| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4101490 | 218 (0.860) | 6 (0.020) | 5/268 | NT | 2.7% | intergenic (+60/‑200) | sodA/kdgT | superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter |
| ? | NC_000913 | = 4101503 | 225 (0.920) | intergenic (+73/‑187) | sodA/kdgT | superoxide dismutase, Mn/2‑keto‑3‑deoxy‑D‑gluconate transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4101337‑4101490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccaCCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCGGA < NC_000913/4101503‑4101355 GAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGA > 1:1461575/1‑150 AAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAA < 1:3534402/150‑1 AATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAAC < 2:890205/150‑1 AATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAAC > 1:863161/1‑150 ATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACC > 1:2144737/1‑150 ATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACC > 1:2144800/1‑150 TTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCA > 2:1249114/1‑150 TTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCA > 2:1249217/1‑150 TTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCA > 2:257531/1‑150 CGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCACCGCCGTTGGCGATGG < 2:2113837/150‑1 AAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCACCGCCGTTGGCGATGGTTCATTTTTTAA < 1:4193345/150‑1 AAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCACCGCCGTTGGCGATGGTTCATTTTTTAA < 2:1203266/150‑1 AGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCACCGCCGTTGGCGATGGTTCATTTTTTAAG < 2:2226430/150‑1 ACTGGGACGAAGCAGCGTCACGTGTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGCATAGGCCGCATATCAGCTGAAAAAATGAACCACCGCCGTTGGCGATGGTTCAATTTTTAAGCTGATATGCGGCCTATACGC < 2:14117/150‑1 GGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCA < 2:73559/150‑1 ACCACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCC < 1:221788/150‑1 CCACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCG < 2:3438012/150‑1 CCACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCG > 2:4248136/1‑150 CACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCGG > 2:1599453/1‑150 ACCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCGGA < 2:2457298/150‑1 GAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAATCATTTGCCGCCTGCTGCAATGAGGCGTATAGGCCGCATATCAGCTTAAAAAATGAACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4101337‑4101490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccaCCGCCGTTGGCGATGGTTCATTTTTTAAGCTGATATGCGGCCTATACGCCTCATTGCAGCAGGCGGCAAATGATTATTTTTTCGCCGCAAAACGTGCCGCTGCTTCGTCCCAGTTCACCACGTTCCAGAACTCTTTAATGTAGTCCGGA < NC_000913/4101503‑4101355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |