| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,807,555 | G→T | 5.4% | Q182K (CAG→AAG) | waaQ ← | lipopolysaccharide core biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,807,555 | 0 | G | T | 5.4% | 410.7 / 10.0 | 112 | Q182K (CAG→AAG) | waaQ | lipopolysaccharide core biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base G (46/60); new base T (2/4); total (48/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAA > NC_000913/3807409‑3807703 | ttttGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGAcg > 2:1352253/1‑150 (MQ=255) tCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTc > 2:1544558/1‑150 (MQ=255) cAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTCGAAAATTTATCGTTATCCCAACACTGAAATATCTGACGCGCTGTCGGt > 2:384722/1‑150 (MQ=255) cTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGa < 1:799526/150‑1 (MQ=255) tCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGAt > 2:866477/1‑150 (MQ=255) tCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGAt > 2:866451/1‑150 (MQ=255) tCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGAt > 2:1093508/1‑150 (MQ=255) tCGTGCAATCTCATCCACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGAt < 1:1553559/150‑1 (MQ=255) tGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGac > 2:220838/1‑150 (MQ=255) aaTCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGATAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGacaac < 1:546066/150‑1 (MQ=255) cATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAAt < 1:1082174/150‑1 (MQ=255) aTCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATg > 1:875666/1‑150 (MQ=255) aTCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATg < 2:1101506/150‑1 (MQ=255) tCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCTATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAAGATCTGACGAGCTGTCGGTTGGATGACACCATAATGa > 2:1306069/1‑150 (MQ=255) tCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGa < 1:467898/150‑1 (MQ=255) acacAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCt < 1:30352/150‑1 (MQ=255) acaAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCttt < 2:289844/150‑1 (MQ=255) aaGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTa > 1:1469932/1‑150 (MQ=255) gCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACg > 1:1138368/1‑150 (MQ=255) cGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGc > 2:1372851/1‑150 (MQ=255) cGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGc < 2:65571/150‑1 (MQ=255) cGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGc > 1:1523964/1‑150 (MQ=255) gagaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGcc > 1:1442386/1‑150 (MQ=255) gagaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGcc > 1:1442091/1‑150 (MQ=255) gaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACACCATAATGATCTTTTACGCCCa > 1:1079992/1‑150 (MQ=255) gaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCa > 2:226180/1‑150 (MQ=255) gaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCa > 2:1461189/1‑150 (MQ=255) gaTCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCa > 1:1079986/1‑150 (MQ=255) tcatcTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAgg < 1:1080282/150‑1 (MQ=255) tcatcTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAgg < 1:291377/150‑1 (MQ=255) catcTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAggg > 2:677658/1‑150 (MQ=255) atcTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGc < 2:230167/150‑1 (MQ=255) atcTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGc < 2:619247/150‑1 (MQ=255) tGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATc > 1:533748/1‑150 (MQ=255) tGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATc > 1:588029/1‑150 (MQ=255) tGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATc < 2:415360/150‑1 (MQ=255) ggCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTcc < 1:810136/150‑1 (MQ=255) cccACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCg < 2:758880/150‑1 (MQ=255) cccACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCg < 2:758866/150‑1 (MQ=255) acaGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGgcg > 1:1284673/1‑150 (MQ=255) gTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCCACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCAtc < 2:1103667/150‑1 (MQ=255) acaACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCttcttc < 1:1543339/150‑1 (MQ=255) acaACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCttcttc < 1:1543364/150‑1 (MQ=255) acaACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCttcttc < 2:864938/150‑1 (MQ=255) acaACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCttcttc > 2:1103640/1‑150 (MQ=255) acaACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCttcttc < 2:267116/150‑1 (MQ=255) ccTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCg < 2:588029/150‑1 (MQ=255) ccTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCg < 2:533748/150‑1 (MQ=255) tGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTaa < 1:836161/150‑1 (MQ=255) aGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAtt > 2:2245/1‑150 (MQ=255) aGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAtt > 2:2282/1‑150 (MQ=255) aGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAtt < 2:757927/150‑1 (MQ=255) aGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAtt < 2:1415282/150‑1 (MQ=255) aGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAtt < 2:1471471/150‑1 (MQ=255) gcgcATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAttg > 1:50967/1‑150 (MQ=255) gcgcATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAttg > 1:852228/1‑150 (MQ=255) gcATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAttgtt < 2:1195185/150‑1 (MQ=255) gcATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCAttgtt < 2:277002/150‑1 (MQ=255) aTAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCg < 2:1222190/150‑1 (MQ=255) aCCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGgtg < 2:1431246/150‑1 (MQ=255) ttagccaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAAGGATCTTGTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAg < 2:733425/144‑1 (MQ=255) ttAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAg > 2:1467211/1‑150 (MQ=255) aGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGaa < 2:1650720/150‑1 (MQ=255) aGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGaa < 2:1718178/150‑1 (MQ=255) gAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGaaa > 2:1555320/1‑150 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt < 1:1352253/150‑1 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt > 1:1146704/1‑150 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt > 2:1424493/1‑150 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt > 1:1663429/1‑150 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt > 1:1663430/1‑150 (MQ=255) aaaaTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAAt > 2:1231857/1‑150 (MQ=255) aTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCgg < 2:1591249/150‑1 (MQ=255) aTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCgg < 2:1591308/150‑1 (MQ=255) aTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCgg < 2:267187/150‑1 (MQ=255) aTTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCgg < 2:790721/150‑1 (MQ=255) tttATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGt < 1:660958/150‑1 (MQ=255) tttATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGt < 1:1019235/150‑1 (MQ=255) ttATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTa < 2:1674228/150‑1 (MQ=255) tATCGTTATCCCAACACTGAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTaa < 2:762556/150‑1 (MQ=255) gTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGGAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATAcc > 1:1169197/1‑150 (MQ=255) aTCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTaa > 1:1644067/1‑150 (MQ=255) aTCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTaa > 1:69208/1‑150 (MQ=255) ccAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATgg < 2:940938/150‑1 (MQ=255) ccAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATgg < 2:944479/150‑1 (MQ=255) ccAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATgg < 2:1016064/150‑1 (MQ=255) ccAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGCGTAGAAATCGGTAATACCTAATgg < 2:859019/150‑1 (MQ=255) aaCACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCt > 1:390563/1‑150 (MQ=255) acacTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTc < 1:443631/150‑1 (MQ=255) acacTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTc < 1:443632/150‑1 (MQ=255) cTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTCATACCGAATGGCTCAAg > 2:662397/1‑150 (MQ=255) cTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTCATACCAAATGGCTCAAg > 2:662342/1‑150 (MQ=255) ttAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAgg > 2:861266/1‑150 (MQ=255) aaaTATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAAt > 2:708819/1‑64 (MQ=255) aaaTATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAAt < 1:708819/64‑1 (MQ=255) aaaTATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGAc < 1:536166/150‑1 (MQ=255) aaaTATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGAc < 2:923067/150‑1 (MQ=255) aaTATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGAcc < 2:1585349/150‑1 (MQ=255) atCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGAt < 1:2282/150‑1 (MQ=255) atCTTACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGAt < 1:2245/150‑1 (MQ=255) tGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATaaa < 1:797501/150‑1 (MQ=255) | TTTTGTTTCGCAACCTCGTGCAATCTCATCTACACAAGCGAGATCATCTGCCGAGGGCCCACAGGTTAGCACAACCTGATAGCCTCGCTGTTGCAGCGCATCGATAACCTTAGAAAATTTATCGTTATCCCAACACTTAAATATCTGACGCGCTGTCGGTTGGATGACAACATAATGATCTTTTACGCCCAGGGCATCTAATTCCCGGCGCATCTTCTTCCAGCAATCTTCGGCGTAACTCATTGTTGTGTCGGTGTAGAAATCGGTAATACCTAATGGCTCAAGGACCGATAAA > NC_000913/3807409‑3807703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |