Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4720GT21.4% 233.0 / 17.7 84intergenic (+10/‑343)gtrS/tfaSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related
Reads supporting (aligned to +/- strand):  ref base G (13/53);  new base T (18/0);  total (31/53)
Fisher's exact test for biased strand distribution p-value = 2.17e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTC  >  NC_000913/2470336‑2470606
                                                                                                                                        |                                                                                                                                      
ttgacaTTTAAGCATGCTTTTTTTTGGAATGTTTTTTTCGTTCTACCTTTGATTATTCATAACAGACGTTTTTTTAATTTCTTATATTATTCAAAGTAATCAAGCCATTAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:1165069/135‑1 (MQ=255)
taGAGATTTATGCAAGCAATTATTGGGACTGTATTTTTCGTTCGACCTTTGCTTATAAATAACAGTCGTTTTTTTACTTTATAAAATAATTCAAAGATATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:1162662/140‑1 (MQ=255)
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:1014707/140‑1 (MQ=255)
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:1232388/140‑1 (MQ=255)
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:1263064/140‑1 (MQ=255)
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  1:866124/140‑1 (MQ=255)
taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:531267/140‑1 (MQ=255)
taGAGATTTAAGAAAGCATTTATTTGGAATGTATTTTTCGTTCGACATTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACTATAGTGATTTAAAGCACTAAGTTTAAATTgcgc                                                                                                                                     <  2:315285/140‑1 (MQ=255)
  gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcgc                                                                                                                                   <  1:658647/140‑1 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATAAATACAATATCCATGTAAAGCACAAAGTTTTAATTTGGCGCCaa                                                                                                                                >  1:336699/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAAACAAGACAATATCGATGTAAAGCGCTAAGTTTAAATTGCGCGCCaa                                                                                                                                >  1:402347/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAATAAATAAAGACAATAGCGATTTAAAGCACTAATTTTAAATTTCGCGCCaa                                                                                                                                >  1:336662/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAAAAAATAAATAAAAAATCGATTTAAAGCAAAAAGTTTAAATTTCGCGCCaa                                                                                                                                >  1:1265415/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAATAAATAATTAAAAAAAAACAAGACAAAATCGTTGTAAATCACAAAGTTTAAATTTCGCGCCaa                                                                                                                                >  1:1265668/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAATCACAAATTTTAAAATTCGCGCCaa                                                                                                                                >  1:611446/1‑140 (MQ=255)
     aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAAAAAATAAAAAAAAAAAAAACAATATCGAAGTAAAGCACAAAAATTAAAATGCGCCCCaa                                                                                                                                >  1:1264042/1‑140 (MQ=255)
      tttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAAGAAATCAAGACAAAAGCGATGTAAAGCACAAAGTTTAAATTTCGCGCCAAt                                                                                                                               >  1:1123330/1‑140 (MQ=255)
      tttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAAAAAAACAAGACAAAAGCGATGTAAATCACTAAGTTTAAATTTAGCGCCAAt                                                                                                                               >  1:54942/1‑140 (MQ=255)
      tttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAAAAATTAAAATAAAAAAAGAAAAAAGCCATGTAAATCACTAATTTTATATTGAGCGCCAAt                                                                                                                               >  1:1123444/1‑140 (MQ=255)
       ttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAATAATTAAAAGAAATAAATAAAAAATCGATGTTAATCAAGAAGGTTAAATTTCGCGcccaac                                                                                                                              >  1:1406252/1‑136 (MQ=255)
           gcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTCATACATAACAGACGTATTTTTAATTTCTAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAAACATgg                                                                                                                          <  2:676800/140‑1 (MQ=255)
               gcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAAACAAGAAAAAATCGATGTAAAACACGAAGTTTAAATTTCGCGCCAATAAAGgcgcg                                                                                                                      >  1:279359/1‑140 (MQ=255)
               gcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAATAAAAAAATACAAAATCGATTTAAAGCACTAAGTTTAAATTTCGCGCCAAACAAGgcgcg                                                                                                                      >  1:279407/1‑140 (MQ=255)
                 atttatttGGTATGTATTTTTCTTTCGACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  2:765314/140‑1 (MQ=255)
                 atttatttGGATTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  1:1154571/140‑1 (MQ=255)
                 atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  2:767516/140‑1 (MQ=255)
                 atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  1:892497/140‑1 (MQ=255)
                 atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  1:1633174/140‑1 (MQ=255)
                 atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGca                                                                                                                    <  1:1130240/140‑1 (MQ=255)
                 atttatatGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATAGCGCGCCAATCCTGGAGCGca                                                                                                                    <  2:1274555/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCTTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  2:678944/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCTACCTTTGCTTATACATAACAGTCGTTTTTATAATATATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:1386612/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACTTAACAGTCGTTTTTTTAATTTATAAAATAATACAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  2:904412/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCATAGAAATCATGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCTTGGCGCGcaca                                                                                                                  <  2:716346/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:858636/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:425244/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:534256/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:916485/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:1484978/140‑1 (MQ=255)
                   ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  1:1017587/140‑1 (MQ=255)
                   taatttTGAATTTATTTTTCGTAAGACCTTTGATTATACATAACAGTCGTTATTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                                                  <  2:1748950/138‑1 (MQ=255)
                         ggAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATAAAGAAAAAATCGATGTAAATCACTAAGTTTAAATTTCGCGCCAATAATTGCGCGCACAAGCtat                                                                                                            >  2:1557140/1‑140 (MQ=255)
                          gAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATCAAAGAAAACAATACAATATCGATGTTAATCACTAAGTTTAAATTTCGCGCCAATCATGTCGCGCACAAGCaata                                                                                                           >  2:186758/1‑140 (MQ=255)
                          gAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAAATTCGCGCCAATCAAGGCGCGCACAAGCtata                                                                                                           >  2:857073/1‑140 (MQ=255)
                           aaTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAATAAATAAAGACAAAATCGATTTAAATCACTAAGTTTAAATTTCGCGCCAAACAAGGCGCGCACAAACAataa                                                                                                          >  2:916485/1‑140 (MQ=255)
                               tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATAcc                                                                                                      <  1:1434816/140‑1 (MQ=255)
                               tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATCAAATAAATAAAGACAAAATCCAAGTAAAGCAATAAGTTTAAATTTAGCGCCAATCAATGCGCGCACAAACTAAAAAAcc                                                                                                      >  2:12869/1‑140 (MQ=255)
                                  ttttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAAc                                                                                                   <  2:729824/140‑1 (MQ=255)
                                    ttcgttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCt                                                                                                 <  1:12869/140‑1 (MQ=255)
                                     tcgttcgACCTATGCTTATACAAAACCGACGTATTTTTAATTTCAAACATAATACAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATAGCGCGCCAATCATGGCGCGCACAAGCTATAAAACCACCCTa                                                                                                <  2:1704793/140‑1 (MQ=255)
                                         tcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTTTAAAATAATTAAAATAAATAAAGACAAAATCGATGTAAAGCACAAAGTTTTAAATTCGCGCCAATCATGGCGCGCACAAGCTATAATAACAAACAAAttt                                                                                            >  1:1634453/1‑140 (MQ=255)
                                         tcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAGAAAAAAAGACAAAAGCGATTTAAAGCACGAAGTTTAAATTTAGCCCCAATAAAGGCGCGCACAAGCAAAAATAACAACCAAAatt                                                                                            >  1:1133069/1‑140 (MQ=255)
                                           gACCTTTGCTAATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGAGCGCACAAGCTATAATACCAACCTAATTtct                                                                                          <  2:694885/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGTTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:163222/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:996235/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:819494/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  2:1309950/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:163115/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:239430/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:1469649/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:590788/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:566474/140‑1 (MQ=255)
                                             ccTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                                                        <  1:996485/140‑1 (MQ=255)
                                                       taCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                                              >  2:725867/1‑140 (MQ=255)
                                                       taCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                                              <  1:30872/140‑1 (MQ=255)
                                                       taCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                                              <  1:31103/140‑1 (MQ=255)
                                                              cAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCACTTAGAGTGACta                                                                       <  2:1307983/140‑1 (MQ=255)
                                                                gTCGTTTTTTTAATTTATAAAATAAATCAAAGAAATAAAGAAAAAATCGATGTAAAGCACAAAGTTTAAATTTCGCGCCAATCATGTCGCGCAAAAGCAATAATAACAAACTAATTTCTACTACTCATAGAGTTACtata                                                                     >  2:1391169/1‑140 (MQ=255)
                                                                               tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAtt                                                      <  1:1557140/140‑1 (MQ=255)
                                                                                ataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTg                                                     <  1:174869/140‑1 (MQ=255)
                                                                                  aaaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                                                   <  2:1406252/140‑1 (MQ=255)
                                                                                                 aaTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaaa                                    <  1:873895/140‑1 (MQ=255)
                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt                                   <  2:247547/140‑1 (MQ=255)
                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt                                   <  2:1094172/140‑1 (MQ=255)
                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt                                   <  2:601033/140‑1 (MQ=255)
                                                                                                  aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt                                   <  2:1095543/140‑1 (MQ=255)
                                                                                                     aaGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc                                <  1:758925/140‑1 (MQ=255)
                                                                                                        aCAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTg                             <  1:261475/140‑1 (MQ=255)
                                                                                                            tAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTc                         >  1:807989/1‑140 (MQ=255)
                                                                                                             aGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg                        <  2:1153000/140‑1 (MQ=255)
                                                                                                             aGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg                        <  2:829/140‑1 (MQ=255)
                                                                                                             aGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg                        <  2:1153059/140‑1 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgt                    >  2:1520191/1‑140 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgt                    >  1:1222569/1‑140 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgt                    >  1:1222564/1‑140 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgt                    >  1:185566/1‑140 (MQ=255)
                                                                                                                 aTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgt                    >  1:1222514/1‑140 (MQ=255)
                                                                                                                  tGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCACTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgttgtt                   <  1:250943/140‑1 (MQ=255)
                                                                                                                    tAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGTGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGACTCgttgtt                   <  1:1283774/138‑1 (MQ=255)
                                                                                                                    tAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGTGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGACTCgttgtt                   >  2:1283774/1‑138 (MQ=255)
                                                                                                                            tAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAata         >  2:252753/1‑140 (MQ=255)
                                                                                                                             aaGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAatat        <  1:1131982/140‑1 (MQ=255)
                                                                                                                                   aaaTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATACGTTGTTTATTGTAATATctcctc  >  2:662700/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                      
TAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGTTGTTTATTGTAATATCTCCTC  >  NC_000913/2470336‑2470606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑