New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2538614NA (NA)6 (0.010) 4/264 NT NA noncoding (80/98 nt) RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3740971 = NA (NA)noncoding (8/98 nt) RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 787 total aligned reads displayed.

GTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCA  >  NC_000913/2538465‑2538763
                                                                                                                                                     |                                                                                                                                                     
    ccTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGc                                                                                                                                                   <  1:3429780/150‑1 (MQ=255)
       cACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTa                                                                                                                                                <  1:1586432/150‑1 (MQ=255)
        aCGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAg                                                                                                                                               >  1:1806792/1‑150 (MQ=255)
         cGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAgc                                                                                                                                              >  2:46562/1‑150 (MQ=255)
          gAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAgcg                                                                                                                                             <  1:3788762/150‑1 (MQ=255)
                 aaaTACTGCATGTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                                      >  2:4022332/1‑150 (MQ=255)
                  aaTACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATgcgctacgcttatcaggc                                                                                                                                     <  1:2952060‑M1/150‑19 (MQ=255)
                    tACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAg                                                                                                                                   >  2:2598216/1‑150 (MQ=255)
                    gaCTGCATTTGTCGGCAGCCACAACTGTTAAAAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAg                                                                                                                                   <  1:2539711/149‑1 (MQ=255)
                       tGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGttt                                                                                                                                >  1:532184/1‑150 (MQ=255)
                       tGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTGGTAGGCCTGATAAGCGTAGCGCATCAGGCAGttt                                                                                                                                >  1:11135328/1‑150 (MQ=255)
                        gCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACCAAATCGTGCTAATTCAATATATGGCAGACACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt                                                                                                                               <  2:212401/150‑1 (MQ=255)
                        gCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt                                                                                                                               <  2:5288653/150‑1 (MQ=255)
                          aTTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGc                                                                                                                             <  2:9821801/150‑1 (MQ=255)
                            ttGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGt                                                                                                                           <  1:3523491/150‑1 (MQ=255)
                            ttGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGt                                                                                                                           <  1:4561607/150‑1 (MQ=255)
                              gTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGttt                                                                                                                         <  1:9677481/150‑1 (MQ=255)
                              gTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTGGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGttt                                                                                                                         <  2:3165186/150‑1 (MQ=255)
                               tCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTg                                                                                                                        >  1:6254341/1‑150 (MQ=255)
                               tCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTg                                                                                                                        >  2:1120738/1‑150 (MQ=255)
                                cGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGt                                                                                                                       >  2:4310503/1‑150 (MQ=255)
                                     gcaACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatca                                                                                                                  <  1:4296121/150‑1 (MQ=255)
                                        acaacTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGtc                                                                                                               >  1:2415560/1‑150 (MQ=255)
                                          aacTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGtctc                                                                                                             >  2:9227249/1‑150 (MQ=255)
                                          aacTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGtctc                                                                                                             >  1:8349317/1‑150 (MQ=255)
                                             tGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGa                                                                                                          <  1:7489072/150‑1 (MQ=255)
                                              gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTCGCGCATCAGGCAGTTTTGCGTGTGTCATCAGTCTCCGAt                                                                                                         >  1:8109581/1‑150 (MQ=255)
                                               ttAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATg                                                                                                        <  2:11419998/150‑1 (MQ=255)
                                                tAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGc                                                                                                       >  1:2136394/1‑150 (MQ=255)
                                                 aaaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCt                                                                                                      <  1:8183331/150‑1 (MQ=255)
                                                 aaaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCt                                                                                                      <  1:11443009/150‑1 (MQ=255)
                                                  aaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTa                                                                                                     <  2:1581211/150‑1 (MQ=255)
                                                   aaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTAt                                                                                                    >  2:10246234/1‑150 (MQ=255)
                                                           gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATGTTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCtt                                                                                            >  1:7836604/1‑150 (MQ=255)
                                                             tttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                                                                          >  2:1094400/1‑150 (MQ=255)
                                                             tttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                                                                          <  1:696457/150‑1 (MQ=255)
                                                             tttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                                                                          >  1:9309718/1‑150 (MQ=255)
                                                             tttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                                                                          >  2:1368134/1‑150 (MQ=255)
                                                                gTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATc                                                                                       >  1:12239770/1‑150 (MQ=255)
                                                                 tgtATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATcc                                                                                      <  2:8787644/148‑1 (MQ=255)
                                                                  ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATccc                                                                                     >  2:5008010/1‑150 (MQ=255)
                                                                     tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGc                                                                                  >  1:5729603/1‑150 (MQ=255)
                                                                       ccGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGccc                                                                                >  1:6733436/1‑150 (MQ=255)
                                                                        cGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcccc                                                                               >  1:10575582/1‑150 (MQ=255)
                                                                         ggATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGccccc                                                                              <  1:9510742/150‑1 (MQ=255)
                                                                          gATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCt                                                                             <  2:7872869/150‑1 (MQ=255)
                                                                           aTGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTg                                                                            <  1:11013552/150‑1 (MQ=255)
                                                                            tGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTgg                                                                           >  2:5420542/1‑150 (MQ=255)
                                                                             gcggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGc                                                                          <  2:7289075/150‑1 (MQ=255)
                                                                              cggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCt                                                                         <  2:6812226/150‑1 (MQ=255)
                                                                               ggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTa                                                                        >  2:8329241/1‑150 (MQ=255)
                                                                               ggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTa                                                                        <  2:10758317/150‑1 (MQ=255)
                                                                                  gTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTaaaa                                                                     >  2:7525960/1‑150 (MQ=255)
                                                                                      aCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGct                                                                 >  2:9493495/1‑150 (MQ=255)
                                                                                       cGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGctc                                                                <  2:10575582/150‑1 (MQ=255)
                                                                                         ccTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCtt                                                              >  1:11832884/1‑150 (MQ=255)
                                                                                          cTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTc                                                             <  1:8868814/150‑1 (MQ=255)
                                                                                           ttATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGGGTGTCATCAGTCTCCGATGCTCTTAATCCTTAAATCCCCGCCCCCTGGCTAAAAGGCTCTTcc                                                            >  2:12203231/1‑150 (MQ=255)
                                                                                             aTCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTcccc                                                          <  1:10809187/150‑1 (MQ=255)
                                                                                              tCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCa                                                         >  1:5612268/1‑150 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                       <  2:6321114/150‑1 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                       <  1:6646198/150‑1 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                       >  1:9997323/1‑150 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                       >  2:4876646/1‑150 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaaa                                                       <  2:3923723/150‑1 (MQ=255)
                                                                                                cGGCCTACAAAATCGTGCTAATTCAATATAGGGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAACTCCCCGCCCCCTGGCTAAAATGCTCTTCCCCaac                                                       <  1:7289344/150‑2 (MQ=255)
                                                                                                     tACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAccc                                                  <  1:4870368/150‑1 (MQ=255)
                                                                                                          aaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTTGCTAAAATGCTCTTCCCCAAACACCCCGGTa                                             <  1:3900251/150‑1 (MQ=255)
                                                                                                               tGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAg                                        <  1:12060559/150‑1 (MQ=255)
                                                                                                                  tAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTa                                     <  2:2188939/150‑1 (MQ=255)
                                                                                                                    aTTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGctc                                                                <  1:8734283/121‑1 (MQ=255)
                                                                                                                    aTTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGc                                   <  2:8160550/150‑1 (MQ=255)
                                                                                                                    aTTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGAGTAGCGCATCAGGCAGATTTGCGTTTGTCATCAGTCTCAGATGCTATTAATCATTAAATCCCCCCCCCCTGGCTAAAAAGCTCTTCCCCAAACACACCCGTAGAAAGATatc                                   >  1:10001585/1‑148 (MQ=25)
                                                                                                                     ttCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCg                                  >  1:10413520/1‑150 (MQ=255)
                                                                                                                       cAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGAt                                >  1:6776607/1‑150 (MQ=255)
                                                                                                                       cAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGAt                                >  2:7755661/1‑150 (MQ=255)
                                                                                                                        aaTATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATc                               <  2:1910028/150‑1 (MQ=255)
                                                                                                                        aaTATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATc                               <  2:6999732/150‑1 (MQ=255)
                                                                                                                              ttGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACg                         >  2:846382/1‑150 (MQ=255)
                                                                                                                              ttGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACg                         >  2:10399816/1‑150 (MQ=255)
                                                                                                                                 cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATc                      <  2:3544374/150‑1 (MQ=255)
                                                                                                                                 cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATc                      <  2:6723335/150‑1 (MQ=255)
                                                                                                                                  aGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGGAGAAAGGTAGCGATCGCCACGATCg                     >  2:5602821/1‑150 (MQ=255)
                                                                                                                                    aaaCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGTGGCGATCGct                   <  1:10216250/150‑2 (MQ=255)
                                                                                                                                    aaaCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCa                   <  1:7652801/150‑1 (MQ=255)
                                                                                                                                       ccTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGTGGCGATCGctacc                <  1:1977147/150‑5 (MQ=255)
                                                                                                                                               gCCTGATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaa        >  2:805693‑M1/1‑7 (MQ=255)
                                                                                                                                               gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCCCGATCGCAGATGATCGcca        >  2:11677335/1‑150 (MQ=255)
                                                                                                                                               gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGcca        >  2:11999008/1‑150 (MQ=255)
                                                                                                                                                  tGATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacag     >  1:9160727‑M1/1‑4 (MQ=255)
                                                                                                                                                  tGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGccacca     <  1:5142011/150‑1 (MQ=255)
                                                                                                                                                   taTAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGccaccac    >  2:8697219/2‑150 (MQ=255)
                                                                                                                                                   gATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacagg    >  2:3007569‑M1/1‑3 (MQ=255)
                                                                                                                                                   gATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacagg    >  1:2266377‑M1/1‑3 (MQ=255)
                                                                                                                                                    aTAAGCGTAGCGCATCAGGCAGTTTTGCTTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATAGCCACGATCGCAGATGATCTccaccacc   >  1:3126365/1‑150 (MQ=255)
                                                                                                                                                     tgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacaggct  >  1:5939205‑M1/1‑1 (MQ=255)
                                                                                                                                                     tgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacaggct  >  2:6055296‑M1/1‑1 (MQ=255)
                                                                                                                                                     tgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacaggct  >  1:4116390‑M1/1‑1 (MQ=255)
                                                                                                                                                     tgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacaggct  >  2:897114‑M1/1‑1 (MQ=255)
                                                                                                                                                     tAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATAGCAGATGATCGccaccacca  >  1:11328444/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACCCCGGTAGAAAGGTAGCGATCGCCACGATCGCAGATGATCGCCACCACCA  >  NC_000913/2538465‑2538763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.