| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,909,566 | G→A | 6.0% | A278V (GCG→GTG) | pstC ← | phosphate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,909,566 | 0 | G | A | 6.0% | 348.6 / 8.9 | 101 | A278V (GCG→GTG) | pstC | phosphate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (37/57); new base A (3/3); total (41/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
ATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCAT > NC_000913/3909432‑3909705 | aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgcttcc > 2:680585/1‑140 (MQ=255)aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgcttcc > 2:1556353/1‑140 (MQ=255)aTAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGAAGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGAttccgcttcc > 2:1054401/1‑140 (MQ=255) aTTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAt > 1:951612/1‑140 (MQ=255) tAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttc > 1:1858171/1‑140 (MQ=255) tAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttc > 1:1343013/1‑140 (MQ=255) aGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcg > 2:1037804/1‑140 (MQ=255) aGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcg < 2:1836649/140‑1 (MQ=255) aGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcg < 2:1837261/140‑1 (MQ=255) gTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAAttcgttc > 1:842206/1‑140 (MQ=255) tGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCACTTCCGCAAAttcgttcg > 1:868607/1‑140 (MQ=255) tGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCACTTCCGCAAAttcgttcg > 1:868574/1‑140 (MQ=255) tGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAAGCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCACTTCCGCAAAttcgttcg > 1:917140/1‑140 (MQ=255) gCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGc < 2:1142028/140‑1 (MQ=255) gCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGc < 1:922527/140‑1 (MQ=255) gCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGc < 1:1185849/140‑1 (MQ=255) cccccTCATTCTTAGCCAGGCGCATAATCCTAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCACCGTGCAGACCGGATTCCTCGACCGCAAATTCGTTCGcc > 2:340989/1‑140 (MQ=255) ccccTCTTTCTTAGCCAGGCGCTTAATCTTAAACTTCGATGCTGCGAGGACGATGAAGGTAATCAGATACAGGATCAGGCCCAGTTCCATCAGTGCGGCATCGTGCTGACCGGATTCCGCTTCCGCAAATTCGTTCGCCa < 2:232110/140‑1 (MQ=255) tCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAgcgc < 1:1759175/140‑1 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCag < 1:1820108/140‑1 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCag < 1:1666973/140‑1 (MQ=255) aTTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCag < 1:1820604/140‑1 (MQ=255) ttCTTAGCCAGGCGCATAATCATATACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCaga < 2:1104403/140‑1 (MQ=255) ttCTTAGCCAGGCGAATAATCATCAACTTCGATGCCGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAATTTCGTTCGCCAGCGCaga < 2:781198/140‑1 (MQ=255) ttAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGt > 1:207871/1‑140 (MQ=255) tgaGCCAGGCGCATAATCATAAACCTCGCTGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGt < 1:1114511/138‑1 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTg < 1:1163634/140‑1 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTg < 1:1163878/140‑1 (MQ=255) tAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTg < 1:383497/140‑1 (MQ=255) aGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGa > 1:1722589/1‑140 (MQ=255) aGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGa < 1:1248884/140‑1 (MQ=255) ggCGCATCATCAAAAACTTCGCTGCGGCGAGGTCGATGAAGGTAATCACAAAGAGGATCAGGCCCTGTTCCATCAGTGCGGCTACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTg < 2:773440/140‑1 (MQ=255) ggCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCTGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTg < 2:772235/140‑1 (MQ=255) gcgcATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGt > 1:1517397/1‑140 (MQ=255) gcgcATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGt > 1:865894/1‑140 (MQ=255) gcgcATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGt > 2:191221/1‑140 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTATTCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:984381/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:1650006/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:1126284/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:1507258/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:250301/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 2:1625260/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:957482/140‑1 (MQ=255) cATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGc < 1:1317513/140‑1 (MQ=255) aaTCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCg < 2:1383758/140‑1 (MQ=255) aTAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCat < 1:1462586/140‑1 (MQ=255) aCTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATAc > 2:38887/1‑140 (MQ=255) ttCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCTCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAg > 1:1163321/1‑140 (MQ=255) ttCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAg > 1:125001/1‑140 (MQ=255) ttCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAg > 1:778784/1‑140 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCg > 2:950640/1‑140 (MQ=255) cGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCg > 1:505752/1‑140 (MQ=255) gcgAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCt > 1:1744448/1‑140 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:951877/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:1702432/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:1916697/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:611037/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:210441/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 2:211191/140‑1 (MQ=255) aCGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTCCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAg < 1:411187/140‑1 (MQ=255) tGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTgg > 2:1338785/1‑140 (MQ=255) gcaGGTAATCACACACAGTATCAGGCCCAGTTCCATCAGTGCGGAAACGTGCAGACCGGATTCCGCTTCCGCAAATTAGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGt < 2:574629/138‑1 (MQ=255) gAAGGTAATCACCAACAGGACCAGGCACAGTTCCATCAGAGCCGCAACGTTCAGACCTGATTCAGCTTCCGCTAATTCGTTCGCCTGATCAGATGTGATACTGTTGCCCGGCATATACAGCGAGGCGATGTCGAGCTTGt < 2:574672/140‑1 (MQ=255) gAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGt < 2:1181558/140‑1 (MQ=255) gAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGt > 1:1834252/1‑140 (MQ=255) acaAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAcc < 1:1054401/140‑1 (MQ=255) acaAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTAcc < 2:194005/140‑1 (MQ=255) aCAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCgatg > 1:411223/1‑140 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATaa < 2:1458267/140‑1 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATaa > 2:581015/1‑140 (MQ=255) gATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATaa > 2:143437/1‑140 (MQ=255) aTCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTACCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCGGGGAGGGGTTACCGAGGATaca > 2:1207696/1‑138 (MQ=255) aGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGt < 1:879300/140‑1 (MQ=255) aGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGc < 1:619692/140‑1 (MQ=255) aGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGc > 1:1631911/1‑140 (MQ=255) ttCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCTAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:1643718/140‑1 (MQ=255) ttCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:1286715/140‑1 (MQ=255) ttCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:90246/140‑1 (MQ=255) ttCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 1:1166027/140‑1 (MQ=255) ttCCATCAGTGCGGCAAAGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCa < 2:1598237/140‑1 (MQ=255) aTCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGt > 1:1579590/1‑140 (MQ=255) tCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGtt > 1:1824224/1‑140 (MQ=255) tGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCAc > 1:1091205/1‑140 (MQ=255) cGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgcg < 2:730103/140‑1 (MQ=255) gTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgcgc < 1:626592/140‑1 (MQ=255) gTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgcgc < 1:627046/140‑1 (MQ=255) gTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAgcgcgc < 1:1461037/140‑1 (MQ=255) tGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg > 1:9275/1‑140 (MQ=255) tGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg > 1:75903/1‑140 (MQ=255) tGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGcgcgcg > 2:481484/1‑140 (MQ=255) cgACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 1:110008/139‑1 (MQ=255) cgACCGGATTCCGCTACCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 1:1896670/139‑1 (MQ=255) aGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 1:1319315/140‑1 (MQ=255) aGACCGGATTCCACTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 2:868574/140‑1 (MQ=255) aGACCGGATTCCACTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 2:868607/140‑1 (MQ=255) aGACCGGATTCCACTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcc < 2:917140/140‑1 (MQ=255) gATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGcccagccc > 2:178218/1‑140 (MQ=255) gATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGAGATACTGTTGCCCGGCATATACAGCGAGCCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACAGAGCGCGCGGcccagccc > 2:178197/1‑140 (MQ=255) gcttccgcAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCat > 1:1303026/1‑140 (MQ=255) gcttccgcAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCat > 1:1302970/1‑140 (MQ=255) | ATAGCCATTAGCGTGCCCCCTCATTCTTAGCCAGGCGCATAATCATAAACTTCGATGCGGCGAGGACGATGAAGGTAATCACAAACAGGATCAGGCCCAGTTCCATCAGTGCGGCAACGTGCAGACCGGATTCCGCTTCCGCAAATTCGTTCGCCAGCGCAGAGGTGATACTGTTGCCCGGCATATACAGCGAGGCGCTGTCGAGCTGGTAGGTGTTACCGATGATAAAGGTCACCGCCATGGTTTCACCGAGCGCGCGGCCCAGCCCCAGCAT > NC_000913/3909432‑3909705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |