Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,908,5140AT28.7% 154.0 / 15.8 95intergenic (‑148/+35)pstB/pstAphosphate ABC transporter ATPase/phosphate ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base A (48/19);  new base T (0/27);  total (48/47)
Fisher's exact test for biased strand distribution p-value = 1.52e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 106 total aligned reads displayed.

TTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908375‑3908653
                                                                                                                                           |                                                                                                                                           
tttCCTCCTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  2:409195/140‑1 (MQ=255)
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             >  2:554478/1‑140 (MQ=255)
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  1:41760/140‑1 (MQ=255)
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  2:60950/140‑1 (MQ=255)
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  2:458416/140‑1 (MQ=255)
tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                             <  2:457450/140‑1 (MQ=255)
aaaccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCACCTCTGGGgaga                                                                                                                                             <  2:1169534/137‑1 (MQ=255)
  tCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg                                                                                                                                           <  1:316912/140‑1 (MQ=255)
     tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt                                                                                                                                        <  2:1073287/140‑1 (MQ=255)
        tCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCATATGGGGAGAGGGTTAgg                                                                                                                                     >  2:891516/1‑140 (MQ=255)
             ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  1:882120/1‑140 (MQ=255)
             ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  1:881515/1‑140 (MQ=255)
             ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  1:881512/1‑140 (MQ=255)
                      cTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAcc                                                                                                                       >  2:225336/1‑140 (MQ=255)
                        tCGCTAATCAGGCTTACCGTTGGCCGCATCTGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGAACAGAGTCAAAAAGGCGCTCGTTCGTTCCCCTCGCCCCTCTGGGTAGTGGTTTAGGGTGAGGGGAAAACCgt                                                                                                                     <  2:802435/140‑1 (MQ=255)
                         cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGGTAACCGTGTACAGAGTCAAAAAGGCGCTCGGGCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGACAACCgtg                                                                                                                    >  2:667245/1‑140 (MQ=255)
                          gCTAATCCGGCTTACCGTAGGCCGGATCTGGCGTTCACGCCGCATCCGGAAAAGTGTTACCCGTTTACAGAGACAAAAAGGCGCTCGTTCGGCCCCCTCGCCCCTCTGGGGTGAGGGTTAGGGTGAGGGGAAAACCgtgt                                                                                                                   <  2:180515/140‑1 (MQ=37)
                            tAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCa                                                                                                                 >  2:512479/1‑140 (MQ=255)
                                   gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:1069375/1‑140 (MQ=255)
                                   gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:299180/1‑140 (MQ=255)
                                   gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:764684/1‑140 (MQ=255)
                                    cTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATc                                                                                                         >  1:607316/1‑140 (MQ=255)
                                      tACGGTCGGCCGCACCAGGCGTTCACGCCGCTTCCGGAAATGTTTTAACGGTGAACAGAGTCAAAACGGGGGTCGGTCGGTCCCCTCGCCCCTCTGGGTTGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCaa                                                                                                       <  1:1310450/140‑1 (MQ=255)
                                      tACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCaa                                                                                                       >  2:252571/1‑140 (MQ=255)
                                       aCCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGTTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  2:1513262/140‑1 (MQ=255)
                                            aGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCACTATCAACCgtgt                                                                                                 >  1:132083/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  1:330819/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  1:328346/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:34783/1‑140 (MQ=255)
                                             ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1117448/1‑140 (MQ=255)
                                              gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGttt                                                                                               >  2:1325323/1‑140 (MQ=255)
                                              gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTtttt                                                                                               >  2:1349910/1‑140 (MQ=255)
                                                  gATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc                                                                                           >  2:528580/1‑140 (MQ=255)
                                                        gCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCa                                                                                     >  2:1087385/1‑140 (MQ=255)
                                                            tCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaaaa                                                                                 >  2:1195690/1‑140 (MQ=255)
                                                             cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac                                                                                >  1:819817/1‑140 (MQ=255)
                                                             cACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGGTTATTCTTCGCaaaatc                                                                                >  1:819895/1‑138 (MQ=255)
                                                                   gcATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcg                                                                          >  2:693388/1‑140 (MQ=255)
                                                                        cGGAAAAGTTTTAACCGTGTACAGAGAAAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGATAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa                                                                     <  2:733647/140‑1 (MQ=38)
                                                                        aggCAAAGTGTTAACCGTTTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCCCGCCCCTCTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa                                                                     <  2:1484138/139‑1 (MQ=255)
                                                                          gaaaaGTTTTAACGGTGTACCGAGTCAAAATGGCGCTGGGTCGGTCCCCTCGCCCATGTGGGGAGTGGTTTTGGGTGGGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGa                                                                   <  1:1479813/138‑1 (MQ=255)
                                                                             atgtgtTACCGGTGTACAGATTCAAAACGGCGCTCGGTCGGTCCCCACGCCCCTCTGGGGTGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATg                                                                <  1:512332/138‑1 (MQ=38)
                                                                                  ttACCCGTGAACAGATTCAAAACGGCGCTCGGACGTACCCCTCGCCCCCATGGGGAGAGGTTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcag                                                           <  2:167833/140‑1 (MQ=255)
                                                                                  taaaCAGTGTAAAGCGTCAAAAAGGCGCTCGGTCGGTCCCCTCCCCCCTCTGGGGAGAGTGTTAGGTTTAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcag                                                           <  2:167867/138‑1 (MQ=255)
                                                                                    aaCCGTTTCCTGTGTCAAAACGGCGCTGGGTGGGTCCCCTCGCCCCTGGGGGGTGTGGTTTTGGGTGCGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  1:882641/140‑1 (MQ=255)
                                                                                    aaCCGTGTACAGAGTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  2:777921/140‑1 (MQ=255)
                                                                                    aaCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGACCCCTCGCCCCACAGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACTCGCGCCAGAATGATcagca                                                         >  2:144478/1‑140 (MQ=39)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:1070943/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:140585/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:1262200/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:1485655/1‑140 (MQ=255)
                                                                                     aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcct                                                        >  1:1484138/1‑138 (MQ=255)
                                                                                       cGTGTACAGAGTCAAAAAGGCGCTCGGTGGGTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagca                                                      <  2:189339/140‑1 (MQ=255)
                                                                                         tgtACTGAGTAAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGTTGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGt                                                    <  1:797989/140‑1 (MQ=39)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  2:603904/1‑140 (MQ=255)
                                                                                          gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:1600641/1‑140 (MQ=255)
                                                                                           tACAGAGTCAAAAAGGCGCTCGTTCGTTCCCCTCGCCCCTCTGGGTTTAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTAc                                                  <  2:960588/140‑1 (MQ=39)
                                                                                              cgcgacAAAAAGGCGCTCGGTCGGGCCCCTCGCCCCGCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACACCGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:27396/135‑1 (MQ=39)
                                                                                              attttaaaaacGGCGCTGGGTGGGCCCCCCCGCCCCTGGGGGTAGTGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:225336/134‑1 (MQ=255)
                                                                                              attttCAAAAAGGCGCCATGTGGGCCCCCACGCCCAACTGGGTTGTTGGTTTGGTGGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:437739/136‑1 (MQ=255)
                                                                                              atagaaaaaacGGCGCTGGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGTTTCGGGTGTGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1105114/134‑1 (MQ=255)
                                                                                              agtgtaaaaatGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:321494/134‑1 (MQ=255)
                                                                                              agattaaaaatGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGTTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:1183662/134‑1 (MQ=39)
                                                                                              agagaaaaaacGGCGCTCGGTCGGTCCCCACGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:766602/134‑1 (MQ=39)
                                                                                              agagTCAAAACGGCGCTGGGTCGGCCCCCCCGCCCCTCGGGGGAGAGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1028550/140‑1 (MQ=255)
                                                                                              agagTCAAAACGGCGCTCGGTGGGTCCCCTCGCCCCTCTGGGGTGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:684255/140‑1 (MQ=255)
                                                                                              agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:1513108/140‑1 (MQ=255)
                                                                                              agagTAAAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGTGGTTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:203587/140‑1 (MQ=39)
                                                                                                  tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAgg                                           >  1:941263/1‑140 (MQ=255)
                                                                                                  tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAgg                                           >  1:772563/1‑140 (MQ=255)
                                                                                                  tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAgg                                           >  1:570547/1‑140 (MQ=255)
                                                                                                  tCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAgg                                           >  1:570458/1‑140 (MQ=255)
                                                                                                     taatggCGCTCGGTGGGGCCCCTCGCCCCTCGGGGGTGAGGGTGTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGAGCCAGAATGTTCAGCAGAAGTACGCACAGGGTa                                        <  1:740277/136‑1 (MQ=255)
                                                                                                     acaaGGCGCTCGGTGGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  2:1423102/138‑1 (MQ=255)
                                                                                                     aactggCGCTCGGTCGGACCCCTCCCCCCTCTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1182140/136‑1 (MQ=255)
                                                                                                     aaccggCGCGGGGTCGGCCCCCCCCCCCCTGTGGGTTGCGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:154145/136‑1 (MQ=255)
                                                                                                     aaatGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGTAGTGGGTTTGGGTCTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  2:1040331/140‑1 (MQ=255)
                                                                                                     aaacGGCGCTCGGTGGGTCCCCTCGCCCCTCTGGGTAGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1257935/140‑1 (MQ=255)
                                                                                                     aaaaGGCGCTCGGTCTGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1572677/140‑1 (MQ=255)
                                                                                                       aaGGCGCTCGGTGGGACCCCTCGCCCCTCTGGGTTGTGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt                                      <  1:512479/140‑1 (MQ=255)
                                                                                                       aaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt                                      <  2:1581253/140‑1 (MQ=255)
                                                                                                          gcgcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGAt                                   >  1:3322/1‑140 (MQ=255)
                                                                                                            gcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGATAGGGTGAGGGGAAAACCGTGTCAGCAAAATCAACCGTGTATATACTTCGCACAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAtcatca                                 >  2:23582/1‑140 (MQ=38)
                                                                                                            gcTCGGTCGGTCCCCTCGCCACTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGAGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGATCAGCAGCAGTACGCACAGGGTAATGATCa                                 >  2:1216803/1‑140 (MQ=255)
                                                                                                             cTCGGTCGGTCCCCTCGCCCCTCTGGGGTGTGTTTTTGGGTTCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCaa                                <  1:1410622/140‑1 (MQ=255)
                                                                                                                 gtcggccCCCTCGCCCCTCTGGGGAGTGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcc                            <  1:787289/140‑1 (MQ=255)
                                                                                                                  tcggtcCCCTCGCCCCTGTGGTGAGAGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc                           <  1:68320/140‑1 (MQ=255)
                                                                                                                  tcggtcCCCTCGCCCCTCTGGGTAGTGGTTTCGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc                           <  1:738898/140‑1 (MQ=255)
                                                                                                                  cggtcccccACGCCCCTCTGGGTAGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAccc                           <  1:340790/135‑1 (MQ=255)
                                                                                                                     gtcCCCTCGCCCCTGTGGGGAGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCgg                        <  1:4848/140‑1 (MQ=255)
                                                                                                                          cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg                   >  2:834261/1‑140 (MQ=255)
                                                                                                                          cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg                   >  2:591369/1‑140 (MQ=255)
                                                                                                                            cGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGc                 >  1:1044709/1‑140 (MQ=255)
                                                                                                                                ccTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt             >  2:322681/1‑140 (MQ=255)
                                                                                                                                   gtGGGGTGTGGTTTTGGGTGTGGGTAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgc          <  1:1131258/139‑1 (MQ=255)
                                                                                                                                   ctGGGGAGTGGGTTAGGGGGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgc          <  1:1131326/140‑1 (MQ=255)
                                                                                                                                         agagGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  1:182675/87‑1 (MQ=255)
                                                                                                                                         agagGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         >  2:182675/1‑87 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAATCAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  2:424358/1‑140 (MQ=255)
                                                                                                                                           agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  1:1293756/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908375‑3908653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑