| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,859,142 | G→A | 90.1% | A684T (GCC→ACC) | mutS → | methyl‑directed mismatch repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,859,142 | 0 | G | A | 90.1% | 291.7 / 21.5 | 101 | A684T (GCC→ACC) | mutS | methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base G (4/6); new base A (37/54); total (41/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.17e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCTATGTACCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCACTA > NC_000913/2859005‑2859278 | gCTATGTACCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACAcc > 1:1845118/1‑140 (MQ=255) aCCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAAt < 2:750245/140‑1 (MQ=255) ccGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATa < 2:768661/140‑1 (MQ=255) ccGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATa < 1:588065/140‑1 (MQ=255) acGGCACAAAATGTCGAGATTGGACCTATCGATCTCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAAAACCACCGAATa < 1:588162/139‑1 (MQ=255) ggCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACa < 1:1795457/140‑1 (MQ=255) gCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAg > 2:896123/1‑140 (MQ=255) gCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAg > 1:500450/1‑140 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCTCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGTGGTCTGAAACCGCCAATTTTTTACATAACACCACCGAATACAGt > 1:1497712/1‑140 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGt < 2:456512/140‑1 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGt < 2:882711/140‑1 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGt > 1:1561973/1‑140 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGt > 1:1561964/1‑140 (MQ=255) cacaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGt > 1:1561948/1‑140 (MQ=255) acaAAACGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTc < 2:738542/140‑1 (MQ=255) acaAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTc < 2:97001/140‑1 (MQ=255) aaaGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGgt < 1:539668/140‑1 (MQ=255) aGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGgtgt < 2:896723/140‑1 (MQ=255) tCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTa > 1:929527/1‑140 (MQ=255) aTTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGa < 1:38331/140‑1 (MQ=255) ttGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGAt < 2:739282/140‑1 (MQ=255) ccTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGAt < 2:1120579/140‑1 (MQ=255) atcgatcgCATCTTTACCCGCGTTGGCGCGGCAGATGACCTTGCGTCCGGGAGCTCAAGCATTTTGGTGGAGATGTCTGATACCGCCAATTTTTTACATAACACATCCGAATACAGTCTGGTGTTAAGGGTTGCTATCgg > 2:1897045/1‑140 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGTTGTCCTGGCGTCCGGGCGCTCAACCTTTAGGGTGGAGATGACTGAAACCGCGACTATTTTACATAACACCAACGAATACAGTCTGGTGTTAAAGGATGAGATCgg > 2:554092/1‑140 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGCTGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTGTACATACCGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCgg < 1:1192038/140‑1 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCgg > 1:1457789/1‑140 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCgg < 1:1841785/140‑1 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCgg > 1:1457764/1‑140 (MQ=255) atcgatcgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCgg > 1:648409/1‑140 (MQ=255) tcgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTg > 2:1265819/1‑140 (MQ=255) acgCAACATTACCCGCGTAGCCCCGCCAGATGACCAGGCGTCCGGGCGCTCAACCAATATCCGGCAGAAGACAGAAACCGCCCATAAAAAACATAACACCACCGAATACACACTGGTCTTAAAGGATCAGAAcgcgcgag > 2:185545/2‑138 (MQ=255) cgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATACCGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTgg > 1:198092/1‑140 (MQ=255) cgCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTgg > 1:1315897/1‑140 (MQ=255) gCATCTTTACCCGCGTAGGCGCGGCAGTTGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGTTGACTGAAACCGCCAATATTTTACATAACACCACCGTATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGa < 2:925417/140‑1 (MQ=255) gCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTATGGTGTTAATGGATGAGATCGGGCGTGGa < 2:334841/140‑1 (MQ=255) tCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACg < 1:1759134/140‑1 (MQ=255) cTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGt < 2:888466/140‑1 (MQ=255) ttACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTCTTGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCTCCGAAGACCCTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGtac < 2:1653587/140‑3 (MQ=255) tACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCa > 1:185924/1‑140 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc > 1:555597/1‑140 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc > 1:555443/1‑140 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc > 1:1381853/1‑140 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc < 2:639177/140‑1 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc < 1:727183/140‑1 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc < 2:32867/140‑1 (MQ=255) aCCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCAc > 1:555604/1‑140 (MQ=255) gcgTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTAc > 2:733840/1‑140 (MQ=255) cgTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTTAGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGACCGTCCACCTACg < 2:914418/140‑1 (MQ=255) gTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGa > 1:109852/1‑140 (MQ=255) gTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAAGATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGa < 2:1270002/140‑1 (MQ=255) gTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTAGGGTGGAGATGACTGAAACCGCCAATATTTTACATAAGACCCCCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGa < 2:18759/140‑1 (MQ=255) gTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTAAGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTATGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGa > 1:1175914/1‑140 (MQ=255) ggCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATgg > 1:299772/1‑140 (MQ=255) cgcgGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTc < 1:851530/140‑1 (MQ=255) cgcgGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTc < 2:1852443/140‑1 (MQ=255) gCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTc < 1:1072077/140‑1 (MQ=255) gCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTc < 1:1072489/140‑1 (MQ=255) gCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTc < 1:73472/140‑1 (MQ=255) gCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTc < 2:1062849/140‑1 (MQ=255) cAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCg < 1:1634411/140‑1 (MQ=255) aGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGc < 2:1728967/140‑1 (MQ=255) gTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTggcgtgggcgt > 1:1574854/1‑140 (MQ=255) tCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTggcgtgggcgtg < 2:1873565/140‑1 (MQ=255) cGGGCGCTCAACCTTTATGGTGGAGATGACTGTAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGAAGAGTTCGGGCGTGGAACGTCCACCTACGATGGTATGTCGCTGGCGTGGGAGTgcg > 2:1888867/1‑140 (MQ=255) cGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTgcg > 2:1239829/1‑140 (MQ=255) cGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTgcg > 1:1227895/1‑140 (MQ=255) cGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTgcg > 1:337474/1‑140 (MQ=255) cGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTgcg > 1:158607/1‑140 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 2:771016/140‑1 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 2:706850/140‑1 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 2:706591/140‑1 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 1:267571/140‑1 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 2:769612/140‑1 (MQ=255) aTGGTGGAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGaa < 2:770783/140‑1 (MQ=255) tggtggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGTGTGGGCGTGCGCGGAAAATCTGGCGAAt < 1:787016/140‑1 (MQ=255) tggtggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAAt < 2:312283/140‑1 (MQ=255) tggtggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAAt < 1:1293060/140‑1 (MQ=255) tggtggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAAt < 1:1290304/140‑1 (MQ=255) tggtggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAAt < 2:1500075/140‑1 (MQ=255) ggtggAGATGACTGAAACCGCCAATATTGTACATACCACCACCGCATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCAACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATa < 1:1113004/140‑1 (MQ=255) ggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGa > 1:172210/1‑140 (MQ=255) ggAGATGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGa > 2:55259/1‑140 (MQ=255) gagaTGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGAt > 2:1466673/1‑140 (MQ=255) gagaTGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGAt > 1:702759/1‑140 (MQ=255) gagaTGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGAt > 2:1004967/1‑140 (MQ=255) gagaTGACTGAAACCGCCAATATTTTACAAAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGACCACCTACGATGCTCTGTCGCTGGCGAGGGCGAGCGCGGAAAATCTCGCCAATAAGAt > 2:1912939/1‑140 (MQ=255) gaTGACTGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTa < 1:1813141/140‑1 (MQ=255) tGAAACCGCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCAt > 2:75786/1‑140 (MQ=255) aaaCCGCCAATATTTTACATAACACAACCGAATACAGTCAGGGTTAAAAGGATGAGATCGGGCGTGTAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCTAATAAGATTAAGGCAATg > 1:1837988/1‑140 (MQ=255) gCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGtt < 2:551692/140‑1 (MQ=255) gCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGtt < 2:551636/140‑1 (MQ=255) gCCAATATTTTACATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGtt < 2:918964/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTTATAATGGAAGACATCGGTCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAAACTGGCGAATAACATTAACGCATTGACGTTATTTGCTACCCa < 2:322852/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCTCCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAATATTAAGGCATTGACGTTATTTGATACCCa < 1:1013201/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTCCGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAACTCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCa < 1:939868/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCa < 2:310532/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCa < 2:311953/140‑1 (MQ=255) cATAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCa < 2:1799513/140‑1 (MQ=255) aaTAACACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAACGCATTGACGTTATTTGCTACCCa < 2:322705/139‑1 (MQ=255) aaCACCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCACTa > 2:1824771/1‑140 (MQ=255) | GCTATGTACCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCACTA > NC_000913/2859005‑2859278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |