Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,470,436 C→A 16.0% Q436K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4360CA16.0% 482.0 / 21.1 173Q436K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (51/86);  new base A (32/3);  total (84/89)
Fisher's exact test for biased strand distribution p-value = 5.11e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 174 total aligned reads displayed.

CTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTC  >  NC_000913/2470289‑2470583
                                                                                                                                                    |                                                                                                                                                   
ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCaa                                                                                                                                                   <  1:551661/150‑1 (MQ=255)
ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCaa                                                                                                                                                   <  1:551670/150‑1 (MQ=255)
ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCaa                                                                                                                                                   <  1:586660/150‑1 (MQ=255)
  ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                 <  1:2316810/150‑1 (MQ=255)
  ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                 <  2:2824589/150‑1 (MQ=255)
  ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                 <  1:549369/150‑1 (MQ=255)
  ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCATTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                 <  2:1208066/150‑1 (MQ=255)
      ggAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAt                                                                                                                                             <  1:1436726/150‑1 (MQ=255)
      ggAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAt                                                                                                                                             <  1:586824/150‑1 (MQ=255)
         atatCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTTTAAAATAATTAAAATAAATCAAGaaaaaatc                                                                                                                                          >  1:1570142/1‑146 (MQ=255)
         atatCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAATAAAACAAGACaaaatc                                                                                                                                          >  2:2726736/1‑146 (MQ=255)
         atatCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGc                                                                                                                                          <  2:1418463/150‑1 (MQ=255)
           atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGa                                                                                                                                        <  1:2110201/150‑1 (MQ=255)
            tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAt                                                                                                                                       <  1:1090941/150‑1 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAATGATTTAGAGATTTAAGCAAGGATTTATTTGGAATGTATTTTTCTTTCGTCCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATTATTCAAAGAAATCAAGACAATAGCGATGt                                                                                                                                     <  1:1821183/150‑1 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGt                                                                                                                                     <  1:244213/150‑1 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAAAAAAAATCGATGt                                                                                                                                     >  2:36597/1‑150 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTAAAATAAATaaataaaatatagttgt                                                                                                                                     >  2:1622579/1‑143 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTAAAATAAATCAAGACAATATCGAAGt                                                                                                                                     >  1:1605973/1‑150 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTAAAAGAAATAAAGACAAAATAGATGt                                                                                                                                     >  1:2500036/1‑150 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAAATAAAAGAAAACAAAACAAAATCGATGt                                                                                                                                     >  2:145967/1‑150 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAAATAAAAAAAAACAAAAAAAAAGCGaatt                                                                                                                                     >  1:2659234/1‑147 (MQ=255)
              tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TGTTTTTAAATTATAAAAAAAATCAAATAAAAAAAGAAAAAATCGATGt                                                                                                                                     >  1:1311744/1‑150 (MQ=255)
               cAATTTAATGTGTCATTTTTAGTGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGTCCTTTGCTTATACATAAAAGTCG‑TGTTTTTAATTTATAAAAAAATACAAAGAAATCAAGACAATATCGATGTa                                                                                                                                    >  2:1487507/1‑150 (MQ=255)
                aaTTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAATCGAAGTaa                                                                                                                                   >  2:446142/1‑150 (MQ=255)
                  ttttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATTAAATAATTAAAATAAATAAATACAAAAGCGATGTAAAg                                                                                                                                 >  1:1516235/1‑150 (MQ=255)
                  ttttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAg                                                                                                                                 <  2:2437821/150‑1 (MQ=255)
                    ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTAAAATAAATCAAAAAAAAAGCGATTTAAATCa                                                                                                                               >  2:841743/1‑150 (MQ=255)
                    ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAAAAAATAAAAGAAATAAAGACAATAGCGATGTAAAGCa                                                                                                                               >  1:193510/1‑150 (MQ=255)
                      aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAATAAATAAAGACAATATAGATTTAAAGCACt                                                                                                                             >  2:3010772/1‑150 (MQ=255)
                        gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTaa                                                                                                                           <  2:2630820/150‑1 (MQ=255)
                         tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAg                                                                                                                          >  2:760433/1‑150 (MQ=255)
                         tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAAACAAGACAAAAACGATGTAAATCACAAAg                                                                                                                          >  1:2442215/1‑150 (MQ=255)
                           tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTAAAATAAAAAAAGAAAAAAGCGATTTAAAGAACAAAAtt                                                                                                                        >  1:1367023/1‑150 (MQ=255)
                           tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTAAAAAATAATTCAAAGAAATCAACACAAAAGCGATGTAAAGCACTAAGtg                                                                                                                        >  2:2240966/1‑149 (MQ=255)
                             aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTa                                                                                                                      <  2:1369743/150‑1 (MQ=255)
                               ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                                    <  1:2754918/150‑1 (MQ=255)
                               ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                                    <  1:1117310/150‑1 (MQ=255)
                                tttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAAt                                                                                                                   >  2:2556149/1‑150 (MQ=255)
                                      ggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgct                                                                                                             <  1:1286672/150‑2 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                    <  1:938964/150‑1 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                    <  2:1005396/150‑1 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                    <  1:1155960/150‑1 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                    <  1:3099402/150‑1 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                                    <  2:1905639/150‑1 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TGTTTTTAATTTATAAAATAATTAAAAGAAAACAAAACAAAATCGGTGTAAATCACAAAGTTTAAATTTAGCGCCCATCATg                                                                                                    >  1:2678483/1‑150 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TGTTTTTAAATTATAAAAAAAATAAAAAAAATAAAGAAAAAAGCGCATTAAAACACAAAGTTTAAATTTAGCGCCAAACagg                                                                                                    >  1:982010/1‑148 (MQ=255)
                                                agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAAAAATTAAAAAAAAAAAAAACAAAATAGATGTAAAGCCCTAATTTTTAATTTCGCGCCAAtactgg                                                                                                   >  1:2199228/1‑145 (MQ=255)
                                                 gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAAATCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgc                                                                                                  >  2:1283737/1‑150 (MQ=255)
                                                    aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTTATTTATTAAATTATTGAAATTAATGAATACAATTTCGTTGTAAAGGACTAAGTTTTAATTTCGGGCCAATCAttggggg                                                                                               >  2:1314648/1‑144 (MQ=255)
                                                         agcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACaa                                                                                          <  2:766842/150‑1 (MQ=255)
                                                         agcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAAAAAAGACAATAGCGATTTAAAGCACAAAGTTTAAATTGCGCGCCAAACATGGAGCGCACaa                                                                                          >  2:2259988/1‑150 (MQ=255)
                                                          gcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TGTTTTTAAATTATAAAATAATTAAAACAAAAAAAAAAAAAAACGAAGTAAAAAAACAAGTTTTAATTTATCGCCAAACAAGGCGCGcaaccc                                                                                         >  1:299993/1‑146 (MQ=255)
                                                            aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATTAAATAAATTAAAAAAAAAAATACAAAAGCGAAGTAAAACAAAAAGTTTAAATTTAGCGCCCAACAGGGCGCGCCCAAGcg                                                                                       >  1:1208402/1‑149 (MQ=255)
                                                            aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCATGATTGGCGCGcaatttaa                                                                                       <  1:2060281/150‑7 (MQ=255)
                                                            aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TGTTTTTTATTTATAAAAAAAATAAAATAAAACAAGAAAAAACAGATGTAAATCACAAATTTTAAATTTCGCGCCCCACATGGCGCGcaccaacc                                                                                       >  1:1475019/1‑145 (MQ=255)
                                                             agcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAAAAATTCAAATAAAAAAAGACAATAGCGATGTAAAGCACAAAGGTTAAAATGCGCGCCAAACATGGCGCGCACAAGCta                                                                                      >  2:2703136/1‑150 (MQ=255)
                                                                  ttatttGTATTTTATTTTTCGTTGGAACTTTGTTTATAAATAACTGTTT‑TTTTTTTAATTTATAAAATAATTAAAATAAATAAATAAAATAGCTTTGTAAAGAACTATTTTTAATTGGCGCGCAACTCAGGGCGCGCACAAGCTataata                                                                                 <  1:145967/150‑1 (MQ=255)
                                                                         tattttttttttGTTTCTACTTTTGATTATACATAACAGTCT‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCTATGTAAAGCAATATGTTTAATTTGCGCGCAAATCTTGGCGCGCACAAGCTATAATACCAACCt                                                                          <  1:2591499/143‑1 (MQ=255)
                                                                         gAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCt                                                                          <  2:1645196/150‑1 (MQ=255)
                                                                              tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAAAAGCGATGTAAAGCAATAATTTTAAATTGCGCGCCAATCAAGGCGCGCCCCAGCTATAAAACCAACCAAAatt                                                                     >  2:2417881/1‑150 (MQ=255)
                                                                                tttttCTTTAGACCTTTTATTATAAATAACATTTG‑TTTTTTTATTTTATAAAATAATTCAAATAAATCAAGACAATAGCTATTTAAAGAACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                                   <  1:1163424/150‑1 (MQ=255)
                                                                                        tcgACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCACCCTAATTTCTCCTCctct                                                           <  2:2197877/150‑1 (MQ=255)
                                                                                        tcgACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGAAGTAAAGCACTAAGGTTAAAATGCGCGCCAAACATGGCGCGCACAAGCGAAAAAACCAACCTAAAATcacctccacg                                                           >  2:2276948/1‑147 (MQ=255)
                                                                                         cgACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTATCCACCTCtt                                                          >  2:3094335/1‑150 (MQ=255)
                                                                                          gACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAAAAATTCAAAGAAAACAACACAAAAACGAAGTAAAGCACGAAGTTTAAATTTCGCGCCAAACATGGCGCGCACAACCAATAATACCAACCAAATTTctactccgccta                                                         >  2:2751799/1‑145 (MQ=255)
                                                                                            ccTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                       <  2:688974/150‑1 (MQ=255)
                                                                                            ccTTTGATTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                       <  1:292169/150‑1 (MQ=255)
                                                                                              tttGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                                     <  1:1822085/150‑1 (MQ=255)
                                                                                              tttGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                                     <  1:400282/150‑1 (MQ=255)
                                                                                                 gCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                                  <  2:2176234/150‑1 (MQ=255)
                                                                                                     ataCATAACAGTCGTTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATAGCGATGTAAAGCACTAATTTTAAATTTCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACtat                                               >  2:2047979/1‑150 (MQ=255)
                                                                                                          tAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                         <  2:1194226/150‑1 (MQ=255)
                                                                                                          tAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                         <  2:1194239/150‑1 (MQ=255)
                                                                                                               gTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTACAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCTCAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                    <  2:2595939/150‑1 (MQ=255)
                                                                                                               gTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                    <  2:2018722/150‑1 (MQ=255)
                                                                                                                  g‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGaa                                 <  2:1311744/150‑1 (MQ=255)
                                                                                                                       ttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                             <  1:1726302/150‑1 (MQ=255)
                                                                                                                       ttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAACCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                             <  2:299067/150‑1 (MQ=255)
                                                                                                                        tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                            >  2:110992/1‑150 (MQ=255)
                                                                                                                        tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                            <  1:713653/150‑1 (MQ=255)
                                                                                                                        tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                            <  1:2976801/150‑1 (MQ=255)
                                                                                                                         ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                           >  1:636206/1‑150 (MQ=255)
                                                                                                                         ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                           >  1:1844660/1‑150 (MQ=255)
                                                                                                                            aTTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt                        >  1:3032554/1‑150 (MQ=255)
                                                                                                                             tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                       <  1:648124/150‑1 (MQ=255)
                                                                                                                             tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                       <  1:222559/150‑1 (MQ=255)
                                                                                                                                  aaaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa                  <  1:1064390/150‑1 (MQ=255)
                                                                                                                                    aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGTGTGACTAAATCTCCTGATAGAATTGCGGGATTGACTATc                >  2:650212/1‑150 (MQ=255)
                                                                                                                                    aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc                <  2:959675/150‑1 (MQ=255)
                                                                                                                                    aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc                <  2:1951486/150‑1 (MQ=255)
                                                                                                                                    aataatTCAAAGAAATCAACACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCACTCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc                <  1:1999758/150‑1 (MQ=255)
                                                                                                                                           cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc         <  1:2164894/150‑1 (MQ=255)
                                                                                                                                           cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc         <  1:2814184/150‑1 (MQ=255)
                                                                                                                                            aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc        >  1:1518597/1‑150 (MQ=255)
                                                                                                                                                aaaTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGTATTGCGGTATTGACTATCAAATGCCCTGAt    >  1:1199916/1‑150 (MQ=255)
                                                                                                                                                  aTCAAGACAATAGCGATGTAATGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATACTACCAACCTAATTTCTCCTCCTGTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGAGTc  >  2:579665/1‑150 (MQ=255)
                                                                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGACTTGCGGTATTGACTATCAAATGCCCTGATTc  >  2:579663/1‑150 (MQ=255)
                                                                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTc  >  1:1659039/1‑150 (MQ=255)
                                                                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTc  >  1:2869277/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCG‑TTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTC  >  NC_000913/2470289‑2470583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑