BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2654970 =	NA (NA)	9 (0.010)	7/264	NT	NA	noncoding (1/97 nt)	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	2654995 =	NA (NA)	9 (0.010)	7/264	NT	NA	noncoding (26/97 nt)	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 694 total aligned reads displayed.

CAGGCACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGT  >  NC_000913/2654822‑2655119

ttgaacagtggtctgcgggcgctacgggacttggtgtgcgcacgatagctaatctgttaacggcgtaaactaatatgccggatgcggcgtaaacgccttatccggcctacaaattctgcaaattcaacaaattgcgaatcccttgtagGc                                                                                                                                                      >  2:7697433‑M1/149‑150 (MQ=255)

 tgaacagtggtctgcgggcgctacgggacttggtgtgcgcacgatagctaatctgttaacggcgtaaactaatatgccggatgcggcgtaaacgccttatccggcctacaaattctgcaaattcaacaaattgcgaatcccttgtagGcc                                                                                                                                                     >  1:1507230‑M1/148‑150 (MQ=255)

 aGGCACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGcc                                                                                                                                                     <  1:9595969/150‑1 (MQ=255)

 aGGCACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGcc                                                                                                                                                     >  1:35019/1‑150 (MQ=255)

 aGGCACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGcc                                                                                                                                                     >  2:11594111/1‑150 (MQ=255)

    cACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGa                                                                                                                                                  <  1:6604454/150‑1 (MQ=255)

    acagtggtctgcgggcgctacgggacttggtgtgcgcacgatagctaatctgttaacggcgtaaactaatatgccggatgcggcgtaaacgccttatccggcctacaaattctgcaaattcaacaaattgcgaatcccttgtagGCCTGa                                                                                                                                                  >  1:11001259‑M1/145‑150 (MQ=255)

        cAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATgcg                                                                                                                                              <  2:494181/150‑1 (MQ=255)

        cAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATgcg                                                                                                                                              <  1:9959396/150‑1 (MQ=255)

         aGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATgcgc                                                                                                                                             <  1:42081/150‑1 (MQ=255)

         aGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATgcgc                                                                                                                                             <  2:8429552/150‑1 (MQ=255)

                    tCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCa                                                                                                                                  >  1:3106337/1‑150 (MQ=255)

                     ctacgggacttggtgtgcgcacgatagctaatctgttaacggcgtaaactaatatgccggatgcggcgtaaacgccttatccggcctacaaattctgcaaattcaacaaattgcgaatcccttgtagGCCTGATGCGCTACGCTTATCAg                                                                                                                                 >  1:11939498‑M1/128‑150 (MQ=255)

                     ccAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAg                                                                                                                                 >  1:740358/1‑150 (MQ=255)

                      cAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAgg                                                                                                                                >  1:11185836/1‑150 (MQ=255)

                       acgggacttggtgtgcgcacgatagctaatctgttaacggcgtaaactaatatgccggatgcggcgtaaacgccttatccggcctacaaattctgcaaattcaacaaattgcgaatcccttgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               >  2:240154‑M1/126‑150 (MQ=255)

                       aGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  2:8160372/150‑1 (MQ=255)

                       aGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  1:4839738/150‑1 (MQ=255)

                         gagagTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTATTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCt                                                                                                                             <  2:1817841/149‑1 (MQ=255)

                             gTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGc                                                                                                                                                      <  1:4518755/121‑1 (MQ=255)

                               aCGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAgg                                                                                                                       <  2:1741437/150‑1 (MQ=255)

                                 ggAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGa                                                                                                                     <  1:2692547/150‑1 (MQ=255)

                                   aaaaaGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGAtt                                                                                                                   >  2:10763132/1‑150 (MQ=255)

                                           cGGGCGGTGCGCCGGTTCAGGTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAAttt                                                                                                           <  2:10585744/150‑1 (MQ=255)

                                                     gcCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCACGTTGTTGAATTTg                                                                                                 >  2:10360911/1‑150 (MQ=255)

                                                      ccGGTTCAGTTGCTGCTTTGTCCAGCAGGTCTTCAAGTTCGTTTTCTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGc                                                                                                <  1:5789789/150‑1 (MQ=255)

                                                       cGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGCTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCa                                                                                               <  2:3200946/150‑1 (MQ=255)

                                                         gTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGa                                                                                             >  2:9316621/1‑150 (MQ=255)

                                                             aGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAAttt                                                                                         <  2:8907763/150‑1 (MQ=255)

                                                               ttGCTGCTTTTTCCAGCAGGTCATCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGt                                                                                       <  2:7833993/150‑1 (MQ=255)

                                                                 gctgctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAg                                                                                     >  2:9565259/1‑150 (MQ=255)

                                                                 gctgctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAg                                                                                     >  2:6855503/1‑150 (MQ=255)

                                                                  ctgctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAgg                                                                                    >  1:8288675/1‑150 (MQ=255)

                                                                   tgctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGc                                                                                   <  1:9156268/150‑1 (MQ=255)

                                                                     ctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCg                                                                                 >  2:5422559/1‑150 (MQ=255)

                                                                     ctTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCg                                                                                 <  1:1897688/150‑1 (MQ=255)

                                                                     ctTTTTCCAGCAGGTCTTCAAGTTCGTTTATTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCg                                                                                 <  1:7110945/150‑1 (MQ=255)

                                                                           ccaccaCGTATTCAACTTCCTTTTTTGTTTCCGACATAACAACCAAAATTCAATCAAACTTCCGGGCGCAAATGCCAGATGCGCTACCCATATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAg                                                                           <  2:367774/150‑1 (MQ=25)

                                                                           ccAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAg                                                                           <  1:6822396/150‑1 (MQ=255)

                                                                            cagcagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAgg                                                                          <  1:1694951/150‑1 (MQ=255)

                                                                            aagcagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACAACAATTCATTAAACGTTCGGTGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCTCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAgg                                                                          >  2:10239463/2‑150 (MQ=255)

                                                                             cgcagGTCTTCCAGTTCGTTTTGTGTTTCGGACATCAGAACCACACTTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGc                                                                         <  1:6046469/149‑1 (MQ=255)

                                                                             agcagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGc                                                                         >  1:10439112/1‑150 (MQ=255)

                                                                             agcagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGc                                                                         >  2:10942867/1‑150 (MQ=255)

                                                                             agcagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGc                                                                         <  1:2305179/150‑1 (MQ=255)

                                                                               cagGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGt                                                                       >  2:7583240/1‑150 (MQ=255)

                                                                                   tCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGCTTCGCAATTTGTTGACTTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                   >  2:11122726/1‑150 (MQ=255)

                                                                                   tCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                   >  2:4179048/1‑150 (MQ=255)

                                                                                   tCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                   >  2:2914648/1‑150 (MQ=255)

                                                                                     ttCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                 <  1:256309/150‑1 (MQ=255)

                                                                                     ttCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                 >  2:5849515/1‑150 (MQ=255)

                                                                                     ttCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                 <  1:11653592/150‑1 (MQ=255)

                                                                                     ttCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                 <  2:6519451/150‑1 (MQ=255)

                                                                                      tCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgcc                                                                <  1:11511271/150‑1 (MQ=255)

                                                                                      tCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAAGTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgcc                                                                <  2:3990069/150‑1 (MQ=255)

                                                                                            tCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                          >  2:5692968/1‑150 (MQ=255)

                                                                                            tCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAAGTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                          >  2:917090/1‑150 (MQ=255)

                                                                                             cGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                         <  1:11777671/150‑1 (MQ=255)

                                                                                              gTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCgg                                                        <  1:5328352/150‑1 (MQ=37)

                                                                                              gTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                        <  2:4718323/150‑1 (MQ=255)

                                                                                               ttttttGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                       >  1:10312112/1‑150 (MQ=255)

                                                                                                  tttGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCata                                                    <  2:9025764/150‑1 (MQ=255)

                                                                                                     gTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCTGCATATTa                                                 <  1:7655086/150‑1 (MQ=255)

                                                                                                      tttCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAg                                                <  2:7231106/150‑1 (MQ=255)

                                                                                                       ttCGGACATAAGAACCACAATACATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGATTATCAGGCCTACAAGGGATTCGCAATTTGTTTAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCTCATCCGGCATTTTTGt                                               <  2:3802827/150‑1 (MQ=25)

                                                                                                        tCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGtt                                              >  1:388250/1‑150 (MQ=255)

                                                                                                          ggACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTa                                            >  2:11767765/1‑150 (MQ=255)

                                                                                                           gACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTAc                                           >  2:7961311/1‑150 (MQ=255)

                                                                                                           gACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTAc                                           <  2:8594056/150‑1 (MQ=255)

                                                                                                               tAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCg                                       <  2:276569/150‑1 (MQ=255)

                                                                                                                   aaCCACAATTCATTCAACGTTCGGAGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTaa                                   >  2:101381/1‑150 (MQ=255)

                                                                                                                    aCCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAAc                                  <  1:1377512/150‑1 (MQ=255)

                                                                                                                     ccACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACa                                 >  2:11887833/1‑150 (MQ=255)

                                                                                                                     ccACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACa                                 <  1:8406262/150‑1 (MQ=255)

                                                                                                                      cacaATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAg                                >  1:5610286/1‑150 (MQ=255)

                                                                                                                         aaTTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAtt                             <  2:6663862/150‑1 (MQ=255)

                                                                                                                          attcattcAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTa                            <  2:441815/150‑1 (MQ=255)

                                                                                                                          attcattcAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTa                            <  1:9316621/150‑1 (MQ=255)

                                                                                                                           ttcattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                           <  1:5456644/150‑1 (MQ=255)

                                                                                                                           ttcattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                           <  1:10754793/150‑1 (MQ=255)

                                                                                                                           ttcattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                           >  1:10010229/1‑150 (MQ=255)

                                                                                                                             cattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCt                         <  2:5175394/150‑1 (MQ=255)

                                                                                                                               gtcaCCGCTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACCAGGGATTCGCAATTTGTTGAATTTGCATAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTAt                       <  2:11333528/149‑1 (MQ=255)

                                                                                                                                tcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATc                      <  1:12284041/150‑1 (MQ=255)

                                                                                                                                 caACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCg                     >  2:3402672/1‑150 (MQ=255)

                                                                                                                                  aaCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTCTCGt                    >  2:9789296/1‑150 (MQ=255)

                                                                                                                                  aaCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGt                    >  2:4330744/1‑150 (MQ=255)

                                                                                                                                  aaCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGt                    <  1:8643087/150‑1 (MQ=255)

                                                                                                                                  aaCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATGTGTTGAATTTGCAGAAGTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGt                    >  2:7079457/1‑150 (MQ=255)

                                                                                                                                    cGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgc                  <  1:8557641/150‑1 (MQ=255)

                                                                                                                                     gtgcGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTATCTATCGTgcg                 <  2:10421528/147‑1 (MQ=255)

                                                                                                                                     gTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgcg                 <  1:805109/150‑1 (MQ=255)

                                                                                                                                     gTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgcg                 <  1:3702858/150‑1 (MQ=255)

                                                                                                                                     gTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgcg                 <  2:9618047/150‑1 (MQ=255)

                                                                                                                                          gggCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCacac            <  2:148493/150‑1 (MQ=255)

                                                                                                                                          gggCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCacac            <  1:8925061/150‑1 (MQ=255)

                                                                                                                                          gggCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCacac            >  1:6404455/1‑150 (MQ=255)

                                                                                                                                            gcgcAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCa          >  2:12277247/1‑150 (MQ=255)

                                                                                                                                                   tGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCg   <  1:10584310/150‑1 (MQ=255)

                                                                                                                                                    GCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGt  >  2:6196740‑M1/1‑150 (MQ=255)

CAGGCACCCAGACGGTGGATTCCAGTAGAGTACGGAAAAAGGCCGGGCGGTGCGCCGGTTCAGTTGCTGCTTTTTCCAGCAGGTCTTCAAGTTCGTTTTTTGTTTCGGACATAAGAACCACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGT  >  NC_000913/2654822‑2655119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.