New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3592644NA (NA)16 (0.020) 8/264 NT NA noncoding (81/99 nt) RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3592655 NA (NA)noncoding (92/99 nt) RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 847 total aligned reads displayed.

TAAGCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTT  >  NC_000913/3592507‑3592804
                                                                                                                                                    |                                                                                                                                                     
tAAGCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCa                                                                                                                                                      <  1:2956549‑M2/150‑2 (MQ=255)
 aaGCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCat                                                                                                                                                     <  2:7502103‑M2/150‑3 (MQ=255)
  aGCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatc                                                                                                                                                    >  2:3984815‑M2/1‑147 (MQ=255)
   gCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatca                                                                                                                                                   <  2:9262512‑M2/150‑5 (MQ=255)
    cGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatcag                                                                                                                                                  >  1:11985103‑M2/1‑145 (MQ=255)
     gggAAAATATAGAAGGTCTGACTCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatcagg                                                                                                                                                 >  2:11019714‑M2/1‑144 (MQ=255)
     gggAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatcagg                                                                                                                                                 <  1:6492028‑M2/150‑7 (MQ=255)
      ggAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatcaggc                                                                                                                                                <  1:7665487‑M2/150‑8 (MQ=255)
      ggAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCatcaggc                                                                                                                                                >  2:5564985‑M2/1‑143 (MQ=255)
          aaTATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAAtt                                                                                                                                            >  1:10018829/1‑150 (MQ=255)
           atatAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAAttt                                                                                                                                           <  1:4577950/150‑1 (MQ=255)
              taGACGGTCTGAATCAATCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTAc                                                                                                                                        <  1:7080464/150‑1 (MQ=255)
               aGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACa                                                                                                                                       <  2:5432156/150‑1 (MQ=255)
                  aGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACAttt                                                                                                                                    <  1:2247733/150‑1 (MQ=255)
                  aGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACAttt                                                                                                                                    <  2:9607002/150‑1 (MQ=255)
                    gTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGt                                                                                                                                  >  2:2360277/1‑150 (MQ=255)
                    gTCTGAATCAAACTCGACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGt                                                                                                                                  <  2:1030282/150‑1 (MQ=255)
                     tCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTc                                                                                                                                 >  1:605303/1‑150 (MQ=255)
                     tCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTc                                                                                                                                 >  1:9957230/1‑150 (MQ=255)
                     accgcaTCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTCAACGCCTTATCAGGCCTACCCGATCGGGCATATTCCACATACAGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTc                                                                                                                                 <  1:11816353/145‑1 (MQ=37)
                      cTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCa                                                                                                                                >  2:9743057/1‑150 (MQ=255)
                      cTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCa                                                                                                                                >  1:1798677/1‑150 (MQ=255)
                      cTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCa                                                                                                                                <  2:2069243/150‑1 (MQ=255)
                       tGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCAc                                                                                                                               <  1:3688371/150‑1 (MQ=255)
                       tGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCAc                                                                                                                               <  1:3135722/150‑1 (MQ=255)
                       tGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCAc                                                                                                                               <  1:5254582/150‑1 (MQ=255)
                        gAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCACTTTTACATTTGTCAcc                                                                                                                              >  2:11354714/1‑150 (MQ=255)
                             aaaCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGtct                                                                                                                         >  1:2638557/1‑150 (MQ=255)
                              aaCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGtctc                                                                                                                        >  1:9556863/1‑150 (MQ=255)
                              aaCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGtctc                                                                                                                        >  1:3408111/1‑150 (MQ=255)
                              aaCTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGtctc                                                                                                                        >  1:5026635/1‑150 (MQ=255)
                                ctctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaa                                                                                                                      >  1:3934112/1‑150 (MQ=255)
                                 tctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACGCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaaa                                                                                                                     <  1:7265008/150‑1 (MQ=255)
                                  ctACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAg                                                                                                                    >  1:8127425/1‑150 (MQ=255)
                                    aCAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTTGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa                                                                                                                  <  1:9263744/150‑1 (MQ=255)
                                    aCAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa                                                                                                                  <  2:2587938/150‑1 (MQ=255)
                                    aCAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa                                                                                                                  <  2:4308025/150‑1 (MQ=255)
                                         ttGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtt                                                                                                             <  2:1972525/150‑1 (MQ=255)
                                           gCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                           <  2:12259617/150‑1 (MQ=255)
                                           gCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                           <  1:11098932/150‑1 (MQ=255)
                                           gCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                           <  2:6358532/150‑1 (MQ=255)
                                           gCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt                                                                                                           <  1:4265349/150‑1 (MQ=255)
                                               aTCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACt                                                                                                       >  2:6194215/1‑150 (MQ=255)
                                                tCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTc                                                                                                      <  2:6512068/150‑1 (MQ=255)
                                                tCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTc                                                                                                      <  2:11721787/150‑1 (MQ=255)
                                                tCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTc                                                                                                      >  1:8793563/1‑150 (MQ=255)
                                                tCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTc                                                                                                      >  2:6060549/1‑150 (MQ=255)
                                                        tGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaa                                                                                              <  1:8996376/150‑1 (MQ=255)
                                                          ccGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaatc                                                                                            >  2:10232874/1‑150 (MQ=255)
                                                          ccGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaatc                                                                                            >  1:2404040/1‑150 (MQ=255)
                                                           ctgataaggcgTTTACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTatcaatca                                                                                           >  2:10874717/8‑150 (MQ=37)
                                                               tGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACgt                                                                                       <  1:4775162/150‑1 (MQ=255)
                                                                 cggcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACgtgt                                                                                     >  2:4194932/1‑150 (MQ=255)
                                                                  ggcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGtt                                                                                    <  2:8453826/150‑1 (MQ=255)
                                                                   gcgTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGtta                                                                                   <  1:2121868/150‑1 (MQ=255)
                                                                       aaaCGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTAc                                                                               <  2:5763887/150‑1 (MQ=255)
                                                                         aCGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTAccc                                                                             <  2:12002344/150‑1 (MQ=255)
                                                                            ccTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGcc                                                                          >  1:7857406/1‑150 (MQ=255)
                                                                                aTCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTaaa                                                                      <  1:5879645/150‑1 (MQ=255)
                                                                                   aGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATAc                                                                   >  2:11555612/1‑150 (MQ=255)
                                                                                     gCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGc                                                                 <  2:8655212/150‑1 (MQ=255)
                                                                                     gCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGc                                                                 <  2:7884290/150‑1 (MQ=255)
                                                                                      ccTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCa                                                                <  2:355598/150‑1 (MQ=255)
                                                                                      ccTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCa                                                                <  1:5463480/150‑1 (MQ=255)
                                                                                          cAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTtc                                                            >  1:2819550/1‑150 (MQ=255)
                                                                                             gATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCa                                                         >  2:3233359/1‑150 (MQ=255)
                                                                                             gATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCa                                                         >  1:1667068/1‑150 (MQ=255)
                                                                                                   gCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCtt                                                   >  2:7380537/1‑150 (MQ=255)
                                                                                                     aaaTTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCa                                                 >  2:10072886/1‑150 (MQ=255)
                                                                                                        ttCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCTACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTc                                              <  2:8268281/150‑1 (MQ=255)
                                                                                                        ttCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTc                                              <  1:1514021/150‑1 (MQ=255)
                                                                                                          cAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGc                                            <  2:2956566/150‑1 (MQ=255)
                                                                                                           aaCATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGcc                                           >  2:2730804/1‑150 (MQ=255)
                                                                                                           aaCATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGcc                                           >  2:7169324/1‑150 (MQ=255)
                                                                                                           aaCATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGcc                                           >  1:7471551/1‑150 (MQ=255)
                                                                                                           aaCATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGcc                                           >  2:4943022/1‑150 (MQ=255)
                                                                                                             cATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCcag                                         <  2:1471031/150‑1 (MQ=255)
                                                                                                              atatTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCcagc                                        >  2:1311236/1‑150 (MQ=255)
                                                                                                                  tGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAgcg                                    <  2:9329835/150‑1 (MQ=255)
                                                                                                                   gCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAgcgc                                   <  1:5691705/150‑1 (MQ=255)
                                                                                                                       cTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCa                               >  2:1624465/1‑150 (MQ=255)
                                                                                                                        tCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCAc                              >  1:6278158/1‑150 (MQ=255)
                                                                                                                        tCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCAc                              >  2:3717810/1‑150 (MQ=255)
                                                                                                                          aCCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCa                            <  1:1313748/150‑1 (MQ=255)
                                                                                                                           cccAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAg                           >  1:9346963/1‑150 (MQ=255)
                                                                                                                           cccAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAg                           >  2:6676261/1‑150 (MQ=255)
                                                                                                                               gTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATc                       <  1:11503737/150‑1 (MQ=255)
                                                                                                                                 aGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCgg                     <  1:12152622/150‑1 (MQ=255)
                                                                                                                                  ggCCTGATAAGCGCAGCGCatcaggcctactgggtgagtggcaatatgttgaatttgcacgatcttgtaggcctgataaggcgtttacgccgcatccggcatgaaacgatgagcaatctgtagagtttgattcagaccttctatattttc                    <  1:9708959‑M2/150‑132 (MQ=255)
                                                                                                                                    ccTGATAAGCGCAGCGCatcaggcctactgggtgagtggcaatatgttgaatttgcacgatcttgtaggcctgataaggcgtttacgccgcatccggcatgaaacgatgagcaatctgtagagtttgattcagaccttctatattttccc                  <  2:8855299‑M2/150‑134 (MQ=255)
                                                                                                                                    ccTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGaaa                  <  2:12167134/150‑1 (MQ=255)
                                                                                                                                    ccTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTGTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCGTCATTCGCCAGCAGCGCATCACCAGTCTCGGaaa                  >  2:8117905/1‑150 (MQ=255)
                                                                                                                                     cTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAg                 >  1:354174/1‑150 (MQ=255)
                                                                                                                                      tGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGc                >  1:84549/1‑150 (MQ=255)
                                                                                                                                          aaGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTa            <  2:4541837/150‑1 (MQ=255)
                                                                                                                                          aaGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTa            >  1:1033504/1‑150 (MQ=255)
                                                                                                                                            gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACa          >  1:6906667/1‑150 (MQ=255)
                                                                                                                                              gccgcgcaTCCGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGCAAGCACTCCATg        >  2:10582132/4‑150 (MQ=255)
                                                                                                                                              gcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCACCGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATg        <  2:5285095/150‑1 (MQ=255)
                                                                                                                                                  cgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCg    >  1:10633570/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TAAGCGGGAAAATATAGAAGGTCTGAATCAAACTCTACAGATTGCTCATCGTTTCATGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTT  >  NC_000913/3592507‑3592804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.