New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 128708481 (0.440)16 (0.100) 11/238 NT 16.8% noncoding (153/171 nt) rttR rtT sRNA, processed from tyrT transcript
?NC_000913 1287557 = 89 (0.560)noncoding (66/85 nt) tyrT tRNA‑Tyr

Only 100 of 133 total aligned reads displayed.

TCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACT  >  NC_000913/1286936‑1287232
                                                                                                                                                    |                                                                                                                                                    
tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTa                                                                                                                                                     <  2:1946636/150‑1 (MQ=255)
  gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACt                                                                                                                                                   <  1:2738383/150‑1 (MQ=255)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTGGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTccac                                                                                                                                                  >  2:3099761‑M1/1‑146 (MQ=255)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                  >  2:1335094/1‑150 (MQ=255)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                  >  2:565340/1‑150 (MQ=255)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTGTGGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                  >  2:366719/1‑150 (MQ=255)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTACTGGGAGTGTAGAGAGTGATCGTGGTGGGGGAAGGATTACTc                                                                                                                                                  >  2:3115643/1‑150 (MQ=17)
    tGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGACGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCa                                                                                                                                                 <  1:1602239/150‑1 (MQ=255)
       cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCATAGTCGAAGCTTCTCAACCATCCCCCCATGGGCCGAAAATTTGATTTCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTaaacacag                                                                                                                                              >  1:2262688/1‑143 (MQ=17)
         gCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCt                                                                                                                                            >  2:552586/1‑150 (MQ=255)
                  ctctctCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTc                                                                                                                                   <  1:2836715/150‑1 (MQ=255)
                  ctctctCGCTGACGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTAGATTGCGGATTCGCCTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTc                                                                                                                                   <  1:2033288/150‑1 (MQ=255)
                  ctctctCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTc                                                                                                                                   >  2:215812/1‑150 (MQ=255)
                  ctctctCGCTGACGCTCGAGCCGAACCGTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTc                                                                                                                                   >  2:215865/1‑150 (MQ=255)
                         gCTGTCGCTCTAGACGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGATTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTc                                                                                                                            <  2:716574/150‑1 (MQ=11)
                            gACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTCATTGCGGATTCGCTGGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTagacccatcgaagtcgatgacggaacaga                                                                                                                         >  2:2321633‑M1/1‑121 (MQ=255)
                               gCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGAGCGCTTCGCCCTTCGGGTCg                                                                                                                      >  2:351206/1‑150 (MQ=255)
                                cTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGt                                                                                                                     >  1:2339413/1‑150 (MQ=255)
                                cTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGt                                                                                                                     >  1:985496/1‑150 (MQ=255)
                                 tccagtcGAACCTGGGTCGAAGCTTCTCCTCCTTCCCCGCTTGGGCAGAATAGTTGATTGCGGATTCGCGTGAGAGTTCAGGGCCTTTTGAAAGTGATGGGGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                                    <  1:1091491/144‑1 (MQ=1)
                                 tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                                    >  1:968967/1‑150 (MQ=255)
                                 tCGAGCCGAACCGTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                                    <  1:1091563/150‑1 (MQ=255)
                                   aagtcGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGc                                                                                                                  >  1:2623403/5‑150 (MQ=9)
                                      tcGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTg                                                                                                               >  1:332040/2‑150 (MQ=18)
                                       cGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCATCGGTTCGtgtccggc                                                                                                              >  2:2620153/1‑143 (MQ=255)
                                        gAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCg                                                                                                             <  1:753801/150‑1 (MQ=255)
                                            cTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTGCGGGTCGTTGCCTGCGGCaa                                                                                                         >  1:3116881/1‑150 (MQ=255)
                                             ttAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaacgtctgagacgatgtcgggaggtgtacattctgctcccaat                                                                                                        >  2:2770971‑M1/1‑104 (MQ=255)
                                             ttAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCACCGCTGCGCGCATCGCCCTTCGGGTCGTGGCCGGAGGCAAc                                                                                                        >  2:535665/1‑150 (MQ=14)
                                             ttAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctcccttt                                                                                                        <  1:684830‑M1/150‑47 (MQ=255)
                                                 tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTACGGGTCGTTGCCTGCGGCAACGctc                                                                                                    >  2:1795850/1‑150 (MQ=255)
                                                   gAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGTAAGCGCTTAGCTCATCACCCTTCGGGTCGTTGCCTGGGGCAAAGttctc                                                                                                  >  2:2722919/1‑150 (MQ=14)
                                                   gAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctctc                                                                                                  <  1:565340/150‑1 (MQ=255)
                                                   gAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGAGGCAACGctctc                                                                                                  >  2:475256/1‑150 (MQ=255)
                                                   gAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTGGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCCCTTCGCCCGTCGGGTCGTGGCCGCCGGCAACGccctc                                                                                                  >  2:2561965/1‑150 (MQ=14)
                                                        ttCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCt                                                                                             <  2:332040/150‑1 (MQ=37)
                                                        gtctcCTCCGTCCCCGCCTGGGCAGAATATTTGCTTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGACAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCGGCGCGCGTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCt                                                                                             <  2:152968/149‑1 (MQ=14)
                                                         tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGATTCCGCCGGCAAAGCACTCTCGCtc                                                                                            >  1:3009775/1‑149 (MQ=14)
                                                         tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCATCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCTg                                                                                            >  1:3008749/1‑150 (MQ=255)
                                                           tcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCGCTCGCGGgc                                                                                          >  2:661951/1‑150 (MQ=255)
                                                              tCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCGCTCGCTGgcgcg                                                                                       >  1:906184/1‑149 (MQ=255)
                                                               ccTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTc                                                                                      <  2:2099636/150‑1 (MQ=255)
                                                                 ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACCCGCACTCGCTGGCGCTCGa                                                                                    >  2:2098143/1‑150 (MQ=255)
                                                                 ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAAGCTCTCTCGCTGGCGCTCGa                                                                                    >  2:1639661/1‑150 (MQ=255)
                                                                 ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCCACCCTCACTCGCGGGCGCTCGa                                                                                    >  1:2420948/1‑150 (MQ=14)
                                                                 ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCAGCGGCAACCCTCACTCGCTGGCGCTCGa                                                                                    >  2:1459179/1‑150 (MQ=255)
                                                                   ccccGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAGTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGt                                                                                  <  2:2953414/150‑1 (MQ=12)
                                                                     ccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGACGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCACTCGCAGGCGCACGAGTCg                                                                                >  2:424194/1‑150 (MQ=14)
                                                                     ccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCg                                                                                >  2:2525981/1‑150 (MQ=255)
                                                                     ccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCACGAGGCg                                                                                >  2:2172272/1‑150 (MQ=255)
                                                                             gCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTgg                                                                        <  1:1335094/150‑1 (MQ=255)
                                                                                           tGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctg                                                          >  1:2986485‑M1/1‑58 (MQ=255)
                                                                                                    gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCAACCTTCCCCg                                                 >  2:784537/1‑150 (MQ=255)
                                                                                                     cTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGATCTCTCGCTGTCGCTCGAATCGAACCTTACTCGAAGGTTCTCAACCATCCCCGc                                                >  2:2486753/1‑150 (MQ=11)
                                                                                                      tgggaagttcagGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcg                                               <  2:2986485‑M1/145‑104 (MQ=255)
                                                                                                          gagTTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATggg                                           <  1:1035674/150‑1 (MQ=21)
                                                                                                          gaattCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATggg                                           <  1:488080/147‑1 (MQ=0)
                                                                                                               cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCACGCTGGCGCACGAGTCGAACCATGGTAGAAGCTTCACATACTTCCCCGCAGGGGCAGaa                                      >  2:957392/1‑150 (MQ=14)
                                                                                                               cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCATCGCCCTTCGGGTCGATGCCAGCGGCAACGCTCTCTCGCTGCCGCACGACGCGAACCGTCCTCGAAGCTTCTCATCCTTCCCCCCCTGGGCACaa                                      >  2:2750151/1‑150 (MQ=11)
                                                                                                                aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCAAGCTGGCCCACGAGTCGAACCTTGGTAGAAGCATCAAAAACATACCCCCAAGGGCAGaaa                                     >  1:1928127/1‑149 (MQ=14)
                                                                                                                   gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCGCGAGTCGAACCTTGGTCGAAGCTTCTCAACCTTCCCCGCAAGGGCCGAAAAtt                                  >  2:2402363/1‑150 (MQ=11)
                                                                                                                   gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGACGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGACTCGAACCTTCGTCGAAGCTTCTCAACCTTCCCCGAATAGTCAAAAAAtt                                  >  2:2065120/1‑150 (MQ=11)
                                                                                                                    aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgca                                 >  2:409371‑M1/1‑33 (MQ=255)
                                                                                                                    aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgca                                 >  2:2832763‑M1/1‑33 (MQ=255)
                                                                                                                    aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgcattttactggcctgctaccttatcgggaagcggggcgca                                 >  2:2832778‑M1/1‑33 (MQ=255)
                                                                                                                    aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgcaccctttggccgctcgggaaccccaccacggggtaatgctatttacaggcctgctcccttatcgtgaagcggggcgca                                 >  2:2832833‑M1/1‑33 (MQ=255)
                                                                                                                        ttGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgcttt                                                                     <  1:1999510‑M1/110‑82 (MQ=255)
                                                                                                                        ttGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgcttt                                                                     >  2:1999510‑M1/1‑29 (MQ=255)
                                                                                                                           aaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTTGCGCTCGAATCGAACCTTGGACCAAGCTTCTCATACTTCAACTAAAGGGAAGAAAAATTAATTgag                          >  2:2014436/1‑148 (MQ=11)
                                                                                                                           aaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCACGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCg                          >  2:506031/1‑150 (MQ=255)
                                                                                                                                 aTGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCATCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCTGGCGCTCGAGACGAACCTTTGTCGAATCTTCTCATCCATCACCCCAAGGGCAGAATATTTTATTGCGGATTCg                    >  2:2673089/1‑150 (MQ=11)
                                                                                                                                  tggtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgac                   <  2:992351‑M1/150‑132 (MQ=255)
                                                                                                                                   ggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGtt                  <  1:1129414/150‑1 (MQ=37)
                                                                                                                                   ggatctggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGtt                  <  1:1387894/145‑1 (MQ=255)
                                                                                                                                    gtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgc                 <  1:1887842‑M1/150‑134 (MQ=255)
                                                                                                                                     tggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTgg                <  1:366719/150‑1 (MQ=38)
                                                                                                                                     gggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCTACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGTTgg                <  1:3115643/149‑1 (MQ=255)
                                                                                                                                      ggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgc               <  2:694000‑M1/150‑136 (MQ=255)
                                                                                                                                      ggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgc               >  2:2499278‑M1/1‑15 (MQ=255)
                                                                                                                                      ggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCCGAATATTTAATTGCGGATTCGTTggg               >  2:2796100/1‑150 (MQ=255)
                                                                                                                                      ggtggGGGAAGGATTAATCAGCGCTTCGCGCTTCGCCATTCGGGTCGTTGCCAGCGGCAACGCTCACTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGTATATTTAATTGCGGATTCGTTggg               >  2:2796052/1‑150 (MQ=14)
                                                                                                                                        tggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg             >  2:2983561‑M1/1‑13 (MQ=255)
                                                                                                                                        tggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg             >  2:2594076‑M1/1‑13 (MQ=255)
                                                                                                                                        tggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg             >  2:242933‑M1/1‑13 (MQ=255)
                                                                                                                                        tggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg             >  2:394165‑M1/1‑13 (MQ=255)
                                                                                                                                         gggggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCTCACGCAGGCGCGCGAGTCGAACCGTGGTCGAAGCATCTCAAACTTACCCCCAAGGGCAGAATAATTAATTGCGGATTCGTTGGGAAg            >  2:892273/1‑150 (MQ=14)
                                                                                                                                          ggggAAGGATTcgaaccttcgaagtcgatgacggctgatttacagtctgctccctttggccgcgcgggaaccccaccacggggtcatgctttttactggcctgctcccgtatcgggaagcggggcgcctcctatcaaaggacgcgccgct           >  2:2250915‑M1/1‑11 (MQ=255)
                                                                                                                                          ggggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgct           >  2:2250907‑M1/1‑11 (MQ=255)
                                                                                                                                               aGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaa      >  2:2423749‑M1/1‑6 (MQ=255)
                                                                                                                                               aGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaa      >  2:2889532‑M1/1‑6 (MQ=255)
                                                                                                                                               aGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTAGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAgg      <  2:968967/150‑1 (MQ=255)
                                                                                                                                               aGGATGACGCAGCGCGGCGCGCTTCGCCCGGCGGGTCGGTGCCTGCGGCAACGCTCTCTCGCGGGCGCTCGAGTCGAACCTGGGTCGAAGCTTCTCATCCGTCCCCGCCTGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAgg      <  2:8986/150‑1 (MQ=14)
                                                                                                                                                ggATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaag     <  2:1668726‑M1/150‑146 (MQ=255)
                                                                                                                                                 gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggttatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagt    <  1:2832778‑M1/150‑147 (MQ=255)
                                                                                                                                                 gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagt    <  1:409371‑M1/150‑147 (MQ=255)
                                                                                                                                                 gATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagt    <  1:2832833‑M1/150‑147 (MQ=255)
                                                                                                                                                  aTTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCCGGGGCCGGATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGAc   >  2:2683753/1‑150 (MQ=255)
                                                                                                                                                   ttcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgt  >  2:2671898‑M1/1‑2 (MQ=255)
                                                                                                                                                   ttcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgt  >  2:2888932‑M1/1‑2 (MQ=255)
                                                                                                                                                   ttcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctccctgatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtacagtgt  >  2:2671889‑M1/1‑2 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACT  >  NC_000913/1286936‑1287232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.