| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 915,213 | A→T | 16.7% | intergenic (‑356/+139) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 915,213 | 0 | A | T | 16.7% | 251.4 / 24.4 | 155 | intergenic (‑356/+139) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base A (103/18); new base T (2/28); total (106/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 156 total aligned reads displayed.
CACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAA > NC_000913/915075‑915351 | aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:1716837/1‑140 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:358740/1‑140 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:359590/1‑140 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGAAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:267981/1‑140 (MQ=17) tGGATGTGGGCTGCGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgc < 2:1133034/140‑1 (MQ=17) ggAGGTGGGCTGCGGGCGCTTTTTACAGGGATTTTACCCCGCGCCCGACCCGGTAGCCGTACGGTATACGTCTCGGGAACCGCGCCGCGGCGTTTTTGTTCGCCAGTGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgcc < 2:103459/140‑1 (MQ=11) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGTGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc > 1:1878292/1‑140 (MQ=17) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc > 1:100728/1‑140 (MQ=32) tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc > 2:789374/1‑140 (MQ=32) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg > 2:1361317/1‑140 (MQ=32) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATATTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccccgg > 1:798979/1‑138 (MQ=17) tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cg > 1:1488756/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cgcg > 2:915339/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cgcg > 1:128209/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTg‑cgcg > 1:494645/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCCGCGGCGATTGGCCGCCCCCTg‑cgcg > 2:517548/1‑140 (MQ=17) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 1:95013/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 1:94943/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 1:1897111/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 1:358113/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 2:821374/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCtt > 1:1489332/1‑140 (MQ=32) accgggATGTTACCTCGCGCCCGACCGGGTAGCCTTATGGGATAAGTGGTGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCTGGGGGGGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCa < 2:1829430/137‑1 (MQ=11) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAg > 2:823589/1‑140 (MQ=32) ttGTTACCTCGCGCCCGACCCGGTTGCCTTATGGTATATGTCGTGGGCACCGCGCTGCGGCTTTTTTGTTCGCCAGCGCCGGGGGGTGCTGGGGGGGGGGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCa < 2:1762845/139‑1 (MQ=11) tGTTACCTCGCGCCCGACCCGGTCGCGGTTGGGGCGGGGTCGGGGGCGCCGCGCGGCGGCGTGTGGGTTCGCGAGAGCGCGGGGGTGCGGGGGGCGGCGGCGATTGGCGGCCCGCGG‑CGCGCTCCGTGCGCCGGTGGctg > 2:698840/1‑138 (MQ=2) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGAGAAGGCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCACCCCCTG‑CGCGCTCCTTTCGCCAGTGGCaa > 1:777597/1‑140 (MQ=255) gTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAat > 2:1638678/1‑140 (MQ=37) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAata > 2:78124/1‑140 (MQ=37) ttACCTCGCCCCCTACCGGTTAGCCTTATGGATTATGTCGTGTCCACGGGCCTGCGGGTATTTTTTTCGACTGTGCCGGGGGGTGCTGGGGGCGGGGCCTTTTGGCGGCCCGCTG‑CGCGCTCCTTGCGCCAGTGGCAata < 2:1568514/140‑1 (MQ=2) ttACCACGCGCCCGACCAGGTATCCGTAAGTGATAAGTCGAGGGAACCGCGCAGAGGCGATTATGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTTCAGCCCCCTG‑CGAGATCCTTGCGCCGGAGGCAata > 2:1444305/1‑140 (MQ=11) cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGc > 2:978727/1‑140 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCCGTGGCAATATGTTGCt > 2:1219068/1‑140 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCt > 2:813878/1‑140 (MQ=255) cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt > 1:1736908/1‑140 (MQ=255) ccggACCGGGTTGCCGTAAGGTATATGTCGGGGGCACCGCGCTGGGGCGTTTTTGTTCGCATGCGCCGGGGGGTGCTGGGGGGGGGGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg < 2:1852599/137‑1 (MQ=14) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTc > 2:84069/1‑140 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:726946/1‑140 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCAG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 1:497557/1‑140 (MQ=255) ccGTAATGGATAAGTCGAGGGCACCGCGCAGCGTCGATATTGATCGCAAGAACCCGCGGGTGCAGGGGGAGGAGGCGATTGGCCGCCCCCTG‑CTCCCTCATATCGACATTGGCAATATGTTGCTTAGCTCAAGAAAGGAg > 2:946557/1‑140 (MQ=17) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc > 2:1800491/1‑140 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc > 2:699110/1‑140 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc > 1:743011/1‑140 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCATGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAgcgc > 1:910677/1‑140 (MQ=255) aGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGcaa > 2:224859/1‑140 (MQ=255) gggATACGTGGGGGGCACCGCGCAGGGGCGTTTGTGTTCGCCAGTGCCCGGGGTGGCTGGGGGCGGGGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATCTGTTTCTTAGCTCATGTAAGGAGCGcaac < 2:1484153/140‑1 (MQ=17) aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:1403100/1‑140 (MQ=255) aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg > 2:1344589/1‑140 (MQ=255) tggtgggCACGGCGCAGGGGTTTTTTTGTTCGCCAGAGCCGGGGGGTGCTGGGGGGGGGGGCTTTGGCCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatgat < 2:1226061/136‑1 (MQ=18) aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGaa > 1:670041/1‑140 (MQ=255) aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCGTGCGCCCGTGGCAATATGTTGCGTAGCTCATGAAAGGAGCGCAACAACATGATGaa > 1:1571074/1‑140 (MQ=255) gggCACGGGGCAGGGGCTTTTTTTTCCGCCTGCGCCCGGGGGTGCCGGGGGGGGCGGCTTTGGCCCGCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:416933/140‑1 (MQ=18) gggCACGGCGCCGGGGGGTTTTTGTTCGCCTGAGCCGGGGGGTGCTGGGGGGGGCGGCGTTTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:1544657/140‑1 (MQ=18) gggCACCGGGCAGCGGCTTTTTTGTTCGCCTTAGCCCGGGGGTGCTGGGGGCGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:803836/140‑1 (MQ=18) gggCACCGCGCCGGGGTGTTTTTTTCCGCAAGTCCGGGGGGGGGCTGGGGGGGCCGGGGTTTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 1:1759636/140‑1 (MQ=16) gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCGCCTTGCGCCAGTGGCAATATGTTGCATAGCTCAAGTAAGGAGCGCAACAAGATGATGAAt > 1:238601/1‑140 (MQ=255) gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCGTAGCTCAGGCAAGGAGCGCACCAAGAtgatgaca > 2:946441/1‑138 (MQ=18) ggcccccGCGCTGGGGCTTTTTTGTCCGCCTGCGCGGGGGGGTGGGGGGGGGGGGGGGTTTGGGCCCCCCCCCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 1:1638678/135‑1 (MQ=16) ccGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGTAAGGAGCGCAACAAGATGATGAATCAACa > 1:1788354/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:1580728/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:588812/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:780393/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:589989/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:561006/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCGG‑CGCGCGCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 1:587130/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:560337/1‑140 (MQ=255) cgcgCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGTTTGGCCGCGCCCTG‑CGCGCTCCTTGCGCCCGTGGCGTTATGGTGCGTAGCTCATGTCAGGTGCGCAACAAGGTGATGAAtgatctg > 2:921459/1‑134 (MQ=17) cgcAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat > 2:466353/1‑140 (MQ=255) aGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaac > 2:416107/1‑140 (MQ=255) gggtttttttGTGCGCCAGCGCGGGGGGGTGGGGGGGGGGGGGGCTTTGGCCCGCCCCCGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaa < 1:1322724/134‑1 (MQ=21) atgttGTTCGCCCGAGCCGGGGGGTCCAGGGGGCGGCGGCGCTTGGCCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATCTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACCTATAACAACATCt < 2:1691534/137‑1 (MQ=25) aTTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCt > 2:771332/1‑140 (MQ=255) ccacaccccGGGGGTCCCGGGGCCGGCGCCTATCGCCCCCCCCCCC‑CGCGCTCCTTGCGCCAGTGCCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACAAATAACAACATCTTAAAAAAAgg < 2:1533414/134‑1 (MQ=25) tgcgcggggggggGCTGGGGGGGGGGGCTTTTGGCCCCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:737413/133‑1 (MQ=37) tgcgcgggggggTGCGGGGGGGGGGGGTTTTGGGCCCCCCCCGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:1125822/133‑1 (MQ=37) cgcgcggggggggGCGGGGGGGGGGGGCTCTGGGCCCCCCCCCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:88589/133‑1 (MQ=37) cgcgCCGGGGGGTGCTGGGGGCGGGGGCTTTTGGCCCCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:688534/137‑1 (MQ=37) accgCCCGGGGGTCCCGGGGCCGCCGCCCATGGCCCCCCCCAGG‑CGCGCTCCATGCGCCAGTGGCAATATGTTGCTTAGCACATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACACCAACTTAAAAAAAGGcc < 2:330945/137‑1 (MQ=255) gtgcgggggggTGCTGGGGGGGGGGGGTTTTGGCCGCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt < 1:915265/134‑1 (MQ=37) gcgggggggggTGCTGGGGGGGGGGGGGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt < 1:915339/134‑1 (MQ=37) cggggggTGCTGGGGGGGGCGGCGTTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 1:962684/138‑1 (MQ=255) cggggggTGCGGGGGGGGGGGGGTTTTGGCCCCCCCTGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 1:1491421/138‑1 (MQ=37) gtcggccgggggCCGCTGCCACTCGCCCCCACCTC‑CGCCCTCCTTGCTCCAGAGGCTCGATTATGCGTATCTCAATACAGCACCGCAACAACCTGAAGAAACAACAAATAACAACCTCTTAAAAAAAGGCCTGACATCAc < 2:1922323/133‑1 (MQ=255) gggTGCTGGGGGGGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTAc < 2:792458/140‑1 (MQ=255) gggggggggggggggGCGTTGGGCCGCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc < 1:1607590/135‑1 (MQ=255) gtgcggggggggggggGTTTGGGCCCCCCCGGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc < 1:1493060/136‑1 (MQ=255) cAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg > 2:277558/1‑140 (MQ=255) cAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg > 2:1058634/1‑140 (MQ=255) cAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGGGGCAATATGTTGCTTAGCTCAGGAAAGGAGCGCAACAAGATGATGAATCGACAAATAACAACATCTTACAAAAAGGCCTGTCAGTACGcccg > 2:465161/1‑138 (MQ=37) gggggcggcgTTTGGCCGCCCCCCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTGGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt < 1:706859/137‑1 (MQ=38) ggcggcggcGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt > 2:746525/1‑140 (MQ=255) ggcggcggcGAATGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCACATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCATAAAAAAAGGCCTGACATTACGCCAGGCCtt > 2:86935/1‑140 (MQ=255) cggcggcgATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt > 1:434059/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 2:1009386/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:611855/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:512564/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGGTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:514278/1‑140 (MQ=255) cggctATGGGCCGCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg < 1:776852/140‑1 (MQ=255) cggcgTTTGGCCCCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg < 1:1658320/140‑1 (MQ=255) taTTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaa < 2:910677/139‑1 (MQ=255) | CACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAA > NC_000913/915075‑915351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |