| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,708,595 | G→A | 5.6% | intergenic (‑890/+21) | dppA ← / ← proK | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,708,595 | 0 | G | A | 5.6% | 450.5 / 12.3 | 178 | intergenic (‑890/+21) | dppA/proK | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base G (94/72); new base A (5/5); total (100/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.89e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATA > NC_000913/3708447‑3708743 | ttGGGCGGTGATAGACGATTACTCGCCACTTCGTGGCTCGCCCGGCGGGCCGTTGCTTGCGCAACGTTCTCTCGCTTCGCTCGCGTCTAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCCGATGCAAAAAAGCCTGCTCg < 2:116199/149‑1 (MQ=25) tCGGTGATAGCGGAGTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGGTGCTGGCGGATCGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGa < 1:63386/149‑1 (MQ=25) tCGGTGATAGAGGATTACTCGCCACTTGGGGGCACGCCCTGCGGGGCGTTGCGGGCTGAACGTTATCTCGCCTCGGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGa < 1:955762/149‑1 (MQ=18) tGATAGAGGATTACTCGCCACGTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGGTCTCAGACGCATGCGCTGCAGATGCAAAAAAGCCTGCGCGGTGAGccg > 1:373607/1‑147 (MQ=37) taTAGAGGATTAAACGCCACTTGGTGGCTCTCATTGCGGTACGTAGCTGGCGCAACGTTCTCTCGCTTAGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAgg < 2:641013/148‑1 (MQ=18) atatAGGATTACTCGCCAATTCGTGGCTCGACATGCGGGCCGTTGCTTGCGCAACGTTATCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCAACGAGCAGGc < 2:16150/149‑1 (MQ=21) aTAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCAGGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGc > 1:975811/1‑149 (MQ=255) agGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCGCCTCCCTGCCCCCGGCGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCGCGGTGAGCCGGCtttt > 1:175807/1‑149 (MQ=25) gATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCg > 1:723260/1‑149 (MQ=255) ccctACTCGCCACTTCGTGGCTCGCCCAGCGGGCCGTCGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCAACGAGCAGGCtttttt < 1:425438/146‑3 (MQ=21) ttACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGaa > 2:559824/1‑149 (MQ=255) cTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAAttt < 1:62989/149‑1 (MQ=255) cTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCGGCCCCCGGAGGTTCGCAGCCTCATGAGCTGCAGCTGGAAAAAAGCCTGCGCGTTGGGCAGGGGGTTCGAAttt > 1:618090/1‑149 (MQ=255) tCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCACCTCCCTGCCCCCGGAGGTTCTCAGCCGCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCGTTTCGAATTTg > 2:74394/1‑149 (MQ=255) tCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAGGCCTGCTCGGGGAGCAGGCGTTTCGAATTTg > 1:509297/1‑149 (MQ=255) tCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAGCCTCATGAGCTGCCGCTGCAAAAAAGCCTGCTCGTGGCGCAGGCTTTTCGAATTTg > 1:331066/1‑149 (MQ=25) gCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTCATGAGCTGGAGATGCAAAAAAGCCTGCTCGTAGAGCAGGCTTTTCGAATTTGGt > 1:627273/1‑149 (MQ=255) gCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGt > 2:597529/1‑149 (MQ=255) gCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGGTGAGCAGGCTTTTCGAATTTGGt > 2:417261/1‑149 (MQ=255) aCTTCGTGGCTCGCCCTGCGGGCGGTTGCTGGCGCATCGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCgg < 1:9857/149‑1 (MQ=255) ctgcggggCTCGCCCGGCGGGCGGGTGCTGGCGCATCGTTATCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGt < 2:771535/143‑1 (MQ=17) cGTGGCTCGCCCGGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTCATGAGCGGCAGCTGCAAAAAAGCCTGCTCGTTGAGCAGGCGTTTCGAATTTGGTCGGTGAt > 2:730052/1‑149 (MQ=21) tCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATGCGCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCCGGCTTGTCGAATTTGGTCGGTGATAGAGGa > 1:415858/1‑149 (MQ=255) cGCTCTTCGGGGCGTTGCTGTAGTATGGTTCTCTCGCTTCGGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGAt < 2:243551/149‑1 (MQ=14) ttggtGCGGGCCGTTGCTGGCGCATTGTTATCTCGCTTCGGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGAtt < 2:1022862/145‑1 (MQ=17) tttGCGGTCCGGTGGGGGCGCACGGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCg < 2:339996/147‑1 (MQ=14) ccTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATGCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGAttag > 1:516321/1‑147 (MQ=255) ccTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCGCCTCCTCAGGAGCGGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGGATTTGGTCGGTGATAGAGGATTCg > 1:511999/1‑149 (MQ=18) cTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGCACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGGAGATGCAAAAAAGCCTGCTCGTTGAGCAGGGGTTTCGATTTTGGGGGGGGATTGAGGATTGGa > 1:242205/1‑149 (MQ=18) cTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:493723/1‑149 (MQ=255) gCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGATCGAGTCGAACCTCCCGGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAAc < 1:504282/149‑1 (MQ=255) gCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCAGGAGCTGCAGATGCAAAAAAGCCTGCGCGTTGAGCAGGCGTTTCGCATTTGGTCGGGGATAGAGGAGTCGAGCCTcc > 1:693184/1‑149 (MQ=18) gTTGCGGGCGCAACGTTATCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAc < 1:818001/149‑1 (MQ=255) gCTGGCGCAACGTTCTCTCGCTTCGGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAcccc < 1:422211/149‑1 (MQ=255) cTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTGATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACATACGACCCCt > 1:9099/1‑149 (MQ=255) tGGCGCAACGTTCTCTCTCTTCGCTCGAGTCGAACCTCACTTCACCCGGAGGTTCTCATCCTCATGAGCTGCAGATGAAAAAAAGCCTGGTCTTTGAGCGCGCGTTTGGAATTTGGTGGGTGATAGAGGATTAGAACCTCCGACCCCtg > 2:560980/1‑148 (MQ=17) gcgcAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGACCCTCCGACCCCTTCg > 1:742043/1‑149 (MQ=255) cgcAACGTTCTCTCGCTTCGCTCGATTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGt < 1:897820/149‑1 (MQ=255) gaaCGTTCTCTCGCTGCTCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTcc < 1:233813/148‑1 (MQ=255) cAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGt > 2:406181/1‑112 (MQ=255) atcggtatctcGCGTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAACAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTccc < 2:573641/142‑1 (MQ=255) aaCGTTCACACGCTGCGCTCGAGTCGAACCTCCCTGCCCCCGGACGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTccc < 1:685227/149‑1 (MQ=255) ttCTCTCGCTTCGCTCGAGTCGCACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGGTGAGCCGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAGAACCTCCGACCCCTTCGTCCcgaac > 2:429365/1‑149 (MQ=255) ttCTCTCGCTTCGCTCGAGTCGAACCTCCGTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCcgaac < 2:339345/149‑1 (MQ=255) ctctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCCACCTCATGAGCTCCACATGCAAAAAAGCCTGCTCGTTGAGCAGGGTTTTCGAATTTGGTCGGGGATAGAGGATTCGAACCTCCGCCCCCTTCGTCCcgtacga > 2:809382/1‑149 (MQ=18) ctctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCTAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGATTTTGGTCGGTGATAGAGGATTCGCACCTCCGACCCCTTCGTCCcgaacga > 1:835410/1‑149 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCGGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAg < 2:191931/149‑1 (MQ=255) tcgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGGAGATGCAAAAAAGCCTGCGCGATGAGCAGGCGTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTGCGTCCCGAACGAAGt > 1:776856/1‑149 (MQ=18) tcgctgcgctCGTGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTAATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTTATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGt < 2:756536/149‑1 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTg < 1:852337/149‑1 (MQ=255) gcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGATTTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTgc < 2:506153/149‑1 (MQ=255) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTGGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTgcgc > 1:128787/1‑149 (MQ=255) gctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTAc < 2:820994/149‑1 (MQ=255) tgctgtggAACTTCCCTGCCCCCGTAGGTTCTCATCCTCATGAGCTGAAGATGCTAAAACGCCTGCTCGTGGAGCAGGCTTTTCTAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa < 2:710225/142‑1 (MQ=18) tCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTAccc > 1:1009229/1‑148 (MQ=255) tCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCa > 1:962803/1‑149 (MQ=255) ggtgTCGAACATCCCTGCCCCCGGAGTTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCTTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACGAg < 2:178289/146‑1 (MQ=18) gAGTCGAACGTCCCTTCCCCCGTAGGTTCTCATCCTAATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAgg < 2:583086/149‑1 (MQ=255) gAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAgg > 1:305899/1‑149 (MQ=255) gTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTAGTCCCGAACGAAGTGCGCTACCAGGCt > 2:4269/1‑149 (MQ=255) tCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAAAGAAGTGCGCTACCAGGCTg > 2:329440/1‑149 (MQ=255) cTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCaa < 2:723260/149‑1 (MQ=255) cccTGCCCCCGGCGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGCACCTCCGACCCCTTCGTCCCGCACGAAGTGCGCTACCAGGCGGCGCCACTc > 1:175009/1‑149 (MQ=18) cccTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGCCCCCTTCGTCCCGAACGACGTGCGCTACCAGGCTGCGCCAATc > 1:576383/1‑149 (MQ=255) cccTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATc > 2:10494/1‑149 (MQ=255) ccTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGTTGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACATCCGCCCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAAtga > 2:828041/1‑147 (MQ=255) cTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCAc < 1:164365/149‑1 (MQ=255) tGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCAcc < 2:247436/149‑1 (MQ=255) ccccGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGATCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCATCGTCACGAACCAAGTGCGCTACCACGCTGCGCCAATCACCGaa > 1:796807/1‑149 (MQ=21) ccGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATg > 1:1022410/1‑149 (MQ=255) cgggtctcATCCTCATGAGCGGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCggg < 1:645301/145‑1 (MQ=255) aGGTTCTCATCCTCATTAGCTGCAGATGCAAAAAAGCCTGCTCGATCAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCggg < 2:373641/149‑1 (MQ=255) gTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGCACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGgc > 2:211905/1‑149 (MQ=255) gTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGgc > 2:28832/1‑149 (MQ=255) gTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGgc > 1:999931/1‑149 (MQ=255) aTCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGCCCCCTTCGTCCCCAACGAAGAGCGCTACCAGCCTGCGCCAATCACCGAATGCGGGGCGCAACt > 1:1010942/1‑149 (MQ=25) aTCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCt < 1:352462/149‑1 (MQ=255) ccTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTa > 2:922520/1‑149 (MQ=255) cATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTg > 1:878339/1‑149 (MQ=255) aTGAGCTGCAGATGCAAAAAATCCTGCTCGTTGAGCAGGCTTATCGAATTTTGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCACGAACGAAGTGCGCTACCAGGCGGCGCCAATCACCGAATGCGAGGCGCATCTTACTgc > 2:190545/1‑149 (MQ=37) aTGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTgc < 1:206903/149‑1 (MQ=255) aTGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACAGAATGCGGGGCGCATCTTACTgc > 1:797641/1‑149 (MQ=255) cAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATAc > 1:27463/1‑149 (MQ=255) aTGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCAGACCCCTTCGTACCGAACGAAGTGCGCTCCCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGcc > 2:383367/1‑149 (MQ=255) gCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCt > 2:436480/1‑149 (MQ=255) aaaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCg > 1:39626/1‑149 (MQ=255) aaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGCCCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGt > 1:933213/1‑149 (MQ=255) aaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGt < 1:253132/149‑1 (MQ=255) aaacGCCTGCGCGTGGAGCAGGCTTTTCGAATATGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTc < 2:945465/149‑1 (MQ=255) aaaaGCCTGCTCAACGAGCAGACTGTTCGAAGTTGGTCGGTGATAGAGGATTCGAGCCTCCGACCCCTTCGACCCGCACGCAGTGCGCTACCAGGCTGCGCCAATCACCGCATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCggc > 2:215197/1‑147 (MQ=255) aaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCACTCACCGAATGCCGGGCGCCTCGTACTGCGCGGTAACGCCCTCGTCaa > 1:988948/1‑149 (MQ=37) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAGTc < 2:321358/149‑1 (MQ=255) gCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt > 2:603939/1‑64 (MQ=18) gCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:603939/64‑1 (MQ=18) gCCTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:221262/64‑1 (MQ=18) ccTGCTCAACGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATcc > 1:684589/1‑149 (MQ=255) cTGCTCGTTGAGCAGGCTTTTCTAATTTGGTCGGTGATTGAGGATTCGAACCTCCGACCCCATCGTCCCGTACGAAGTGCGCTACCAGGCTGCGCCAAGCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATccc < 2:966234/149‑1 (MQ=39) cGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAAt < 1:417261/149‑1 (MQ=255) cGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAAt < 2:653100/149‑1 (MQ=255) gTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATa < 2:536236/149‑1 (MQ=255) | TTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCGGGCCGTTGCTGGCGCAACGTTCTCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAACGAAGTGCGCTACCAGGCTGCGCCAATCACCGAATGCGGGGCGCATCTTACTGCGCAGATACGCCCTCGTCAATCCCTTAATA > NC_000913/3708447‑3708743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |