BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566098 =	92 (0.900)	8 (0.090) +GAGAGGAGGATTACAAA	7/222	NT	7.8%	pseudogene (279/279 nt)	exoD	pseudogene, DLP12 prophage; phage‑type exonuclease family;Phage or Prophage Related
*	?	NC_000913	4397412 =	126 (1.240)	8 (0.090) +GAGAGGAGGATTACAAA	7/222	NT	7.8%	coding (1/1848 nt)	mutL	methyl‑directed mismatch repair protein

Only 100 of 116 total aligned reads displayed.

TTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCAC  >  NC_000913/565960‑566237

ttcTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTc                                                                                                                                            >  1:297147/1‑140 (MQ=255)

ttcTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTc                                                                                                                                            >  1:1781690/1‑140 (MQ=255)

  cTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCAt                                                                                                                                          >  2:1158419/1‑140 (MQ=255)

           gcatcgaggctgtttttcactagttctttgactaccgacgcaggtcgctcgaccacctcacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGc                                                                                                                                 >  2:1711484‑M1/128‑140 (MQ=255)

               aCATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTccc                                                                                                                             >  2:1257705/1‑140 (MQ=255)

                 aggctgtttttcactagttctttgactaccgacgcaggtcgctcgaccacctcacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCa                                                                                                                           <  1:1193575‑M1/19‑1 (MQ=255)

                     tctttcGTCTGTTATGCCATCACCCGAGCTCACCTGTACAGAATGCAGCTGAGACTGAAGCGCCGCAATGCAGGCATGCCGGGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGACATCGCCCTTGCTCCCCAACTa                                                                                                                       >  2:1292335/1‑140 (MQ=255)

                           ctctGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAAc                                                                                                                 <  2:1864336/140‑1 (MQ=255)

                             ctGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCATTGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCa                                                                                                               <  2:1400166/140‑1 (MQ=255)

                             ccggtATGGCATCACCCGCGCTCACCTCGACATTATGCACCGGAGACTGAAGCGCCGCAATGCATGCTTGCCGAGATGTGAGTTACCCGGATATTAACGTGTGGATGCGTCATCGCAATTGCTCCCCCAATACAAAACCa                                                                                                               <  2:890597/136‑1 (MQ=255)

                                ttATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAAtt                                                                                                            <  2:1761561/140‑1 (MQ=255)

                                 tATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAAttt                                                                                                           <  2:1015146/140‑1 (MQ=255)

                                   tGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCa                                                                                                         >  1:1697592/1‑140 (MQ=255)

                                     ccATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGc                                                                                                       >  1:954073/1‑140 (MQ=255)

                                     ccATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGc                                                                                                       >  1:954104/1‑140 (MQ=255)

                                       tgactaccgacgcaggtcgctcgaccacctcacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCa                                                                                                     <  2:1012022‑M1/41‑1 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACACAACCAATTTCAGCCAg                                                                                                    >  2:1328190/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAATCCAATTTCAGCCAg                                                                                                    >  1:225999/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAg                                                                                                    >  1:807652/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAg                                                                                                    >  1:204743/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAg                                                                                                    >  1:1422166/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAg                                                                                                    >  1:1421374/1‑140 (MQ=255)

                                        tCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAg                                                                                                    >  2:1747693/1‑140 (MQ=255)

                                          aCCCGCGCTCACCTTGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGAGTCATCGCCATTGCTCCCCAAATACAAAACCAATGTCAGCCAGTg                                                                                                  >  2:1485666/1‑140 (MQ=255)

                                          aCCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTg                                                                                                  >  2:617530/1‑140 (MQ=255)

                                                gcTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGTCTCGt                                                                                            >  2:902665/1‑140 (MQ=255)

                                                    aCCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCAt                                                                                        >  1:822043/1‑140 (MQ=255)

                                                       tGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCAtttt                                                                                     <  2:534312/140‑1 (MQ=255)

                                                         gACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCAtttttt                                                                                   >  2:358067/1‑140 (MQ=255)

                                                          aCAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTc                                                                                  >  2:1845348/1‑140 (MQ=255)

                                                          aCAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCAACGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTc                                                                                  >  1:516428/1‑140 (MQ=255)

                                                            aGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATATCAGCCAGTGCCTCGTCCATTTTTTCGa                                                                                >  2:1610542/1‑140 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGTAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              <  1:1450063/140‑1 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACATAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCTATg                                                                              <  1:1158419/140‑1 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              >  2:1199935/1‑140 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              <  1:865768/140‑1 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              <  2:1395578/140‑1 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              <  1:866090/140‑1 (MQ=255)

                                                              tATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATg                                                                              >  1:1406756/1‑140 (MQ=255)

                                                                tGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            >  1:1852756/1‑140 (MQ=255)

                                                                tGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            >  2:241008/1‑140 (MQ=255)

                                                                tGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            >  1:1359380/1‑140 (MQ=255)

                                                                tGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGCGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAATCCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            >  1:1359385/1‑140 (MQ=255)

                                                                cacctcacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            <  1:416699‑M1/66‑1 (MQ=255)

                                                                cacctcacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGaa                                                                            <  1:1152600‑M1/66‑1 (MQ=255)

                                                                   atctgagaCTGAAGCGCCGCAATGCAGGCTTTACTTGTTGTGAGGTAACCGGATATTATCGTTAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAAATTCACCCAGTGCCTCGTCCATTTTTTCGATGAACTc                                                                         <  1:853244/136‑1 (MQ=255)

                                                                   aGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTc                                                                         <  1:1718281/140‑1 (MQ=255)

                                                                     cacctgcggcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCg                                                                       <  1:1652458‑M1/71‑1 (MQ=255)

                                                                      ggAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCgg                                                                      <  2:3653/140‑1 (MQ=255)

                                                                        agaCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCa                                                                    >  1:565420/1‑140 (MQ=255)

                                                                        agaCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCa                                                                    >  1:465698/1‑140 (MQ=255)

                                                                        agaCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCa                                                                    >  1:1470604/1‑140 (MQ=255)

                                                                        agaCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCa                                                                    >  2:1095702/1‑140 (MQ=255)

                                                                          aCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCAcc                                                                  >  2:1281232/1‑140 (MQ=255)

                                                                          aCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCAcc                                                                  >  2:1851451/1‑140 (MQ=255)

                                                                          aCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCAcc                                                                  >  1:1471413/1‑140 (MQ=255)

                                                                          aCTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAAGTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCAcc                                                                  >  2:518915/1‑140 (MQ=255)

                                                                            tGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCAt                                                                <  2:156783/140‑1 (MQ=255)

                                                                            tGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCAt                                                                <  1:193926/140‑1 (MQ=255)

                                                                            tGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCAt                                                                <  1:1830968/140‑1 (MQ=255)

                                                                             gcaatctggttcgccagttgtggcggtaagacctgaattggcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGAtc                                                               <  2:1844949‑M1/79‑1 (MQ=255)

                                                                                    cgcAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCaa                                                        >  1:1008898/1‑140 (MQ=255)

                                                                                      cAATGCAGGCTTGCCGTGGTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCaaaa                                                      >  1:1876337/1‑140 (MQ=255)

                                                                                                ttGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGt                                            <  1:596163/140‑1 (MQ=255)

                                                                                                ttGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTACATTTTTTCGATGAACTCCGGCACCATCTCGTAAAAACTCGCCATGt                                            <  1:409173/140‑1 (MQ=255)

                                                                                                ttGCCGTGTTGTCAGGTACCCGGATATTATCGTGAGGATGAGTCCTCGCCATTGCTCCCCCAATACAAAACCAATTTCAGCCAGTGCCTCGTCCAGTTTTTCGCTGAACTCCGGCACCATCTCGTCAAGACTCGCCATGt                                            >  2:589364/1‑140 (MQ=255)

                                                                                                 tGCCGTGTTGTGGGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTa                                           >  1:1530370/1‑140 (MQ=255)

                                                                                                   ccGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACt                                         >  2:1685217/1‑140 (MQ=255)

                                                                                                        ttgtGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCa                                    >  1:1357008/1‑140 (MQ=255)

                                                                                                        ttgtGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCa                                    >  2:1571037/1‑140 (MQ=255)

                                                                                                              ggTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGc                              <  2:1200406/140‑1 (MQ=255)

                                                                                                              ggTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGc                              <  2:1200781/140‑1 (MQ=255)

                                                                                                                tACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATGTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTc                            >  1:721509/1‑140 (MQ=255)

                                                                                                                   ccGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAAt                         <  1:241008/140‑1 (MQ=255)

                                                                                                                     ggATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCa                       <  2:855712/140‑1 (MQ=255)

                                                                                                                     ggATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCa                       <  1:1553376/140‑1 (MQ=255)

                                                                                                                     ggATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCa                       <  1:1474782/140‑1 (MQ=255)

                                                                                                                     gcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCa                       >  1:457026‑M1/22‑140 (MQ=255)

                                                                                                                     gcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCa                       >  1:1748166‑M1/22‑140 (MQ=255)

                                                                                                                     gcattttgtaatcctcctctcTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTAGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCa                       >  1:457010‑M1/22‑140 (MQ=255)

                                                                                                                         attatCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGAc                   >  2:1864592/1‑140 (MQ=255)

                                                                                                                          ttatCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACa                  >  1:1739317/1‑140 (MQ=255)

                                                                                                                          ttatCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACa                  <  2:39514/140‑1 (MQ=255)

                                                                                                                          tgatCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCCTCTCGTCAAATCTCGCCTTGTACTTTTCATTCCGCTCAATCACGACa                  <  2:1409477/138‑1 (MQ=255)

                                                                                                                               gTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATg             <  2:1398968/140‑1 (MQ=255)

                                                                                                                                tGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGc            >  2:93564/1‑140 (MQ=255)

                                                                                                                                tGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGc            >  2:1067783/1‑140 (MQ=255)

                                                                                                                                tGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGc            >  1:24819/1‑140 (MQ=255)

                                                                                                                                 gAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCa           >  2:656653/1‑140 (MQ=255)

                                                                                                                                 gAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACATTTCATTCCGCTCAATCACGACATAATGCa           <  2:804717/140‑1 (MQ=255)

                                                                                                                                   gaaTGCGTCATCGCCAGTGATCCCCAAATACAAAACCAATTACAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCAACATCTCGTCAAAACTCGCAATGAAATTATCATTCCGCTCAATCACGAAATAAAGCatg         >  2:769929/3‑138 (MQ=255)

                                                                                                                                    gATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGc        >  2:538738/1‑140 (MQ=255)

                                                                                                                                    gATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGc        >  2:543800/1‑140 (MQ=255)

                                                                                                                                    gATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGc        >  1:1380350/1‑140 (MQ=255)

                                                                                                                                         gTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCa   <  2:494387/140‑1 (MQ=255)

                                                                                                                                         gTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCa   <  1:2708/140‑1 (MQ=255)

                                                                                                                                         gTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCa   <  1:199080/140‑1 (MQ=255)

                                                                                                                                         cTCATCGCCATTGCTCCCCAAAGACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTGTTCGATGAACTCCGGCACGATCTCGTCAAAACTCGCCATGTACTTTTCATCCCGCTCAATCACGACATAATGCAGGCCTTCa   >  2:1312028‑M1/2‑140 (MQ=255)

                                                                                                                                          tCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCAc  >  1:116349/1‑140 (MQ=255)

                                                                                                                                          tCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCAc  >  1:1084877/1‑140 (MQ=255)

TTCTGCGGAAGAGTGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACCCGGATATTATCGTGAGGATGCGTCATCGCCATTGCTCCCCAAATACAAAACCAATTTCAGCCAGTGCCTCGTCCATTTTTTCGATGAACTCCGGCACCATCTCGTCAAAACTCGCCATGTACTTTTCATTCCGCTCAATCACGACATAATGCAGGCCTTCAC  >  NC_000913/565960‑566237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.