New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4189604264 (1.040)4 (0.020) 4/258 NT 1.5% intergenic (+31/‑182) rpoC/yjaZ RNA polymerase, beta prime subunit/stationary phase growth adaptation protein
?NC_000913 = 4189608 266 (1.130)intergenic (+35/‑178) rpoC/yjaZ RNA polymerase, beta prime subunit/stationary phase growth adaptation protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 327 total aligned reads displayed.

CGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATA  >  NC_000913/4189460‑4189753
                                                                                                                                                |                                                                                                                                                       
cGTCGCCGTGCTGCGGGTGACGCTCCGGCCGCACCGCAGGTGACTGCAGACGACGCATCTGCCAGCCAGGCAGAACCGCTGAACGCAGGTCTGGGCGGGTCTGATAACGAGTAATCGTTAATCCGCAAAGAACGAAAAAACCCGCTTcgg                                                                                                                                                    <  2:2875976/150‑1 (MQ=255)
cGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGg                                                                                                                                                    >  2:2737817‑M2/1‑149 (MQ=255)
 gTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTGATCCGCAAATAACGTAAAAACCCGCTTCGgc                                                                                                                                                   <  2:1756974‑M2/150‑3 (MQ=255)
 gTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGgc                                                                                                                                                   <  2:1530994‑M2/150‑3 (MQ=255)
   cGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGgcgg                                                                                                                                                 >  1:2281357‑M2/1‑146 (MQ=255)
      cGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGgcgggtt                                                                                                                                              <  2:867335‑M2/150‑8 (MQ=255)
       gTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCcgaagcgggttt                                                                                                                                             <  1:333062‑M1/150‑13 (MQ=255)
         gctgcGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGgcgggttttt                                                                                                                                           >  1:2768872‑M2/1‑140 (MQ=255)
             cGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTAt                                                                                                                                     <  1:1099198/150‑1 (MQ=255)
              gggTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATg                                                                                                                                    <  2:609939/150‑1 (MQ=255)
              gggTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATg                                                                                                                                    <  2:3307502/150‑1 (MQ=255)
              gggTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATg                                                                                                                                    <  2:1939656/150‑1 (MQ=255)
                 tGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATgggg                                                                                                                                 <  2:2091133/150‑1 (MQ=255)
                 tGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATgggg                                                                                                                                 <  1:2592107/150‑1 (MQ=255)
                    aGCTCCGGCTGCACCGCAGGTGACTGCATAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGa                                                                                                                              <  1:1933769/150‑1 (MQ=255)
                     gCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAg                                                                                                                             >  2:670817/1‑150 (MQ=255)
                       tCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGC‑‑TTTTATTATGGGGGGAgat                                                                                                                           >  2:2762221/1‑148 (MQ=255)
                        ccGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGttt                                                                                                                          >  2:4063766/1‑150 (MQ=255)
                        ccGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGttt                                                                                                                          >  2:1177904/1‑150 (MQ=255)
                          ggCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAg                                                                                                                        >  2:2451646/1‑150 (MQ=255)
                             tGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGa                                                                                                                     >  1:557661/1‑150 (MQ=255)
                                 ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAaga                                                                                                                 <  1:199711/150‑1 (MQ=255)
                                 ccGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAaga                                                                                                                 >  1:3442471/1‑150 (MQ=255)
                                  cGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAagag                                                                                                                >  1:2008055/1‑150 (MQ=255)
                                  cGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTGTTTTATGGGGGGAGTTTAGGGAAagag                                                                                                                >  2:4107267/1‑150 (MQ=255)
                                       gTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAttt                                                                                                           >  1:3039837/1‑150 (MQ=255)
                                       gTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAttt                                                                                                           >  1:892667/1‑150 (MQ=255)
                                       gTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCAttt                                                                                                           >  1:1013649/1‑150 (MQ=255)
                                           cTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCa                                                                                                       <  2:3507916/150‑1 (MQ=255)
                                            tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg                                                                                                      >  1:3253368/1‑150 (MQ=255)
                                            tGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAg                                                                                                      >  1:2494989/1‑150 (MQ=255)
                                              cAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGaa                                                                                                    >  2:3445920/1‑150 (MQ=255)
                                                 aagaCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAatat                                                                                                 >  1:3940382/1‑150 (MQ=255)
                                                     cGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTaa                                                                                             <  2:529890/150‑1 (MQ=255)
                                                       cATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTCATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTCAgg                                                                                           <  1:1519140/150‑1 (MQ=255)
                                                        aTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGa                                                                                          >  2:563940/1‑150 (MQ=255)
                                                             ccAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTTTCAGAATATTTAAGTAATTTc                                                                                     >  2:466771/1‑150 (MQ=255)
                                                              cAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCt                                                                                    <  1:1294460/150‑1 (MQ=255)
                                                              cAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCt                                                                                    >  2:1114877/1‑150 (MQ=255)
                                                               aGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTg                                                                                   >  1:3358266/1‑150 (MQ=255)
                                                               aGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTg                                                                                   >  1:1217219/1‑150 (MQ=255)
                                                                gCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGa                                                                                  <  1:3737055/150‑1 (MQ=255)
                                                                     gCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACt                                                                             >  1:3864239/1‑150 (MQ=255)
                                                                      cAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTc                                                                            <  2:4182008/150‑1 (MQ=255)
                                                                      cAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTc                                                                            <  1:616978/150‑1 (MQ=255)
                                                                       aGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAGGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCa                                                                           >  1:4055440/1‑150 (MQ=255)
                                                                       aGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCa                                                                           <  1:3916522/150‑1 (MQ=255)
                                                                        gAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCAt                                                                          >  2:1028285/1‑150 (MQ=255)
                                                                          aCTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGACTTTCTGAATACTCATaa                                                                        >  1:2118608/1‑150 (MQ=255)
                                                                          aCTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATaa                                                                        <  2:2597399/150‑1 (MQ=255)
                                                                              ctgAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCaa                                                                    >  1:2389515/1‑150 (MQ=255)
                                                                               tgAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAAt                                                                   <  1:1802647/150‑1 (MQ=255)
                                                                                 atcGCAGGTCTGGGCGGTTCTGATAACGTTTAATCGTTAATCCGCAATTAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGTGTTTAGGGAAAGAGCATTTGTCTGAATATTTAAGGAATTTCTGAATTCTCATAATCTATGt                                                                 <  2:3962713/148‑1 (MQ=255)
                                                                                 aaCGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGt                                                                 >  2:86362/1‑150 (MQ=255)
                                                                                  aCGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTa                                                                <  1:464887/150‑1 (MQ=255)
                                                                                    gCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGCATTTCTGAATACTCATAATCAATGTaga                                                              >  1:3115149/1‑150 (MQ=255)
                                                                                                    cTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTg                                              >  2:888327/1‑150 (MQ=255)
                                                                                                     tGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGGTTTTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCt                                               >  2:1812469/1‑150 (MQ=255)
                                                                                                     tGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGa                                             >  2:767837/1‑150 (MQ=255)
                                                                                                     tGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGa                                             >  2:2031714/1‑150 (MQ=255)
                                                                                                     tGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGa                                             >  2:3410606/1‑150 (MQ=255)
                                                                                                     tGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGa                                             >  1:2887403/1‑150 (MQ=255)
                                                                                                      gATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGaa                                            <  1:3653464/150‑1 (MQ=255)
                                                                                                       aTAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGaaa                                           <  2:1697584/150‑1 (MQ=255)
                                                                                                       aTAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGaaa                                           <  1:1760853/150‑1 (MQ=255)
                                                                                                        tAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAac                                          >  1:4253394/1‑150 (MQ=255)
                                                                                                         aaCGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGTGCATTTGTCAGTATATTTTAGGAATTTCTGAATAGTCATAATCAATGTAGAGATGACTAATATCGTGAAact                                         >  1:3622034/1‑150 (MQ=255)
                                                                                                         aaCGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAact                                         >  2:2209958/1‑150 (MQ=255)
                                                                                                         aaCGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAact                                         <  2:3655257/150‑1 (MQ=255)
                                                                                                          aCGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGACTTTCTGAATACTCATAATCAATGTCGAGATGACGAATATCCTGAAactg                                        >  2:620898/1‑150 (MQ=255)
                                                                                                           cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTTAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga                                       <  2:235214/150‑1 (MQ=255)
                                                                                                           cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga                                       <  1:2837816/150‑1 (MQ=255)
                                                                                                           cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga                                       <  1:2238941/150‑1 (MQ=255)
                                                                                                           cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga                                       <  1:1607458/150‑1 (MQ=255)
                                                                                                           cGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactga                                       <  1:349118/150‑1 (MQ=255)
                                                                                                             aGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAactgact                                     >  2:2589560/1‑150 (MQ=255)
                                                                                                               tAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAActgactga                                   <  1:1028285/150‑1 (MQ=255)
                                                                                                               tAATCGATAATCCGCAAATAACCTAAAAACCCGCTTCCGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAACGAATTACTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAActgactga                                   <  2:2313710/150‑1 (MQ=255)
                                                                                                                aaTCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGaa                                  <  1:1530994/150‑1 (MQ=255)
                                                                                                                    gTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTaa                              >  2:3035348/1‑150 (MQ=255)
                                                                                                                     ttAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTCAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAAt                             >  2:3120148/1‑150 (MQ=255)
                                                                                                                      tAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGTGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTATAGATGACTAATATCCTGAAACTGACTGAACTAAtt                            <  1:1196255/150‑1 (MQ=255)
                                                                                                                      tAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAAtt                            <  2:3887876/150‑1 (MQ=255)
                                                                                                                         tCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAg                         <  1:2165735/150‑1 (MQ=255)
                                                                                                                         tCCGCAAATAACGAAAAAACCCGCTTCGGCGGG‑‑ATTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGACAGAATAATAAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAg                         <  1:3209494/150‑1 (MQ=255)
                                                                                                                            gCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCa                      >  1:1237932/1‑150 (MQ=255)
                                                                                                                                  aaCGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCg                <  2:3711856/150‑1 (MQ=255)
                                                                                                                                     aaacaaacccgCcgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgca               <  2:1984754‑M1/146‑139 (MQ=255)
                                                                                                                                      tAAAAACCCGCTTCGgcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcag              <  2:1076410‑M2/150‑136 (MQ=255)
                                                                                                                                      tAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCaa            <  1:3748048/150‑1 (MQ=255)
                                                                                                                                       aaaaaCCCGCcgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagc             >  1:1380644‑M1/1‑10 (MQ=255)
                                                                                                                                        aaaaCCCGCcgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagca            >  1:3679186‑M1/1‑9 (MQ=255)
                                                                                                                                          aaCCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGAt        >  2:2169076/1‑150 (MQ=255)
                                                                                                                                             ccgccgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagcacggcg       >  1:941303‑M1/1‑4 (MQ=255)
                                                                                                                                             ccGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTAAGAATATTTAAGGAATTTATTAATACTCATAATCAATTTATAGATGAATAATATCCTGAAACAGACTTAACTAATTGAGTCAAACTCGGCAAGGAttag     >  1:1456694/1‑148 (MQ=255)
                                                                                                                                              cGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGa    <  1:2226943/150‑1 (MQ=255)
                                                                                                                                               gccgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagcacggcgac     <  2:1369292‑M1/150‑149 (MQ=255)
                                                                                                                                               gccgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagcacggcgac     <  2:1530921‑M1/150‑149 (MQ=255)
                                                                                                                                                ccgaagcgggtttttacgttatttgcggattaacgattactcgttatcagaaccgcccagacctgcgttcagcagttctgccaggctggcagatgcgtcttctgcagtcacctgcggtgcagccggagcttcacccgcagcacggcgacg    >  2:444129‑M1/1‑1 (MQ=255)
                                                                                                                                                cTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATa  <  1:814112/150‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                       
CGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCGGCGGG‑‑TTTTTTTATGGGGGGAGTTTAGGGAAAGAGCATTTGTCAGAATATTTAAGGAATTTCTGAATACTCATAATCAATGTAGAGATGACTAATATCCTGAAACTGACTGAACTAATTGAGTCAAACTCGGCAAGGATTCGATA  >  NC_000913/4189460‑4189753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.