                               tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc                                                             >  1:1477558/1‑140 (MQ=255)
                                                                               tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc                                                             >  1:557606/1‑140 (MQ=255)
                                                                                      tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAACGGAGCGCAACAAga                                                      >  2:715375/1‑140 (MQ=255)
                                                                                      tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAAGATTTTGCTTAGCTCATGAAAGGAGCGCAACAAga                                                      >  1:452142/1‑140 (MQ=255)
                                                                                      tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAga                                                      >  2:717393/1‑140 (MQ=255)
                                                                                       aattCGAGGGCACCGCGCAGCGGCGAATTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat                                                     >  2:996392/4‑140 (MQ=255)
                                                                                       aaGTCGAGGGCACCGCGCAGCGGCGTTTTTGTTCGCCAGAGCCCGGGGGTGGAGGGGGCGGCGGCGAGTGGCCGCCCCCGG‑CCCGCTCCGTCCGCCAGTGGCAATATGGTGCTTAGCTGCGTAATGGAGCGCAACCAgag                                                     >  2:516110/1‑139 (MQ=14)
                                                                                       aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat                                                     >  2:995290/1‑140 (MQ=255)
                                                                                              gggCCCGGCGCTGGGGCTATTTTGTTCGCCAGCGCCGGGGGGTGCTGGGGGCGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  2:1317963/140‑1 (MQ=18)
                                                                                              gggCCCCGCGGCGGGGCTATTTGGTTCGCCTGCGCCGGGGGGTGCCGGGGGGGGGGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  2:430999/140‑1 (MQ=18)
                                                                                              gggCAGCGCGCCGGGGGGTTTTTGTTCGCCTGAGCCGGGGGGTGCCGGGGGCGGGGGCGTTTGCCCGCCCCGTG‑CGCGCTCCTTGCGCCAGTGGCAATTTGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  2:1335778/140‑1 (MQ=18)
                                                                                              gggCACCGCGCAGGGGCGATTTTGTTCGCCAGAGCCGGGGGGTGCCGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  2:1558284/140‑1 (MQ=255)
                                                                                              gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTTGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              >  1:499380/1‑140 (MQ=255)
                                                                                              gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGTAAGGGGCGCAACAATATGATGAAt                                              >  1:1569342/1‑140 (MQ=255)
                                                                                              gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGAGTGGCCGCCCCCTG‑CGCCCTCCTTGAGCCAGTGGCAATATGTTGCTTTTATCATGAAAGGAGCGCAACAAGATGATGTAt                                              >  2:778333/1‑140 (MQ=17)
                                                                                              gggCACCGCGATGCGGGTTTTTTGTTCGCCTGTGCCGGGGGGTGCTGGGGGGGGGGGATATGGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  1:760974/140‑1 (MQ=18)
                                                                                              ggccACCGCGCTGGGGCTTTTTTGTTCGCATGAGCCGGGGGGTGCTGGGGGGGGGGGCTTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                              <  2:1231531/137‑1 (MQ=18)
                                                                                                 ccccGCGCTGCGGCGTTTTGTTTCGCCAGCGCCGGGGGTTGCTGGGGGCGGGGGCGATGGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa                                           <  2:909340/138‑1 (MQ=18)
                                                                                                   ccGCGAAGCGGCTTTTTTTTCCGCCTGCGCGGGGGGGTGCGGGGGGGGGGGCTTTTTGGCCCCCCCCAC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACa                                         <  1:1402926/140‑1 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGTGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat                                        >  2:619279/1‑140 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGCAAAAAGATGATGAATGAACat                                        >  1:1109864/1‑140 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATTATGAATCAACat                                        >  1:416975/1‑140 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat                                        >  1:670935/1‑140 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat                                        >  2:1430489/1‑140 (MQ=255)
                                                                                                    cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat                                        >  1:416865/1‑140 (MQ=255)
                                                                                                                            cgcccgggggggTCCGGGGGGGGGCGGCGTGGGCCCCCCCCCCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc                <  1:1106401/133‑1 (MQ=37)
                                                                                                                            atcgCCGGGGGGTGCTGGGGGGGGGGGCG‑TTGGCCCCCCCCCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc                <  2:265227/137‑1 (MQ=37)
                                                                                                                             gtgcgggggggTGCTGGGGGCGGCGCCGATTGGCCGCCCCATG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt               <  2:769946/134‑1 (MQ=37)
                                                                                                                             gcgCCGGGGGTTGCTGGGGGCGGGGGCTTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt               <  2:446126/138‑1 (MQ=37)
                                                                                                                             gcgCCCGGGGGTGCTGGGGGCGGCGGCGTTGGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAACGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt               <  2:446268/138‑1 (MQ=37)
                                                                                                                             gagCCGGGGGGTGCTGGGGGCGGCGGCTTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt               <  2:1321152/140‑1 (MQ=255)
                                                                                                                             gagCCGGGGGGGGCTGGGGGCGGCGGCGTTGGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt               <  2:119193/140‑1 (MQ=37)
                                                                                                                             cagCCCGGGGGTGCCGGGGCCGGCTGCTCTCGCCCGCCCCCTC‑CGCGCTCCTTGCGCCAGATGCAATATGTTGCTTACCACATGAAAGGAGCGCAACAAGATGATGAATCAACCAATAACAACATCTTAAAAAAAGGcgt               <  2:1371918/139‑3 (MQ=255)
                                                                                                                              agCCCGGGGGTGCAGGGGGCGGCGGCGATTTGCCGCCCCCTG‑CGCGCGCCTTGCGCCAGTGGCAAAATTTTGCTTAGCACAAGAAAGTATCGCAACAAGATGATGAAACAAAATATAACAACATCTTAAAAAAATGCCTg              >  1:1614452/1‑140 (MQ=21)
                                                                                                                                 ggggggtTGCGGGGGGGGGCGGCTTTGGCCCCCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa           <  1:965327/138‑1 (MQ=37)
                                                                                                                                 cgggggggGCTGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa           <  2:549536/138‑1 (MQ=255)
                                                                                                                                 cggggggTGGTGGGGGGGGCGGCGATTGCCCCCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa           <  2:103635/138‑1 (MQ=37)
                                                                                                                                  cGGGGGTGCGGGGGGCGGGGGCGTGGGCCCGCCCCCTG‑CGCGCTCCTTGCGCCAGAGGCAATATGTTGCTTAGCTCATGAACGGAGCGCAACAAGATGATGAATCAACCTATAACACCTTCTTAAAAAAAGGCCTGACAt          <  2:599990/140‑1 (MQ=37)
                                                                                                                                     gggTGCGGGGGGGGGGGGCGTTTGGCCCCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTAc       <  2:416865/140‑1 (MQ=38)
                                                                                                                                     gggTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAATAAAAGGCCTGACATTAc       >  2:548603/1‑140 (MQ=255)
                                                                                                                                          cAGTGGTCGGCGGGGGGTGGCCGCCCCCTG‑AGCGCTCCTTGCGCCAGTGGCACTATGTTGCTTATCTCATGATATGAGCGCAACAAGAAGAGGGATCAACAGGTAACAACATCTGAATAAAGGGCCTGTCAttgagcggg  >  2:356466/1‑133 (MQ=255)
                                                                                                                                          cAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGTATCAACAAATAACAACATCTTAAAAAAATGCCTGACATTACGCCAg  >  1:1509793/1‑140 (MQ=255)
                                                                                                                                          cAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATAAACATATAACAACAACTTAAAAAAAGGCCAGACAATAACCCAg  >  1:174447/1‑140 (MQ=37)
                                                                                                                                           |                                                                                                                                           
AAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAG  >  NC_000913/915060‑915337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑