| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,907,574 | T→C | 7.0% | D2G (GAC→GGC) | phoU ← | negative regulator of PhoR/PhoB two‑component regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,907,574 | 0 | T | C | 7.0% | 2805.7 / 135.3 | 875 | D2G (GAC→GGC) | phoU | negative regulator of PhoR/PhoB two‑component regulator |
| Reads supporting (aligned to +/- strand): ref base T (404/409); new base C (38/23); total (442/433) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.34e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.83e-01 | |||||||||||
Only 100 of 892 total aligned reads displayed.
TCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAG > NC_000913/3907425‑3907723 | cGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTc < 2:9537753/150‑1 (MQ=255) cGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTc < 2:2586104/150‑1 (MQ=255) gCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGccc < 2:3877566/150‑1 (MQ=255) gCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGccc < 1:4230538/150‑1 (MQ=255) gCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTcc < 2:674799/150‑1 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCa > 1:326195/1‑150 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCa > 1:2694646/1‑150 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGCCCa < 2:11761526/150‑1 (MQ=255) ccAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGATCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTCTCCa > 1:7375118/1‑150 (MQ=255) cAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCAt < 1:989782/150‑1 (MQ=255) tGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACt < 1:9375740/150‑1 (MQ=255) ggTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGaa < 2:4812781/150‑1 (MQ=255) gTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAAt > 1:4432488/1‑150 (MQ=255) aTGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCaa < 1:6645180/150‑1 (MQ=255) gCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAAcc < 2:8271260/150‑1 (MQ=255) gCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAAcc < 2:5210939/150‑1 (MQ=255) aTCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGt < 2:10735062/150‑1 (MQ=255) aTCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGt > 1:3482653/1‑150 (MQ=255) cgcgGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTaa < 2:6459015/150‑1 (MQ=255) gcgGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAAc > 1:910542/1‑150 (MQ=255) gcgGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAAc > 2:7453174/1‑150 (MQ=255) gATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCTTAACGACCg > 2:1061432/1‑150 (MQ=255) gATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCg < 2:11254678/150‑1 (MQ=255) ttGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTCTTAAGATTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGt > 2:6915534/1‑150 (MQ=255) aTCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATg < 2:4609715/150‑1 (MQ=255) tCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGt > 2:5554567/1‑150 (MQ=255) tCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGt > 1:7910639/1‑150 (MQ=255) cAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACAGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTa < 2:2140783/150‑1 (MQ=255) gAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTgcggtcgg > 1:10000138/1‑143 (MQ=255) aGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGtctt > 1:7670327/1‑150 (MQ=255) gctgctCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgt > 1:8859181/1‑150 (MQ=255) tgcaCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAATATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgttt < 1:11629656/150‑1 (MQ=255) tCCACCATGCCGCCCTTGGTCATCACCTGCGTGCGGATACTTTCCTGTTCGGCTTTGAACTGGCCGGAAATTTGTTTATTAAGATTGAGACTGTCCATACCGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgtt < 1:4786137/150‑1 (MQ=255) tCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgtt > 2:3558150/1‑150 (MQ=255) tCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgtt > 2:3275428/1‑150 (MQ=255) tCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCtgtttgtt > 2:1981869/1‑150 (MQ=255) cccccaGGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGAAACGACCGGTGATGTAGTCTTCTgtttgttt < 1:8459090/147‑1 (MQ=255) ccaccaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTGGAACTGGCCGGAAATATGTTTATTAACATTGAGACTGCCCATACCGCCCTCCTGAAACAACCGTAACGACCGGTGATGTAGTCTTCTgtttgttt < 1:4672217/150‑1 (MQ=255) accaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttct > 1:7772485/1‑150 (MQ=255) accaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttct > 2:11616116/1‑150 (MQ=255) accaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttct > 1:1440334/1‑150 (MQ=255) accaTGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTttct > 1:1011514/1‑150 (MQ=255) ccgccCATGGTCATCACCTGGGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGTAAATATTTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTg < 1:11281357/150‑1 (MQ=255) ccgccCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTg > 1:7160261/1‑150 (MQ=255) ccgacCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGAGAGGTAGTCTTCTGTTTGTTTCTTCGCTg > 2:9175283/1‑150 (MQ=255) cgccCTTGGTCATCACCTGCGTGCGGATACTTTCCATTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTgg < 1:11805793/150‑1 (MQ=255) cgccCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTgg > 1:528185/1‑150 (MQ=255) ccATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCtt < 2:5797558/150‑1 (MQ=255) caccaCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAAc > 2:1768776/4‑150 (MQ=255) caCCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGa > 2:9392168/1‑150 (MQ=255) tgcgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGt < 1:3687069/150‑1 (MQ=255) cgtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTcc < 1:6302431/150‑1 (MQ=255) gtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCg > 2:77620/1‑150 (MQ=255) gtgcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCg > 1:11057567/1‑150 (MQ=255) gcgGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCgtg > 2:10410206/1‑150 (MQ=255) ggATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGtt > 1:8117838/1‑150 (MQ=255) gATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTg < 2:5983677/150‑1 (MQ=255) gATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTg > 2:7216181/1‑150 (MQ=255) aCTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGCTGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTg < 1:9518684/150‑1 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTCAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGaa < 2:2975347/150‑1 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGaa > 1:5553233/1‑150 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGaa > 2:2799096/1‑150 (MQ=255) tttCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTCGCTTGGTGAACAGATCGTCCGTGATGCTGaa > 2:12159129/1‑150 (MQ=255) ggccAGTTCAACGCCGAACTGGCCGGAAATATGTTTATTAAGATTGAGACAGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAAc > 2:10263116/3‑150 (MQ=255) cAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtca > 1:12209180/1‑150 (MQ=255) aGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaa > 2:9736090/1‑150 (MQ=255) aGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaa > 1:2082251/1‑150 (MQ=255) gTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaat < 1:1805331/150‑1 (MQ=255) gTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaat < 1:2405252/150‑1 (MQ=255) ttCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaatc > 2:8648407/1‑150 (MQ=255) tCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaatca < 1:5805484/150‑1 (MQ=255) cGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACtcaatcaa > 2:10919788/1‑150 (MQ=255) gTTGAACTGGCCGTAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCg < 2:2314470/150‑1 (MQ=255) tGAACTGGCCGTAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGcc < 1:3397360/150‑1 (MQ=255) tGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGcc < 1:10508813/150‑1 (MQ=255) gAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGccc > 1:2832876/1‑150 (MQ=255) aaCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCa < 1:11968469/150‑1 (MQ=255) aaCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCa < 2:4252715/150‑1 (MQ=255) aaCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCa < 1:6485881/150‑1 (MQ=255) aCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAg < 2:89660/150‑1 (MQ=255) aCTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAg < 2:1367242/150‑1 (MQ=255) gCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTAc < 2:12255197/150‑1 (MQ=255) gCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTAc > 2:8868687/1‑150 (MQ=255) cctgAAATATTTTTATTAAGATTGATAATTTCCATAACGCACTCCTGTATCTACCGTAACGTCCGGTGATTTAGTCTTCTGTTTGTTTCTTCTCTTGCTTGTTGAACAGATCGTCAGTGTTGATGAACTCAATCAATTCTACCAGGTACa < 2:5052438/147‑1 (MQ=255) ccGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACa < 1:9681458/150‑1 (MQ=255) aaTATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGt > 1:10675843/1‑98 (MQ=255) tatGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGc > 1:4975372/1‑150 (MQ=255) ttattaATATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTTTTGTTGTCTTCTTTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTAAATCAATTCGCCCAGGTACATAAACGCCgtgt < 1:1028255/150‑1 (MQ=255) ttaAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGt > 1:10882151/1‑150 (MQ=255) taAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTc < 2:11908034/150‑1 (MQ=255) aaGATTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCg > 2:8506869/1‑150 (MQ=255) gATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGa > 1:2983612/1‑150 (MQ=255) gATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGa > 2:6182701/1‑150 (MQ=255) aTTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaa > 2:1492309/1‑150 (MQ=255) aTTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaa > 1:3926014/1‑150 (MQ=255) aTTGAGACTGCCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaa < 1:8610845/150‑1 (MQ=255) gagaCTGTCCATAACGCACTCCTGAATCAACCTTAACGACCGGTGATGTAGTCTTATGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGTTACATAAACGCCGTGTGGTCGGaacaa < 2:4049292/150‑1 (MQ=255) agaCTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGaacaac > 2:8025731/1‑150 (MQ=255) cTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAAcgcg > 2:4455924/1‑150 (MQ=255) tGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACgcgc > 1:6835804/1‑150 (MQ=255) | TCGCCAGATCGCTGTCCTGGTTATGCATCGCGGTGATTGCATCAGAAAGCTGCTGCTCCACCATGCCGCCCATGGTCATCACCTGCGTGCGGATACTTTCCAGTTCGGCGTTGAACTGGCCGGAAATATGTTTATTAAGATTGAGACTGTCCATAACGCACTCCTGAATCAACCGTAACGACCGGTGATGTAGTCTTCTGTTTGTTTCTTCGCTGGCTTGGTGAACAGATCGTCCGTGTTGCTGAACTCAATCAATTCGCCCAGGTACATAAACGCCGTGTGGTCGGAACAACGCGCAG > NC_000913/3907425‑3907723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |