| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3589239 = | 83 (0.810) | 4 (0.040) | 3/262 | NT | 5.3% | coding (789/846 nt) | ugpE | sn‑glycerol‑3‑phosphate ABC transporter permease |
| ? | NC_000913 | 3589345 = | 64 (0.670) | coding (683/846 nt) | ugpE | sn‑glycerol‑3‑phosphate ABC transporter permease | |||||
GAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3589392‑3589239‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggtgCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > NC_000913/3589345‑3589493 GAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGT < 1:639217/150‑1GAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGT < 1:639206/150‑1 TCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGT > 2:1559880/1‑150 TCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGT > 2:1087941/1‑150 TCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGT > 2:1087939/1‑150 CAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATAAAAGGGATGATAGCTACAGGCGAAGGCACCACGGAATGGAAATCAGTGATGGTGGCGATGTTGTTAAAGCTTATACCAACGGTGGgg > 1:1672867/1‑148 GGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATAC > 1:1177475/1‑150 GGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATAC > 1:1177473/1‑150 GCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACT > 1:490567/1‑150 TCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGA < 2:490567/150‑1 CGGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGC < 2:430872/150‑1 GGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCC < 1:1049007/150‑1 GGTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCC < 2:1361782/150‑1 GTGGTGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATCGCCAATGCGCtt < 2:1212401/150‑3 TGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGA < 2:1177473/150‑1 TGCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGA < 2:1177475/150‑1 TGCCGAGATCCACATCGGTAATAATCAAAAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGA < 2:770633/150‑1 GCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > 2:386684/1‑150 GCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT < 1:948814/150‑1 GCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > 1:1446907/1‑150 GCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > 2:502184/1‑150 GCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > 1:1083879/1‑150 GAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3589392‑3589239‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtggtgCCGAGATCCACATCGGTAATAATCAACAACGGCCACAAATACTGATTCCAGCCGTAGATAAAGGTGATCACAAACAGCGCCGCCAGATTAGTTTTGGAGAGCGGAAAAACGATGTCGCAAAAGAAGCGCATTGGCGATGCGCCGTCGAT > NC_000913/3589345‑3589493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |