| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,079,615 | C→T | 6.0% | intergenic (‑285/+29) | cmtB ← / ← tktA | putative mannitol‑specific enzyme IIA component of PTS/transketolase 1, thiamine triphosphate‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,079,615 | 0 | C | T | 6.0% | 241.2 / 6.5 | 102 | intergenic (‑285/+29) | cmtB/tktA | putative mannitol‑specific enzyme IIA component of PTS/transketolase 1, thiamine triphosphate‑binding |
| Reads supporting (aligned to +/- strand): ref base C (41/52); new base T (2/4); total (45/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.60e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
ATAGATATAACAACAAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAG > NC_000913/3079469‑3079763 | ataGATATAACAACAAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGa > 1:846585/1‑149 (MQ=255) aGATATAACAACAAATGTCAATACGCATTTCGTGATGCATATTACATAATTGATATTTATTGCATTTAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAg < 1:662691/149‑1 (MQ=255) atatAACAACAAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCg > 1:345911/1‑149 (MQ=255) taACAACAAATGTCAATACGCATATCTTGATGCATATTACATTATTGATATTTATTGCATATAAATATTTGTGATCTAAAACACGCATTATCTATTGCTTGTCCGCAAACGGACATATCAAGGAAATAAAAAAGTTAGCCGAAGCGAcc > 2:751313/1‑149 (MQ=255) aacaacAAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGTTAATAAAAAAGTTCTCAGAAGAGACCt > 2:594484/1‑149 (MQ=255) acaacaAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTAATGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAAAGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCtt > 2:480919/1‑149 (MQ=255) caacaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCTTCGGCGACCttt < 2:733753/149‑1 (MQ=255) caacaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCttt > 2:935022/1‑149 (MQ=255) aacaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCTTCGGCGACCtttt < 1:511729/149‑1 (MQ=255) aacaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCtttt < 2:38295/149‑1 (MQ=255) aacaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCAAAGCGACCtttt < 1:867239/149‑1 (MQ=255) acaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTCTTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCTTCGGCGACCttttt < 1:788884/149‑1 (MQ=255) acaaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCttttt < 2:846585/149‑1 (MQ=255) caaATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCTTCGGCGACCtttttt < 1:1005140/149‑2 (MQ=255) caaATGTCAATACGCATATCGTGATCCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTa > 2:175593/1‑149 (MQ=255) aaaTGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCCAACGGACATATCAAGGTAATAAAAAAGGGCGCCGAAGCGACCTTTTTAc < 1:496376/149‑1 (MQ=255) aaaTGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCATTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCTCCGAAGCGACCTTTTTAc > 1:954251/1‑149 (MQ=255) aTGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATCGCATATAAATATTTGTGATATACAACACGCCTTATCTATTGCTTGTCCGCAAACGGAAATATCAAGGTAATAAAAAAGGTCGCCGAAGTGACCTTTTTAcac > 1:77190/1‑147 (MQ=255) cAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGaaa < 1:158537/149‑1 (MQ=255) cGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTa < 1:220532/149‑1 (MQ=255) atatCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGCCGCCGAAGCGACCTTTTTACCCGAAATGCTAAtt < 1:476774/149‑1 (MQ=255) aaatCGTGATGCATATTAAATAATTGATATTTATTGAATATAAATATTTGTGATCTACAACACGCATAATATATTCCTTGTCAGCAAACGGACATAAAAAGGTAATAAAAAAGGTCGCCGAAGCTACCTTATTACAAGAAATTCTAAta > 2:380708/3‑148 (MQ=255) atagttaTGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACCACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAc < 1:488181/143‑1 (MQ=255) atCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACCCGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAACAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAc < 2:960170/149‑1 (MQ=255) atCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAc < 1:1011010/149‑1 (MQ=255) tCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAca > 2:80734/1‑149 (MQ=255) cGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAcag < 2:345911/149‑1 (MQ=255) tGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAcagca < 2:659172/149‑1 (MQ=255) tGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGAGACCTTTTTACCCGAAATGCTAATTAcagca > 1:189446/1‑149 (MQ=255) gATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAcagcag < 1:642181/149‑1 (MQ=255) gCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTc > 1:905553/1‑149 (MQ=255) cATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACACGAAATGCTAATTACAGCAGTTCt > 2:644978/1‑149 (MQ=255) atatTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCCTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCtt < 1:58369/149‑1 (MQ=255) atTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCtttt < 1:512059/149‑1 (MQ=255) atTACATAATAGATATTTATTGCATATAAATATTTGTGATCTACAACACTCCTTATCTATTGCTTGTCCGCAAACGGAAATATCAAGGTAATAAAAAAGGGCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCtttt < 2:175903/149‑1 (MQ=255) aCATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATAAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCt > 1:115787/1‑149 (MQ=255) tAATTGATAATTATTGCATATAAATTTTTGTGATCTACAACACGCCTTATCTATTGCTTGGCCGCAAACGGACATATCAAGGTAATAAAAAAGGGCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTc < 2:1015140/149‑1 (MQ=255) aaTTGCTATTTATTGCATATAAATAATTGTTATCTACAAAACGCCTTATCTTTTGCTTGTCCGCATACGGACATATCAAGGTAATACAAAAGGTCTCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTct < 1:575350/149‑2 (MQ=255) aaTTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCg < 1:575348/149‑1 (MQ=255) aTTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGc > 1:822832/1‑149 (MQ=255) tGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCTCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGcaa < 1:17766/149‑1 (MQ=255) tgaatatAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATc < 1:302139/146‑1 (MQ=255) tGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATc < 1:889170/149‑1 (MQ=255) tGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATc < 2:34863/149‑1 (MQ=255) gCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATAACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCa > 2:518391/1‑149 (MQ=255) tataAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACa > 1:929626/1‑149 (MQ=255) ataAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATATAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAg < 2:817785/149‑1 (MQ=255) taAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGt < 1:735570/149‑1 (MQ=255) aaaTATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTg < 1:935022/149‑1 (MQ=255) aaaTATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTg > 1:55908/1‑149 (MQ=255) atatTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGaa > 2:20044/1‑149 (MQ=255) gtgATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACTTATCAAGGTAATAAAAAAGGTCGCCGCAGCGACCTGAGTACCCGAAATGCTAAGTACCGCCGTGCTTTTGCTTACGCAACAACGTTATCAACAGTGATGCCGac > 1:575862/1‑148 (MQ=255) tgATCTACAACACACCTTATCTATTGCTTGTCCTCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCTACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAAc < 2:444577/149‑1 (MQ=255) tCTACAACTCGCTTTATGTTTTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAATGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAGAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAActct < 2:954251/149‑1 (MQ=255) tCTACAACAAGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCAGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAActct > 2:512190/1‑149 (MQ=255) cTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCtt < 2:951417/149‑1 (MQ=255) cTACAACACGCCTTATCTAATGCTTGTCCGCAAACGGACATAACAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTAACCGAAATGCTAATTACAGCACTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCtt > 1:706125/1‑149 (MQ=255) ttcaacaCGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTc < 2:464053/147‑1 (MQ=255) tACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTc < 2:11602/149‑1 (MQ=255) tACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTc < 2:799249/149‑1 (MQ=255) acaacaCGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCa < 2:142640/149‑1 (MQ=255) caacaCGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCaa > 1:154693/1‑149 (MQ=255) aacaCGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCaaa > 1:810866/1‑149 (MQ=255) acacGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAAc > 2:88778/1‑149 (MQ=255) acGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAAcag < 1:69491/149‑1 (MQ=255) ccTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAAcagcag < 2:651818/149‑1 (MQ=255) ctgaTCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCAGAAGCGACCTTTTTACACGAATTGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGCACTCTTCAAACagcagc > 2:280788/4‑149 (MQ=255) tCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTg > 1:650207/1‑149 (MQ=255) aTTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCg > 1:674680/1‑149 (MQ=255) aTTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCg > 2:1005403/1‑149 (MQ=255) cTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCTGTTGTTTTGCTTTCGCAACTACGTTATCAACAGTGAAGGCGAACTCTTCAAACAGCAGCTCTGCCGGAGc > 1:655059/1‑149 (MQ=255) cTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCAGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAgt < 2:185022/149‑2 (MQ=255) ttGTCCGCATACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCa < 1:589824/149‑1 (MQ=255) tCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGACCTCTTCAAACAGCAGCTCTGCCGGAGCAGAt > 2:207401/1‑149 (MQ=255) gCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCa > 2:331857/1‑149 (MQ=255) gCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCa > 1:718086/1‑149 (MQ=255) cAAACGGACATATCAAGGTATTAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTATTTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCAc < 2:164348/149‑1 (MQ=255) cAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCAc < 1:175593/149‑1 (MQ=255) aaaCGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCAcc < 2:292363/149‑1 (MQ=255) aaaCGGACATATCAAGGTAATAAAAAAGGACGCCGAAGCGACCGTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCACCATTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCCGATTCAcc > 1:913167/1‑149 (MQ=255) aCATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTCCCCGAAATGCTAATTACAGCAGTTGTTTTGCTTTCGCACCCACGTTATCAACAGTGAAGCCGAACTCTTGAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggt > 1:676605/1‑149 (MQ=255) aCATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggt < 2:822832/149‑1 (MQ=255) cATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggtg < 2:674680/149‑1 (MQ=255) aatatCAAGGTAATAAATTAGGTCGCCGAAGTGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggtg < 2:77190/148‑1 (MQ=255) tatCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggtggt > 1:503538/1‑149 (MQ=255) tatCAAGGTAATAAAAAAGGGCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAggtggt < 1:80734/149‑1 (MQ=255) atCAAGTAAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCGAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCTGATTCACCGAAggtggta > 2:389913/1‑148 (MQ=255) atCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTc > 2:512224/1‑149 (MQ=255) atCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTAAAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTc < 2:87830/149‑1 (MQ=255) tCAAGGTAATAAAAAAGGTCGCCGAAGCGCCCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCa > 2:887476/1‑149 (MQ=255) cAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGct < 1:861854/118‑1 (MQ=255) cAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGct > 2:861854/1‑118 (MQ=255) ggtaaaaaGGTCGCTTCGGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACcgacg > 1:545789/4‑149 (MQ=255) taaaaaGGTCGCTTCGGCGACCGTTTTACCCGAAATGCTACTTACAGCAGTTCTTTTGCTTTCGCACCAACGGTATCAACAGTGAAGACGCACTCTTCAAACAGCAGCTCTGCCGGAGCAGAGTCCCCGCAGGTGGTCATACCGACGAt > 1:472222/2‑149 (MQ=255) aaaaaaTGTCGACGAAGCGACCTTTTTACCCGAAATGCTAAATACAGCAGTTCTTTTGCTATCGCAACTACGTTATCAACAGTCAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGAt < 1:751313/149‑1 (MQ=255) aaaaaaGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGAt > 2:19350/1‑149 (MQ=255) aaGGTCGCCGAATCGACCTTTTTACCAGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGATGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCa < 2:585696/149‑1 (MQ=255) cGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGtt < 2:905553/149‑1 (MQ=255) ccGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAATCAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCa > 2:813699/1‑149 (MQ=255) cGAAGCGACCTTTTTACCCGAATTGCTAATTACAGCAGTTCTTTTGCTTTCGCAACATCGTTATCAACAGTGAAGCCGAACTCTTCAATCAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAg < 2:706125/149‑1 (MQ=255) | ATAGATATAACAACAAATGTCAATACGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATCAAGGTAATAAAAAAGGTCGCCGAAGCGACCTTTTTACCCGAAATGCTAATTACAGCAGTTCTTTTGCTTTCGCAACAACGTTATCAACAGTGAAGCCGAACTCTTCAAACAGCAGCTCTGCCGGAGCAGATTCACCGAAGGTGGTCATACCGACGATAGCACCGTTCAG > NC_000913/3079469‑3079763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |