| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,907,574 | T→C | 5.2% | D2G (GAC→GGC) | phoU ← | negative regulator of PhoR/PhoB two‑component regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,907,574 | 0 | T | C | 5.2% | 1083.2 / 28.6 | 326 | D2G (GAC→GGC) | phoU | negative regulator of PhoR/PhoB two‑component regulator |
| Reads supporting (aligned to +/- strand): ref base T (147/161); new base C (6/11); total (154/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 333 total aligned reads displayed.
TCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAG > NC_000913/3907425‑3907723 | cGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTc < 1:1090118/150‑1 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCa > 1:2606743/1‑150 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCa > 1:3679355/1‑150 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCa > 1:3730912/1‑150 (MQ=255) gATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATaa > 1:3593795/1‑150 (MQ=255) cGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGc < 2:4021224/150‑1 (MQ=255) gCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCa < 1:2805796/150‑1 (MQ=255) cTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCAc < 1:809235/150‑1 (MQ=255) tGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGACCTATGTTTATTAAGATTGAGACTGTCCATATCGCACt > 1:4092595/1‑150 (MQ=255) tCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGTCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTcc > 1:1271872/1‑150 (MQ=255) cTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTg < 1:3392038/150‑1 (MQ=255) cTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTg > 2:3124181/1‑150 (MQ=255) cTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTg > 2:3489806/1‑150 (MQ=255) tGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGa > 1:2488457/1‑150 (MQ=255) ggTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGaa > 1:4025022/1‑150 (MQ=255) gTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAAt > 2:3416414/1‑150 (MQ=255) tGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAAc < 1:781349/150‑1 (MQ=255) tGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAAc < 2:50388/150‑1 (MQ=255) gCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGTGACTGTCCATAACGCACTCCTGAATCAAcc > 2:1841211/1‑150 (MQ=255) gCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAAcc > 2:2511421/1‑150 (MQ=255) gcgGTGATTGCATCAGAAAGCTGCTGCTCCACTATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAAc > 2:2878414/1‑150 (MQ=255) gcgGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAAc < 2:3450073/150‑1 (MQ=255) gATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCg < 2:1347931/150‑1 (MQ=255) gCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGa < 2:3349025/150‑1 (MQ=255) cATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGAt > 2:3839860/1‑150 (MQ=255) cATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGAt > 2:194566/1‑150 (MQ=255) aTCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATg < 2:2030530/150‑1 (MQ=255) tCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGt > 2:4033340/1‑150 (MQ=255) tCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGt > 1:3962428/1‑150 (MQ=255) tCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGACATCACCTGCGAGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTGTATTAAGATTGGGACTGTCCATAACGCACACCTGAATAAACCGTAACGACCGGTGATGt > 1:3566477/1‑150 (MQ=255) gctgctCCACCATGCCGCCCTTGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCAGGAAATATGTTTATTAAGATTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAAAGACCGGTGATGTAGTCTTCtgt < 2:1776871/150‑1 (MQ=255) gctCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttg > 2:4159519/1‑150 (MQ=255) ctCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgt < 2:3994023/150‑1 (MQ=255) ctCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgt < 2:117662/150‑1 (MQ=255) tCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgtt > 2:1634588/1‑150 (MQ=255) ccaccaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCTGTTCGGCTTTGAACTGGCCGGAATTATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTTAATCAACCGTAACGACCGGTGATGTAGTCTTCTgtttgttt < 1:1410860/150‑1 (MQ=255) ccaccaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCAAAACGCACTCCTTAATCAACCGTAACGACCGGTGATGTAGTCTTCTgtttgttt < 1:544357/150‑1 (MQ=255) caccaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttc > 1:1975461/1‑150 (MQ=255) caTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttcttc > 1:1002386/1‑150 (MQ=255) caTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttcttc < 2:1017302/150‑1 (MQ=255) gccCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGc > 1:1553410/1‑150 (MQ=255) cATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTg < 2:285461/150‑1 (MQ=255) tGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGt < 2:956447/150‑1 (MQ=255) ggTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTg < 2:537244/150‑1 (MQ=255) tcatcaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGaa > 1:4107798/1‑150 (MQ=255) catcaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAAc < 2:3892010/150‑1 (MQ=255) catcaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAAc < 2:2127116/150‑1 (MQ=255) catcaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAAc > 1:1382790/1‑150 (MQ=255) atcaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACa < 2:3029593/150‑1 (MQ=255) caCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGa > 1:1451112/1‑150 (MQ=255) aCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGAt > 2:1293951/1‑150 (MQ=255) ccTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATc < 2:608881/150‑1 (MQ=255) cTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCg < 1:2340582/150‑1 (MQ=255) tgcgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGt > 1:242265/1‑150 (MQ=255) tgcgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGt < 2:2483975/150‑1 (MQ=255) tgcgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGAGGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGACCAGATCGt > 2:3530887/1‑150 (MQ=255) gcgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTc < 2:2374412/150‑1 (MQ=255) gtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCg > 2:2899066/1‑150 (MQ=255) cgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCgtgt < 1:2682493/150‑1 (MQ=255) gATACTGTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTg < 2:2202600/150‑1 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGaa > 1:4198475/1‑150 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGaa > 1:4183780/1‑150 (MQ=255) ttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTCACGACCGGTGATGTAGTCGTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAAc > 2:3598249/1‑150 (MQ=255) tCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACt < 2:1451112/150‑1 (MQ=255) gTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaat < 1:3332345/150‑1 (MQ=255) cGGCGTTTAACTGGCCGTAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCTTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTTGTTAACAGATCTTCCGTGTTGCTTAACtcaatcaa < 2:3289615/150‑1 (MQ=255) cGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTc > 2:155193/1‑150 (MQ=255) cGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTc > 1:3157926/1‑150 (MQ=255) gTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCg > 2:4250350/1‑150 (MQ=255) gAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGccc < 2:3429107/150‑1 (MQ=255) aaCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCa < 1:3017931/150‑1 (MQ=255) aaCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCa < 2:1570753/150‑1 (MQ=255) aCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAg < 2:1484909/150‑1 (MQ=255) gCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTAc > 2:4121026/1‑150 (MQ=255) ccGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACa > 2:3785989/1‑150 (MQ=255) cGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACAt > 1:861532/1‑150 (MQ=255) aaTATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAAc < 2:2595901/150‑1 (MQ=255) atGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGcc > 1:622343/1‑150 (MQ=255) tGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCg > 2:271352/1‑150 (MQ=255) tGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCg < 2:3100735/150‑1 (MQ=255) gTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCgt < 2:118928/150‑1 (MQ=255) gTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCgt > 1:1668449/1‑150 (MQ=255) tttATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCgtg > 1:1205334/1‑150 (MQ=255) ttattaAGATTTAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACGGGTGTTGTATTCTTCTGTTTGTTTCTTCGCTGGTTTGGTGAACAGATCGTCGGTTTTGCTGAACTCAATCAATTCGCCCTGGTACATACACGCCgtgt < 1:1634588/150‑1 (MQ=255) ttattaAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCgtgt < 2:80042/150‑1 (MQ=255) tattaAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGtgtg < 2:92427/150‑1 (MQ=255) ttaAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGt > 1:918321/1‑150 (MQ=255) taAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGTTGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAAGAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTc > 1:2896701/1‑150 (MQ=255) taAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTc < 2:3692138/150‑1 (MQ=255) gtttGAGACTGTCCATAACGCACTCCTGAATCAACCTTAACGACCGGTGTTGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGTTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGa < 1:3493447/148‑1 (MQ=255) ttttagaCTGTCAATAACGCACTCCTGAATCAACCGTAACGACCGGTTATTTTTTCTTATGTTTGTTTCTTCGGTGGCTTGGTTAACAGATCGTCGGTGTTGCTTAACTCAATAAATTCGCCCAGTTAAATAAACGCCGTGTGGTCGGaa < 1:427918/146‑1 (MQ=255) aTTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaa < 2:263023/150‑1 (MQ=255) aTTGAGACTGCCCATACCGCACTCCTTAAACAACCGTAACGACCGGTTATGTAGTCTTCTGTTTGTTTCTGCGCTGGGTTGGTGAACTGATCGTCCGTGTTGCTGAACTCAATCATTTCGCCCTTTTACATAAACGCCGTGTGGTCGGaa < 1:1930156/150‑1 (MQ=255) aTTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaa > 2:1253201/1‑150 (MQ=255) aTTGAGACCCCCCATACCGCACTCCTCAATAAACCGAAACGACCGGTGATGTAGTCTTCTTTTTGTTTCTTCGCTGGCTTGGTGAACATATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCTGGTACATAAACGCCGTGTGGTCGGaa < 1:1829525/150‑1 (MQ=255) ttGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaac > 1:2955320/1‑150 (MQ=255) gaCTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAAcg > 2:231697/1‑150 (MQ=255) tGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACgcgc > 1:2027970/1‑150 (MQ=255) tCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAg > 1:3809482/1‑150 (MQ=255) tCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAg > 1:2265383/1‑150 (MQ=255) | TCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAG > NC_000913/3907425‑3907723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |