| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2714956 | 60 (1.010) | 4 (0.070) | 4/264 | NT | 6.2% | coding (365/882 nt) | yfiE | putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | = 2714976 | 63 (1.110) | coding (345/882 nt) | yfiE | putative DNA‑binding transcriptional regulator | |||||
AATTTGCGGTGAAGCCACCAGCACCAGTGATTGTTCACCCAACTCTCGTCGATTCAGAGCATCATCATTCCCTACACGATAAAAGACGCCAACATCGGCCTCATCATTCAGTAGCGCATCACGGATCACGTAACAGTTCAGCGACTGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2714805‑2714956‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacgCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAACTGTTACGTGATCCGTGATGCGCTACTGAATGATGAGGCCGATGTTGGCGTCTTTTATCGTGTAGGGAATGATGATGCTCTGAATCGACGA < NC_000913/2714976‑2714850 AATTTGCGGTGAAGCCACCAGCACCAGTGATTGTTCACCCAACTCTCGTCGATTCAGAGCAACATCATTCCCTACACGATAAAAGACGCCAACATCGGCCGCATCATTCAGTAGCGCATCACGGATCACGTCACAGTACACCGACTGCA > 2:378783/1‑149 ATTTGCGGTGAAGCCACCAGCACCAGTGATTGTTCACCCAACTCTCGTCGATTCAGAGCATCATCATTCCCTACACGATAAAAGAGGCCAACATCGGCCGCATCATTCAGTAGCGCATCACGGATCACGTAACAGTTCAGCGACTGCAA < 2:563024/149‑1 AGTGATTGTTCACCCAACTCTCGTCGATTCAGAGCATCATCATTCCCTACACGATAAAAGACGCCAACATCGGCCTCATCATTCAGTAGCGCATCACGGATCACGTAACAGTTCAGCGACTGCAACGCGCCCCAAAAGTGCGTTTATCG > 2:104879/1‑149 CACCCAACTCTCGTCGATTCAGAGCATCATCATTCCCTACACTATAAAAGACGCCAACATCGGCCTCATCATTCAGTAGCGCATCACGGATCACGTAACAGTTCAGCGACTGCAACGCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGC < 1:528025/149‑1 AACTCTCGTCGATTCAGAGCATCATCATTCCCTACACGATAAAAGACGCCAACATCGGCCTCATCATTCAGTAGCGCAGCACGGCTCACGTAAGAGTTCAGCGACTGCAACGCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAAC < 1:104879/149‑1 TAACAGTTCAGCGACTGCAACGCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAACTGTTACGTGATCCGTGATGCGCTACTGAATGATGAGGCCGACGTTGGCGTCTTTTATCGTGTAGGGAATGATGATGCTCTGAATCGACGA > 2:164366/1‑149 AATTTGCGGTGAAGCCACCAGCACCAGTGATTGTTCACCCAACTCTCGTCGATTCAGAGCATCATCATTCCCTACACGATAAAAGACGCCAACATCGGCCTCATCATTCAGTAGCGCATCACGGATCACGTAACAGTTCAGCGACTGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2714805‑2714956‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacgCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAACTGTTACGTGATCCGTGATGCGCTACTGAATGATGAGGCCGATGTTGGCGTCTTTTATCGTGTAGGGAATGATGATGCTCTGAATCGACGA < NC_000913/2714976‑2714850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |