| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,504,861 | T→A | 15.6% | intergenic (+78/+74) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,861 | 0 | T | A | 15.6% | 583.6 / 15.6 | 300 | intergenic (+78/+74) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (45/180); new base A (55/2); total (118/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-28 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 330 total aligned reads displayed.
TCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGG > NC_000913/3504722‑3504998 | tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCt < 1:1678186/140‑1 (MQ=255)tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCt < 1:1791415/140‑1 (MQ=255)tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCt < 2:1739767/140‑1 (MQ=255)tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCt < 1:39486/140‑1 (MQ=255)tctaCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGAGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCACt < 2:1397113/140‑1 (MQ=255)gctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCt < 1:1218660/139‑1 (MQ=255) ctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTc > 2:1502857/1‑140 (MQ=255) tcCGAACTCTTCTGTCGCGCCAATCGCATCACCTTATCTATTGATAATAAAAGACATTAACCGTAGGCCGGTTAAGATGCGCAAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCa < 2:1238335/140‑1 (MQ=255) taCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCt < 2:593689/139‑1 (MQ=255) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCaaaa > 2:618347/1‑139 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAAcc < 1:1647320/140‑1 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAAccc > 2:1847346/1‑140 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCct < 1:226550/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCct < 1:1817371/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCct < 2:1339779/140‑1 (MQ=255) tGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCctc‑t < 2:1678434/140‑1 (MQ=255) tGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCctc‑t < 2:395623/140‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCAC‑TCCCCa > 2:1016558/1‑140 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCGAACCCAC‑TACCCa > 1:662413/1‑140 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAACCCTC‑TCCCCa > 2:473963/1‑140 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCGAACCCAC‑TCCCCa > 1:1832147/1‑140 (MQ=255) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAgg < 2:550790/140‑1 (MQ=255) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAACCCTC‑TCCCCACAgg < 2:1777477/140‑1 (MQ=255) aCCTAAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGACAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACACTAACCCTA‑TACCCAAAGGGGCgggggg > 2:1135784/1‑140 (MQ=38) ccTTCACTATTGATACTAAAAGACCTTAACCGTAGGCCGGATAAGACGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAACGGGGCGAGGGGa < 1:58583/140‑1 (MQ=38) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 2:192330/140‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 1:596514/140‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 1:822399/140‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 1:424575/140‑1 (MQ=255) ccTTAACAAATGATAATAAAAGACATTAACCCTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGAAGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAACGGGCGAGGGGa < 1:856865/140‑1 (MQ=38) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACACCCAAACCCAC‑ACCCCAAAGGGGCCAGGGGAccc > 2:408159/1‑139 (MQ=38) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAAACCAC‑TCCCCAAAAGGGCGATGGGACCg > 1:736653/1‑140 (MQ=38) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 2:944310/140‑1 (MQ=255) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 1:461080/140‑1 (MQ=255) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 2:420363/140‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAACCCTC‑AACCCAAAGGGGCGAGGGGACCGTTCAGt > 2:1830916/1‑140 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTa < 2:255020/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:1339129/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 2:1167533/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATACGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAACAAAACCCTA‑ACCCCAAAGGGGCGCGGGGACCGTGAAGTa > 2:505249/1‑140 (MQ=38) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCGCACCCAAAACCAC‑ACCCCAAAGGGGCGAGGGGACCCGTCAGTaa > 1:1270901/1‑139 (MQ=38) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCAAACCCAAAACCACAACCCCAAAGGGGGAGGGGGACCGtgaaaac > 1:1205276/1‑134 (MQ=25) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAACCAAACCCTC‑AACCCCAAGGGGCGAGGGGACCGTTCAGTAc > 2:440056/1‑140 (MQ=39) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTAc > 2:1797334/1‑140 (MQ=255) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCTAACCCTC‑TACCCAAAGGGGCGAGGGGACCGTTCAGTAc > 2:1424659/1‑140 (MQ=255) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACAACCGAAACCAA‑TACCCAAAGGGGCGAGGGGGCCGttaaataa > 1:1016358/1‑134 (MQ=37) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTAACCACACCCTAAACCAA‑AACCCAAAGGGGCGAGGGGGCCCttaaataa > 1:1191925/1‑134 (MQ=37) aataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCTAAACCAC‑AACCCCAAGGGGCGAGGGGGCCGGTCAGTACGGa > 1:710924/1‑140 (MQ=37) ataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGaa < 1:1007304/140‑1 (MQ=255) ataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGaa < 1:362967/140‑1 (MQ=255) aaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCCCCCAAACCCTC‑TCCCCAAAGGGGCCAGGGGACCGGTCAGTAAGGAATTTa > 2:244239/1‑140 (MQ=39) aTTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGGGAGGGGTCCGTTCAGTACGGAATTTATCTTg > 2:38791/1‑140 (MQ=255) ttACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGACTTTTACCTCCCGTACGTTCCCTTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:1607156/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCTTCGCATCCGGCGAAGCTGGCGCGTTGAATTTTTCAACCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGCGGACCGTTCAGTACGGAATTTAGCTTGa < 2:353058/140‑1 (MQ=38) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:1652221/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:1463560/140‑1 (MQ=255) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGAc < 1:1725518/140‑1 (MQ=255) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCAAAACCAC‑AACCCAAAGGGGCGAGGGGACCCTTCACTACGGAATTTAGCATGAc > 2:658983/1‑140 (MQ=37) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAACCCTC‑TCCCCAAATGGGCGAGGGGACCGTTCAGTACGGAAATTAGCTTGAc > 2:715164/1‑140 (MQ=255) aaCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCGAACCCAC‑ACCCCAAAGGGGCGCGGGGACCGTTCCGTACGGAATTTAGCTTGACg > 1:1766672/1‑140 (MQ=38) aCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACgg < 2:927178/140‑1 (MQ=255) cggaGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTg < 1:1069448/137‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACCCCCCAACCCAC‑ACCCCAAAGGGGCGAGGGGCCCCGTCAGTACCGGAAATAGCTTGACCGTGCt > 1:1434279/1‑140 (MQ=37) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAAACCGC‑ACCCCCAAAGGGGGAGGGGGCCGGTAAGTACCGAAATTATCGTGAAGGTGCt > 1:279408/1‑140 (MQ=21) gCCGGATAAGATGCGCCAGCCTCGCATCCGGCGATGCTGGCGCGTTGAATTATACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:1921449/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGATTTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 2:1188807/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACCTCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 2:282328/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:1414261/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:1545028/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:319453/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATATTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 2:128800/140‑1 (MQ=255) cGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCa < 2:791515/140‑1 (MQ=255) cGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACCTCCCGTCCGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCa < 1:300492/140‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCAC‑TACCCAAAGGGGCGAGGGGACCGTTCAGTAAGGAAATTAGCTTGACCGTGATAACCaac > 2:21238/1‑138 (MQ=38) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAACCCGC‑TCCCCAAAGGGGCGAGGGGACCGGTCAGTAAGGAATTTAGCTTTGCGGTGCTATACACCa > 2:186298/1‑140 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAt < 1:670444/140‑1 (MQ=255) cgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 1:800551/140‑1 (MQ=255) gcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑T‑CCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg > 1:130774/1‑140 (MQ=255) ccAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAATTAGCTTGACGGTGCTATCCAGCATTAAATACTg > 2:1733664/1‑140 (MQ=255) cAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:753909/140‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCa < 1:1512154/140‑1 (MQ=255) tcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:1152909/140‑1 (MQ=255) tcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCGAACCCGC‑TCCCCCAAGGGGCGAGGGGACCGGTCAGTACGGAAATTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa > 2:899514/1‑140 (MQ=255) gCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAGCCTAACCCTA‑TGCCCAAAGGGGCGATGGGTACGTTCAGTACGGAATTTAGGGTGACGGTGCTATGCAGCATTAAAATGTGGCAATACTCTAACgg > 2:1592315/1‑139 (MQ=255) aTGCTGGCGCGTTGAATTTTACGTCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaa < 2:824289/140‑1 (MQ=255) aTGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaa < 1:80914/140‑1 (MQ=255) aTGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCaaa < 1:4683/140‑1 (MQ=255) ttGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCa > 2:316789/1‑47 (MQ=255) ttGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTGACGCAAAATCCGCAGCAc < 1:939980/140‑1 (MQ=255) gAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCg < 2:381343/140‑1 (MQ=255) aaTTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGt < 1:450144/140‑1 (MQ=255) tACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCtt < 2:1440243/140‑1 (MQ=255) tACATCCCGTACGTTAACCACACCCTAACCCTC‑TCCCCAAACGGGCGAGGGGAACCTTCAGAACCGAAAATAGCTTGACGGTGCAAACCACCATTAAAAAAAGGCAAAAAACTCACGCAAAAACCCCACCACCGtcaaat > 2:163103/1‑136 (MQ=255) aTCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTATCTTGACGGTGCTATCCAGCATTAAATACTGGCTATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAc < 1:956892/140‑1 (MQ=255) aTCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAc < 1:1377514/140‑1 (MQ=255) cGTACGTTCCCCACACCCTAACCCAC‑ACCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAAAATTGCAATACTCTCACGCAAAATACGCAGCACCGTCTCATAACCGCt > 2:872466/1‑140 (MQ=37) gTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGAt < 1:620898/140‑1 (MQ=255) ttCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTGGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGAtt < 2:761160/140‑1 (MQ=255) ccccTCACCCTAAACCAC‑TCCCCAAAGGGGCGATGGGACCGTTCACTACGGAATTTATGTTTACGGTGCTATCCACCATTAAATAAAGGCAATAATCTAACGCAAAATCCGCAGCACCCACTCTTCACCCCAGCGAttag > 2:1523643/1‑138 (MQ=255) cccTCACCCAAAACCTC‑ACCCCAAATGGGCGATGGGACCGTTAAGTACGGAATTTAGCTTGACGGTGCTATACAGCATTAAATAAAGGCAAAACACTAACGCAAAAAACGCAGCACCGTCACTTAAACGCTGCGATTAgg > 2:602970/1‑140 (MQ=255) | TCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGG > NC_000913/3504722‑3504998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |