| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,309,402 | C→T | 6.4% | W23* (TGG→TAG) | alsC ← | D‑allose ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,309,402 | 0 | C | T | 6.4% | 197.8 / 2.2 | 76 | W23* (TGG→TAG) | alsC | D‑allose ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (33/38); new base T (2/3); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAAAACTCGCCCATGCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATG > NC_000913/4309254‑4309547 | gAAAAACTCGCCCATGCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATccc > 2:840713/1‑149 (MQ=255) aaaaaCTCGCCCATGCCGATCAATACCGTCACGGCGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCa > 1:198410/1‑149 (MQ=255) aaaaaCTCGCCCATGCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCa > 2:431688/1‑149 (MQ=255) aaaaCTCGCCCATGCCGATCTATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAg < 2:513763/149‑1 (MQ=255) cTCGCCCATGCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACTATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACa > 1:728203/1‑149 (MQ=255) gCCCATTCCGATCAATAACGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGTTGGTCAGATAATATTCTTCTGACAGCGAACCAAAGATGGCGACGATGATCGACAGGATAAAAAAGGTGCCGTATTTATCACAGAACAgcc > 2:925580/1‑148 (MQ=255) atcccGATCATTACCGTCACGGAGCTTTGAACAATAATCTGCGTAATTTTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCTCCAGGAAAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCaaa < 2:702241/146‑1 (MQ=255) gCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGt > 1:407599/1‑149 (MQ=255) ccGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGtt < 1:170711/149‑1 (MQ=255) gATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCTAGAACAGCGCAAAGTTGa > 1:339602/1‑149 (MQ=255) gATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCTAGAACAGCGCAAAGTTGa > 1:748627/1‑149 (MQ=255) cacAATACCGTCACGGAGCTTTGAACAAAAATCTGGGCATTATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATATATCCCAGAACAGCGCAAAGTTGaa < 2:187464/147‑1 (MQ=255) tCAATACCGTCACGGATCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTTACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCATAGTTGAAc < 1:233184/149‑1 (MQ=255) aCCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGttt < 1:405624/149‑1 (MQ=255) ccGTCACGGAGCTTTGAACAAAAATCTTGGTAATATTATTGGTGGTCATAAAATAATCTGGTTACAGCGAACCAAAGTTGTCTACGATGATCGCCATGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTttc < 2:146912/149‑1 (MQ=255) cACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTTGGCAGAAAATATTCTGGTGACAGCGAACCAAAGAGGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTtcttct < 1:369492/149‑1 (MQ=255) ggAGCTTTCAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGTACGGTTTCTTctcga > 2:819887/1‑148 (MQ=255) tttGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGCCAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGCACAGCGCAAAGTTGAACGGTTTCTTCTcgctcgct > 2:139705/1‑149 (MQ=255) ttGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCtcgctt > 1:47940/1‑149 (MQ=255) aaCAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCtcgcttcgc > 1:715859/1‑149 (MQ=255) aaCAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGAGCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCtcgcttcgc < 2:551606/149‑1 (MQ=255) aaaaaTCTGTGTAATAATATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACCGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCttt < 1:253627/149‑1 (MQ=255) aaaaaTCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCTCttt < 2:320370/149‑1 (MQ=255) aaaaaTCTGGGTAATAATATTGGTGGTAATAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGATCGGTTTCTTCTCGCGcgcttcgctta < 2:812893/149‑2 (MQ=255) aaaTCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTTTCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCttttt > 1:532028/1‑149 (MQ=255) aaaTCTGGGTAATAATATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCCCGCTCGCTTCGCttttt < 1:540196/149‑1 (MQ=255) aaTCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGGGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTa < 1:590322/149‑1 (MQ=255) cTGGGTACTATTATTGGTGGTCCGAAAATATTCTGGAGACAGGGAACCATAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTATCTTCTCGCGCGCTTCGCTTTTTCctc < 1:260372/149‑1 (MQ=255) gggTAATATTATTGGTGGTCAGAAAATATTCTGGTGCCAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCtt > 2:456122/1‑149 (MQ=255) gggTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCtt < 2:586821/149‑1 (MQ=255) ggTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtg > 1:391421/1‑149 (MQ=255) ggTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGAGGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGACCAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtg > 1:721095/1‑149 (MQ=255) gTACTATTATTGGCGGGCAGAAAATATTCTGCGGACAGCGAACCAAAGATGGCGACGATGATCTCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTGTCTTCTCGCTCGCTTCGCTTTTTACTCTtgt < 2:721095/149‑1 (MQ=255) gTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtgt < 2:391421/149‑1 (MQ=255) tAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCTAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtgtg < 1:213867/149‑1 (MQ=255) tAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtgtg > 1:276641/1‑149 (MQ=255) tAAAATTATAGGTGGTCAGAAAATATTCTGGTGACACCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCTCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTtgtg < 2:358243/149‑1 (MQ=255) gtggtCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCACAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCAt > 1:216159/1‑149 (MQ=255) tggtCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATg > 2:596252/1‑149 (MQ=255) tCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCa > 1:732546/1‑149 (MQ=255) aGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATa > 1:771841/1‑149 (MQ=255) aGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATa > 1:653414/1‑149 (MQ=255) aGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATa > 2:484502/1‑149 (MQ=255) gAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGAGGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTGCTTCTCGCTCGCGTCGCTGTTTACTCTTGTGGTAAAGCCCATGCCATaa > 1:984271/1‑149 (MQ=255) aaaTATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAAtc < 2:47940/149‑1 (MQ=255) tatTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATctcc > 2:491348/1‑149 (MQ=255) atTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATctcct < 2:734898/149‑1 (MQ=255) atTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATctcct > 2:397710/1‑149 (MQ=255) ttCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATctcctc > 1:861498/1‑149 (MQ=255) tGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTc < 2:407599/149‑1 (MQ=255) gAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGGGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCa < 2:3425/149‑1 (MQ=255) cAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATcgc < 2:715859/149‑1 (MQ=255) cAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGAATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCAATAATCTCCTCTTCGCTCATGTCATcgc > 2:265272/1‑149 (MQ=255) aaGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGa < 1:170676/149‑1 (MQ=255) aTGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCTAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTc < 2:339602/149‑1 (MQ=255) aTGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCTAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTc < 2:748627/149‑1 (MQ=255) ggCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGCTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATTTCATCGCGATTCGt > 1:947327/1‑149 (MQ=255) cgacgaTGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCa > 2:862863/1‑149 (MQ=255) cgacgaTGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCa < 1:95015/149‑1 (MQ=255) cgacgaTGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCACAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCa < 2:216159/149‑1 (MQ=255) gatCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTg < 1:941784/149‑1 (MQ=255) gatCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCACATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGAtttt > 1:228122/1‑148 (MQ=255) atCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGc < 2:543143/149‑1 (MQ=255) atCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGc < 1:397710/149‑1 (MQ=255) atCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAAACTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGc > 2:236752/1‑149 (MQ=255) atCGCCAGGATAAAAAAGGTGCCGTATATATCCCAGAACAGCGCAAAGATGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTAGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGc < 1:825969/149‑1 (MQ=255) gCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTc < 2:276641/149‑1 (MQ=255) ggATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTACGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAgtc > 1:521607/1‑149 (MQ=255) aaaaaGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCt < 1:840713/149‑1 (MQ=255) aaaGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTc < 1:444172/149‑1 (MQ=255) ggTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCa < 2:198410/149‑1 (MQ=255) ggTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCa < 1:484502/149‑1 (MQ=255) gCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGaa < 1:377485/149‑1 (MQ=255) tATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATATCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTTCGTCAGTCGTCATTCGCAGAAAACg > 1:899430/1‑149 (MQ=255) aTTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGACCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGAAGAACACgg > 1:526142/1‑149 (MQ=255) aTCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGAt < 2:302233/149‑1 (MQ=255) tCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATg > 2:452739/1‑149 (MQ=255) | GAAAAACTCGCCCATGCCGATCAATACCGTCACGGAGCTTTGAACAAAAATCTGGGTAATATTATTGGTGGTCAGAAAATATTCTGGTGACAGCGAACCAAAGATGGCGACGATGATCGCCAGGATAAAAAAGGTGCCGTATTTATCCCAGAACAGCGCAAAGTTGAACGGTTTCTTCTCGCTCGCTTCGCTTTTTACTCTTGTGGTAAAGCCCATGCCATAATCTCCTCTTCGCTCATGTCATCGCGATTCGTCAGGATTTGCGTCAGTCGTCCTTCGCAGAACACGGCGATG > NC_000913/4309254‑4309547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |