Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,068,506 G→T 6.7% A101A (GCC→GCA argO ← arginine transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,068,5060GT 6.7% 225.2 / 2.9 67A101A (GCC→GCAargOarginine transporter
Reads supporting (aligned to +/- strand):  ref base G (29/33);  new base T (3/2);  total (32/35)
Fisher's exact test for biased strand distribution p-value = 6.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGCGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAAC  >  NC_000913/3068370‑3068629
                                                                                                                                        |                                                                                                                           
cgCGTTTTGGTTCCCCATCACGTTGCCCGCCAAGGCTGCCCAGTCCCACCAAAGTATCCAGGTCACGATCGGGTTTCCGCCAGGTCTCTGCCAACATGGTGGCGATACGTTTCCATCTGCCTTGCTTCCTGACTTCGgcg                                                                                                                          <  2:1594965/139‑1 (MQ=255)
aGCGTTGTGGTTCCACATCAAGTTGCCCGCGAAGGCTGCCCAGTACAACAAAAGTATCCAGGTACCCATGCGGATTCAGCCAGGTCACTGCCAACAGGGTGGCGATAAATTTCCCTCTGCCTTGCTTCATGACTTCGgcg                                                                                                                          <  2:1594976/140‑1 (MQ=255)
  cGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCt                                                                                                                        >  1:30335/1‑140 (MQ=255)
     tttGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGc                                                                                                                     <  2:612003/140‑1 (MQ=255)
     tttGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGc                                                                                                                     <  2:611926/140‑1 (MQ=255)
     tttGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGc                                                                                                                     <  2:30335/140‑1 (MQ=255)
     ttaggTTCCACTTCAAGGTGCCCGCCAAGGCTGCCCTGTACTACAAATGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGTTAATTTTCCTTCTGCCTTGCTTCATGACTTCGGCGCTGGc                                                                                                                     <  2:1801004/137‑1 (MQ=255)
     ttaggTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTCCAACAAAAGTATCCTGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGc                                                                                                                     <  2:842335/137‑1 (MQ=255)
      ttGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCt                                                                                                                    <  2:1034623/140‑1 (MQ=255)
       tGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGTCTTCTGCGCTGGCTa                                                                                                                   >  2:1890149/1‑140 (MQ=255)
       tGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCTGCGCTGGCTa                                                                                                                   >  2:836606/1‑140 (MQ=255)
         gTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCGAAc                                                                                                                 >  2:1175828/1‑140 (MQ=255)
          ttCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATTACTTCGGCGCTGGCTAACt                                                                                                                <  2:1593156/140‑1 (MQ=255)
             cacaTCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCTGCGCTGGCTAACTCaa                                                                                                             <  1:836606/140‑1 (MQ=255)
             cacaTCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCTGCGCTGGCTAACTCaa                                                                                                             <  1:1890149/140‑1 (MQ=255)
             cacaTCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCaa                                                                                                             <  1:1190333/140‑1 (MQ=255)
             cacaTCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCaa                                                                                                             <  2:359667/140‑1 (MQ=255)
                    aGTTGCCCGCCAAGGCTGCCAAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGTCGCTGGCTAACTCAATATTaat                                                                                                      >  1:39070/1‑138 (MQ=255)
                             ccAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGc                                                                                             <  1:763673/140‑1 (MQ=255)
                              cAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCt                                                                                            <  2:1818300/140‑1 (MQ=255)
                                      cccAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACTTGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACGACTGCGCTGGCTCACTCAATATTACTGCTCATTGCTGTTTGaaa                                                                                    >  2:30292/1‑140 (MQ=255)
                                      cccAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTACATGACTTCGGCGCTGGCTAACTCAATAGTACTGCTCATTGCTGTTGTaaa                                                                                    >  2:30211/1‑140 (MQ=255)
                                            acaacaAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGcc                                                                              <  1:1886989/140‑1 (MQ=255)
                                                caaAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCaaaa                                                                          >  1:1886791/1‑140 (MQ=255)
                                                   aaGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCGGCCTTGCTTCTTGAGTTCGGCGCTGGCTAACTCAATCTTCCTGCTCATTGCTGTTTTATACGCGCCAGTACCa                                                                       >  2:1494682/1‑140 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCCACATGGACGCGATAATTTTCCATCTCCCTTGCTTCATGACTTCGGCGCTGGATAACTCAATATTACTGCTCATTGCTGTGATAAAAGCGACAAAACCaaa                                                                     >  2:1581821/1‑138 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATa                                                                     >  1:76644/1‑140 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATa                                                                     >  1:902322/1‑140 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATa                                                                     >  1:1913199/1‑140 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATa                                                                     >  2:525326/1‑140 (MQ=255)
                                                     gTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATa                                                                     >  2:525479/1‑140 (MQ=255)
                                                             gTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTGTTAAAAGCGCCAAAACCATACCACAGCa                                                             >  2:353779/1‑140 (MQ=255)
                                                              tAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCaa                                                            <  2:1373708/140‑1 (MQ=255)
                                                               aaccATGCGGATTCAGCAAGGTCACTGCCAACATGGTGGCGATTATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCaag                                                           <  2:699760/137‑1 (MQ=255)
                                                               aaaCATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCaag                                                           <  2:324364/140‑1 (MQ=255)
                                                                aaCATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTCACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCaaga                                                          >  2:1217656/1‑140 (MQ=255)
                                                                aaCATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCaaga                                                          >  2:1217673/1‑140 (MQ=255)
                                                                      cGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTaa                                                                                                                  <  1:425052/78‑1 (MQ=255)
                                                                      cGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTaa                                                                                                                  >  2:425052/1‑78 (MQ=255)
                                                                      cGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTa                                                    >  2:222919/1‑140 (MQ=255)
                                                                      cGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTa                                                    >  2:1698320/1‑140 (MQ=255)
                                                                       ggATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAc                                                   <  1:1605756/140‑1 (MQ=255)
                                                                       ggATTCACCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAc                                                   <  2:1759229/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACCGCAAGAAGGCTAcgccgc                                              <  1:1665720/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAcgccgc                                              <  2:315961/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAcgccgc                                              <  2:1788170/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAcgccgc                                              <  1:1522514/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAcgccgc                                              <  1:1364182/140‑1 (MQ=255)
                                                                            cAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTAcgccgc                                              <  1:1363244/140‑1 (MQ=255)
                                                                             aGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACgccgcc                                             >  1:364546/1‑140 (MQ=255)
                                                                                   gTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGt                                       >  1:1525781/1‑140 (MQ=255)
                                                                                   gTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGt                                       >  2:892742/1‑140 (MQ=255)
                                                                                        tGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCa                                  >  2:1096827/1‑140 (MQ=255)
                                                                                             aCATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGcc                             >  2:103500/1‑140 (MQ=255)
                                                                                               aTGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAg                           <  1:463358/140‑1 (MQ=255)
                                                                                               aTGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAg                           <  1:768334/140‑1 (MQ=255)
                                                                                               aTGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAg                           <  1:919843/140‑1 (MQ=255)
                                                                                                  gtggCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCaa                        >  1:165325/1‑140 (MQ=255)
                                                                                                    ggCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAAcc                      >  1:210819/1‑140 (MQ=255)
                                                                                                       gATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACg                   <  2:512469/140‑1 (MQ=255)
                                                                                                            ctttCCAACTGCCTTCCTTCCTGACTACGGACCTCGCTAACTCAAAATTACTTCTCATTGCTGTTTAAAAAGCGCCAAAACCAAACCACAGCAAGAAGGCTACGCCGCCACAGGTGACCAGCGCCAGCAACCACGGCGAc              <  2:1462616/139‑1 (MQ=255)
                                                                                                               tCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGc           <  2:203912/140‑1 (MQ=255)
                                                                                                               tCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGc           >  2:1041426/1‑140 (MQ=255)
                                                                                                               tCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGc           >  2:804729/1‑140 (MQ=255)
                                                                                                                 cATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCAt         <  1:1058222/140‑1 (MQ=255)
                                                                                                                       ccTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATaa   >  1:1867447/1‑140 (MQ=255)
                                                                                                                        cTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAAc  >  2:1441075/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                           
AGCGTTTTGGTTCCACATCAAGTTGCCCGCCAAGGCTGCCCAGTACAACAAAAGTATCCAGGTAAACATGCGGATTCAGCCAGGTCACTGCCAACATGGTGGCGATAATTTTCCATCTGCCTTGCTTCATGACTTCGGCGCTGGCTAACTCAATATTACTGCTCATTGCTGTTTTAAAAGCGCCAAAACCATACCACAGCAAGAAGGCTACGCCGCCCCAGGTGACCAGCGCCAGCAACCACGGCGACTGCATCAATAAC  >  NC_000913/3068370‑3068629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: