| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,297,107:1 | +C | 100% | coding (538/624 nt) | ccmA ← | heme export ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,297,107 | 1 | . | C | 90.0% | 394.5 / 39.2 | 110 | coding (538/624 nt) | ccmA | heme export ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base . (4/7); new base C (41/58); total (45/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 129 total aligned reads displayed.
CGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAGCGACG > NC_000913/2296970‑2297237 | cgcTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACTCCCTGCGGCCCTCGATTGAGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGGGGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cc < 2:281154/140‑1 (MQ=255)cgcTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cc < 2:1539628/140‑1 (MQ=255)cgcTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cc < 1:1802489/140‑1 (MQ=255)cgcTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cc < 2:1539629/140‑1 (MQ=255) tGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑c < 1:921065/140‑1 (MQ=255) tGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑c < 2:291268/140‑1 (MQ=255) tGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑c < 1:799106/140‑1 (MQ=255) tGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑c < 2:11508/140‑1 (MQ=255) ggCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cc < 2:123958/140‑2 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGCACATCCTGCGGCCCTCGTTTGCGTNAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGNGTAGTCAGAATCACAAT‑cccccn‑cct < 2:118260/140‑3 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACCTCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGCGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cct < 2:118016/140‑3 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cct < 2:817814/140‑3 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cct < 1:736783/140‑3 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cct < 2:691189/140‑3 (MQ=255) gCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cct < 1:278577/140‑3 (MQ=255) aaaCGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cctgct > 2:32667/1‑135 (MQ=255) aaaCGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑cccccc‑cctgct > 2:679946/1‑135 (MQ=255) aCGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCTGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTcc < 2:577887/140‑1 (MQ=255) aCGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCTGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTcc < 2:580299/140‑1 (MQ=255) aCGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTcc < 2:806760/140‑1 (MQ=255) acacGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtg < 1:236239/140‑1 (MQ=255) acacGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtg < 1:741870/140‑1 (MQ=255) cacGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtgc > 2:1170722/1‑140 (MQ=255) acGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtgct < 1:858875/140‑1 (MQ=255) acGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtgct < 1:824287/140‑1 (MQ=255) acGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTAtgct < 2:1780340/140‑1 (MQ=255) aGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTgcgc > 2:1738321/1‑140 (MQ=255) aGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTgcgc > 1:1179041/1‑140 (MQ=255) aGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTgcgc > 2:1738383/1‑140 (MQ=255) aGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTgcgc > 2:68921/1‑140 (MQ=255) gCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGcc < 2:305885/140‑1 (MQ=255) cTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCa > 1:1139249/1‑140 (MQ=255) cTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCa > 1:1070188/1‑140 (MQ=255) cTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCa > 1:342619/1‑140 (MQ=255) cTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCa > 1:1828000/1‑140 (MQ=255) tCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATa > 2:727252/1‑140 (MQ=255) tCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATa > 2:727253/1‑140 (MQ=255) aGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACg < 1:486282/140‑1 (MQ=255) aGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACg < 1:423933/140‑1 (MQ=255) aGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACg < 2:595748/140‑1 (MQ=255) gACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGc > 1:230141/1‑140 (MQ=255) ggAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTgg > 1:462480/1‑140 (MQ=255) ggAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTgg > 1:175905/1‑140 (MQ=255) ggAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTgg > 1:462300/1‑140 (MQ=255) aaaaTGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCTGTATCTCAATCCCCCCC‑CTGCTCCGTCTGCTGCGCCATACGCTGGGt > 2:1905060/1‑140 (MQ=255) aaaaTGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGt > 1:1026938/1‑140 (MQ=255) aaaaTGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGt > 1:825042/1‑140 (MQ=255) aaaaTGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTc < 2:1036771/140‑1 (MQ=255) tGCGCCTGAACTTCATGCGGCCCTCGTTTGCGTCTGGGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACACTCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGa < 2:1601987/140‑1 (MQ=255) tGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGa < 2:1460846/140‑1 (MQ=255) gcCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGa > 2:1085101/1‑140 (MQ=255) gAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGa < 2:1918833/140‑1 (MQ=255) gAACATCATGCGGCCCTCGATTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGa < 2:825979/140‑1 (MQ=255) aCATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGaca < 2:156205/140‑1 (MQ=255) aCATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGaca < 1:38577/140‑1 (MQ=255) atGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGtt < 1:401911/140‑1 (MQ=255) atGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGtt < 1:401728/140‑1 (MQ=255) ccTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCa > 1:258215/1‑140 (MQ=255) cTCGTTTGCGTCAGTGAAATGCGGCGAATTTTTCTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCaa > 2:1596747/1‑140 (MQ=255) cTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCaa > 2:210322/1‑140 (MQ=255) gTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATcg < 1:1572612/140‑1 (MQ=255) cGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTa > 2:386771/1‑140 (MQ=255) cGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTa > 1:630878/1‑140 (MQ=255) cGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTa > 1:775325/1‑140 (MQ=255) cGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACg > 2:926127/1‑99 (MQ=255) cGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACg < 1:926127/99‑1 (MQ=255) gTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTaa < 2:577252/140‑1 (MQ=255) gTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAgg < 2:109419/140‑1 (MQ=255) gcggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCtcgtcg < 2:862820/140‑1 (MQ=255) gcggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCtcgtcg < 2:1320700/140‑1 (MQ=255) gcggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCtcgtcg < 1:35746/140‑1 (MQ=255) gcggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCtcgtcg < 1:604596/140‑1 (MQ=255) gcggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCtcgtcg < 1:604609/140‑1 (MQ=255) ggcgATTTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCTTACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAg < 2:84277/140‑1 (MQ=255) ggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAg < 1:131343/140‑1 (MQ=255) ggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAg < 2:218383/140‑1 (MQ=255) ggcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAgg < 2:1421513/140‑1 (MQ=255) gcgATTTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTAAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAgg < 1:983487/140‑1 (MQ=255) gcgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAgg < 1:983800/140‑1 (MQ=255) cgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGTATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGa > 1:1027379/1‑140 (MQ=255) cgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTATCGTCAATCGCGGTAATAGGCTCGTCGAGGa > 2:172782/1‑140 (MQ=255) cgAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGa > 1:1026682/1‑140 (MQ=255) tACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATaa < 1:1283501/140‑1 (MQ=255) tACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATaa < 1:862002/140‑1 (MQ=255) aCTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACg < 2:182002/140‑1 (MQ=255) cTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACg < 2:1070188/140‑1 (MQ=255) gaGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCCGCTGCTCCGTATGCTGCGCCGTACGCTGGGTCAGACGATCGACACCGTTATCGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGc < 2:1005179/139‑1 (MQ=255) gCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCAc < 2:1098011/140‑1 (MQ=255) gCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCAc < 1:122250/140‑1 (MQ=255) cGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGt < 2:1769032/140‑1 (MQ=255) cGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGt < 1:1561532/140‑1 (MQ=255) cGTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGt < 2:680611/140‑1 (MQ=255) gTTGAGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTc < 2:1514095/140‑1 (MQ=255) aGCGGCTGGTGGGTAGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGcc > 1:1716569/1‑140 (MQ=255) cTGGTGGGTTGTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCATTCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCTCGGGTCAGCCACAGa < 1:233249/140‑1 (MQ=255) cTGGTGGGTAGTCAGAATCACCATCCCCCCC‑CTGCTGCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATTCATAACGTGGCACGGGTCAGCCACAGa < 2:105390/140‑1 (MQ=255) gTCAGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAg > 1:722701/1‑140 (MQ=255) aGAATCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAGCGa > 1:1490877/1‑140 (MQ=255) aGAATCACAATCCCCCCC‑CTGCTCCGTAAGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAGCGa > 1:1336538/1‑140 (MQ=255) aaTCACAATCCCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAGCGAcg < 1:112926/140‑1 (MQ=255) | CGCTATGGCGAAACGCTACACGCAGCTCAAGACGGAAAATGCGCCAGAACATCATGCGGCCCTCGTTTGCGTCAGTGAAATGCGGCGAATTTTACTTTCAGCAACGTTGAGCGGCTGGTGGGTAGTCAGAATCACAAT‑CCCCCC‑CTGCTCCGTATGCTGCGCCATACGCTGGGTCAGACGATCGACACCGTTAACGTCAATCGCGGTAAAAGGCTCGTCGAGGATCCATAACGTGGCACGGGTCAGCCACAGACGCGCTAAAGCGACG > NC_000913/2296970‑2297237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |