New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	16 (0.020)	11/278	NT	5.4%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 3470951	280 (0.390)					coding (379/1185 nt)	tufA	translation elongation factor EF‑Tu 1

AATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAA  >  NC_000913/1978499‑1978648     |                                                                                                                                                  gccgggTAATGACTCCAACTTATTGTGAGTGTTTTATGTTCAGATAATGCCCGATGTGTTTGTCATGCAGCTCCGCCGATGTTGTGACCGACAGCGACTGCCGTCCCAGCCGTGCCAGGTGCTGCCGCCGATTCCGGTTATGCCGCGCag  >  2:7690672/4‑149 (MQ=11)     |                                                                                                                                                  AATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAA  >  NC_000913/1978499‑1978648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.