Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,375,828 IS186 (+) +4 bp coding (132‑135/963 nt) menC ← O‑succinylbenzoyl‑CoA synthase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2375828 =2 (0.020)142 (1.450) 59/268 0.0 98.6% coding (135/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23758312 (0.020)102 (1.040) 46/268 0.2 98.0% coding (132/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 2514273 = NA (NA)noncoding (1/1345 nt) IS186 repeat region

Only 100 of 250 total aligned reads displayed.

ATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATT  >  NC_000913/2375692‑2375970
                                                                                                                                           |                                                                                                                                           
tacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGAtc                                                                                                                                             >  2:995403‑M1/137‑140 (MQ=255)
tacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGAtc                                                                                                                                             <  1:996490‑M1/4‑1 (MQ=255)
  gCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtc                                                                                                                                           >  2:553403‑M1/1‑138 (MQ=255)
        gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCa                                                                                                                                     <  1:1679996‑M1/12‑1 (MQ=255)
        gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCa                                                                                                                                     <  1:1220796‑M1/12‑1 (MQ=255)
        gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCa                                                                                                                                     <  1:640298‑M1/12‑1 (MQ=255)
        gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCa                                                                                                                                     <  1:983284‑M1/12‑1 (MQ=255)
        cTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataa                                                                                                                                     >  1:220981‑M1/1‑132 (MQ=255)
           aCGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcg                                                                                                                                  >  1:197699‑M1/1‑129 (MQ=255)
             gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgct                                                                                                                                <  1:1152232‑M1/140‑14 (MQ=255)
             gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgct                                                                                                                                <  2:1148805‑M1/140‑14 (MQ=255)
                 gggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTcgcg                                                                                                                            >  1:1089037‑M1/120‑140 (MQ=255)
                  aGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCACGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCGGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctcactt                                                                                                                           >  2:688736‑M1/1‑122 (MQ=255)
                  aGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaactt                                                                                                                           >  1:1743395‑M1/1‑122 (MQ=255)
                  aGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaactt                                                                                                                           >  2:185007‑M1/1‑122 (MQ=255)
                  aGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaactt                                                                                                                           <  2:1296544‑M1/140‑19 (MQ=255)
                   gacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCt                                                                                                                          >  1:1770361‑M1/118‑140 (MQ=255)
                   gacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCt                                                                                                                          >  2:1159709‑M1/118‑140 (MQ=255)
                       gtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGcc                                                                                                                      <  1:875089‑M1/27‑1 (MQ=255)
                       gtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGcc                                                                                                                      <  2:1183990‑M1/27‑1 (MQ=255)
                        tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCt                                                                                                                     <  1:1417614‑M1/28‑1 (MQ=255)
                         ggAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggtt                                                                                                                    >  2:752303‑M1/1‑115 (MQ=255)
                         ggAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggtt                                                                                                                    >  2:927625‑M1/1‑115 (MQ=255)
                         ggAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggtt                                                                                                                    >  2:927743‑M1/1‑115 (MQ=255)
                          tccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTc                                                                                                                   <  1:511345‑M1/30‑1 (MQ=255)
                           aaGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgt                                                                                                                  <  1:440028‑M1/140‑28 (MQ=255)
                             ctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACg                                                                                                                <  1:1280045‑M1/33‑1 (MQ=255)
                               gacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCa                                                                                                              >  1:1015805‑M1/106‑140 (MQ=255)
                                aTCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtat                                                                                                             <  1:19544‑M1/140‑33 (MQ=255)
                                aTCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtat                                                                                                             <  1:1766553‑M1/140‑33 (MQ=255)
                                   gcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCa                                                                                                          <  2:52234‑M1/39‑1 (MQ=255)
                                          gCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgat                                                                                                   <  2:1387446‑M1/140‑43 (MQ=255)
                                          gCTCGCAATCGCCTGCCAGCCAGTTATTTAACCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgat                                                                                                   <  1:647596‑M1/140‑43 (MQ=255)
                                              gcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCCCCCCCCACCCGTCGCGCTCGCCTTCACGCAGGCCAACAGACCGcc                                                                                               <  1:1626255‑M1/50‑1 (MQ=255)
                                                  tCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgcgaacttaagggttgtggtattacgcctgatatgattta                                                                                           <  2:1171724‑M1/140‑51 (MQ=255)
                                                    gaagaacgcgagtcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTcgc                                                                                         >  1:922547‑M1/85‑140 (MQ=255)
                                                      agaacgcgaggcaacgtcttaccgaggcaccgaggcttcgcattcttcagatggttcaaccctttagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCgg                                                                                       >  2:138687‑M1/83‑140 (MQ=255)
                                                        gccagccaGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgc                                                                                     <  2:495585‑M1/140‑57 (MQ=255)
                                                            cgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGttttt                                                                                 <  1:17014‑M1/64‑1 (MQ=255)
                                                                gcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAAcc                                                                             >  1:764747‑M1/73‑140 (MQ=255)
                                                                    tttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                         <  1:1142513‑M1/140‑69 (MQ=255)
                                                                    ttgacccAGGCCAGCAGCACACTTTGCGCATCTTCCCAGGTTTCCGGACTGCAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttcagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                         <  1:942056‑M1/137‑69 (MQ=255)
                                                                     gtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTg                                                                        >  1:1020265‑M1/68‑140 (MQ=255)
                                                                      tACCCAGGCAAGCAGCACACATTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactct                                                                       <  2:1782933‑M1/140‑71 (MQ=255)
                                                                          cAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttttggtattacgcctgatatgatttatcgtgccgatgaattactctcacg                                                                   >  2:550810‑M1/1‑66 (MQ=255)
                                                                           acgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCgcgc                                                                  >  2:1422251‑M1/62‑140 (MQ=255)
                                                                           acgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCgcgc                                                                  <  1:1484834‑M1/79‑1 (MQ=255)
                                                                           aGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacga                                                                  >  1:177441‑M1/1‑65 (MQ=255)
                                                                           aGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacga                                                                  >  2:1251728‑M1/1‑65 (MQ=255)
                                                                              cAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                               <  1:789892‑M1/140‑79 (MQ=255)
                                                                                gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAac                                                             <  1:700723‑M1/84‑1 (MQ=255)
                                                                                gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAac                                                             <  1:240725‑M1/84‑1 (MQ=255)
                                                                                 caccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAacc                                                            <  1:1021067‑M1/85‑1 (MQ=255)
                                                                                      aggcgtcgcattcttcagatggttcaacccttaaggtagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGACGCGGGTTTTTAACCGCCTGTCGCGCAGAACCAcccc                                                       <  1:1190833‑M1/90‑1 (MQ=255)
                                                                                        gcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCcg                                                     >  1:1167301‑M1/49‑140 (MQ=255)
                                                                                        gcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCcg                                                     >  1:1078555‑M1/49‑140 (MQ=255)
                                                                                             gcattcttcagatggttcaacccttaagttagcgcttatgggaGCTCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACTTACAGACCGTCGCGGGTTTTTATCCGCCTGTCGCGCAGAACCACCCCCGCGTcc                                                >  2:247175‑M1/44‑140 (MQ=255)
                                                                                              cgcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctg                                               <  2:1099057‑M1/140‑95 (MQ=255)
                                                                                              cattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCATTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTAAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCa                                               <  2:1644132‑M1/98‑1 (MQ=255)
                                                                                               gcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                              <  1:588054‑M1/140‑96 (MQ=255)
                                                                                               gcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                              >  1:357710‑M1/1‑45 (MQ=255)
                                                                                               attcttcagctggttcaacccttaagatagcgcttatgggaGATCTCCCCCCCCCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCAt                                              >  2:1601429‑M1/42‑140 (MQ=255)
                                                                                                   ctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgtccca                                          >  1:473454‑M1/1‑41 (MQ=255)
                                                                                                    ttCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccat                                         <  2:1241339‑M1/140‑101 (MQ=255)
                                                                                                    ttCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccat                                         >  1:714967‑M1/1‑40 (MQ=255)
                                                                                                    ttCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccg                                                                                   >  2:772151‑M1/1‑40 (MQ=255)
                                                                                                         tggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTAGCGCAGAACCACCCCCGCGTCCATGGGGATCTGc                                    >  1:1420846‑M1/32‑140 (MQ=255)
                                                                                                          ggttcaacccttacgttagcgcttatgtgaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATCCAGCCCGTCGCGGGTTTTTAACCGCCTGACGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  2:465036‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  1:815487‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  2:87670‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  1:519843‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  2:87814‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  2:1685877‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTCCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  1:1515376‑M1/31‑140 (MQ=255)
                                                                                                          ggttcaacccttaagtaagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   >  1:1564363‑M1/31‑140 (MQ=255)
                                                                                                          ggTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGcc                                   <  1:135728/140‑1 (MQ=255)
                                                                                                            ttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAg                                 >  1:1262391‑M1/29‑140 (MQ=255)
                                                                                                            ttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAg                                 >  2:790373‑M1/29‑140 (MQ=255)
                                                                                                            ttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAg                                 >  1:328722‑M1/29‑140 (MQ=255)
                                                                                                             ttCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaag                                >  1:1302613‑M1/1‑31 (MQ=255)
                                                                                                             tcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGACCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGACCATGGGGATCTGCCAGc                                <  2:1207915‑M1/113‑1 (MQ=255)
                                                                                                              caacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCg                               >  1:1005821‑M1/27‑140 (MQ=255)
                                                                                                              caacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCg                               >  1:1337292‑M1/27‑140 (MQ=255)
                                                                                                                ctgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatcttggtaagccc                             >  2:1042528‑M1/1‑28 (MQ=255)
                                                                                                                 tgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccg                            <  1:1363909‑M1/140‑114 (MQ=255)
                                                                                                                      aagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCt                       <  1:360046‑M1/122‑1 (MQ=255)
                                                                                                                         ttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcg                    >  2:1354159‑M1/16‑140 (MQ=255)
                                                                                                                          cccGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg                   >  2:365041‑M1/1‑18 (MQ=255)
                                                                                                                           agcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcgcg                  <  1:327477‑M1/127‑1 (MQ=255)
                                                                                                                            gcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcgcgc                 <  2:1290851‑M1/128‑1 (MQ=255)
                                                                                                                             cgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCCGCCAGCGGTATACCTGCGCGCt                <  1:1166730‑M1/129‑1 (MQ=255)
                                                                                                                              gcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTcg                                                                     <  1:920248‑M1/76‑1 (MQ=255)
                                                                                                                                 tatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGc            >  2:231961‑M1/8‑140 (MQ=255)
                                                                                                                                  tGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcg           <  1:862940‑M1/140‑131 (MQ=255)
                                                                                                                                  atgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCTCAGAACCACCCCCGCGTCCATGGTGATCTGCCAGCGGTATACCTGCGCGCTACGCa           <  2:666841‑M1/134‑1 (MQ=255)
                                                                                                                                       agaTCtccaataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacg      <  2:1570944‑M1/140‑136 (MQ=255)
                                                                                                                                       aGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACg      <  2:939515‑M1/139‑1 (MQ=255)
                                                                                                                                         aTCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgta    >  2:633597‑M1/1‑3 (MQ=255)
                                                                                                                                         aTCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgta    >  1:846127‑M1/1‑3 (MQ=255)
                                                                                                                                           ctcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaat  >  1:614689‑M1/1‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
ATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATT  >  NC_000913/2375692‑2375970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.