Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,908,5140AT29.2% 216.6 / 32.0 131intergenic (‑148/+35)pstB/pstAphosphate ABC transporter ATPase/phosphate ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base A (74/18);  new base T (0/38);  total (74/57)
Fisher's exact test for biased strand distribution p-value = 2.14e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

TCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908377‑3908653
                                                                                                                                         |                                                                                                                                           
tCCTCAGCGTGCCTGATGCACGTCGCTAATCAGGCTTACCGTAGGCCGGAGCAGGCGTTCACGCCGCATCCGGCCAAGTGTGAACCGTGGACAGAGTCCAAAAGGCGCACGGTCGGTCCCCACGCCCCGCTGGGGCGAgg                                                                                                                                           >  2:1697880/1‑140 (MQ=255)
   tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt                                                                                                                                        <  2:893290/140‑1 (MQ=255)
   tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt                                                                                                                                        <  2:1084000/140‑1 (MQ=255)
   tCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAAGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt                                                                                                                                        <  2:1084555/140‑1 (MQ=255)
     aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGAACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAg                                                                                                                                      >  2:873344/1‑140 (MQ=255)
       cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                    >  1:236132/1‑140 (MQ=255)
       cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTGAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGAGGGGTCggg                                                                                                                                    >  1:1691741/1‑140 (MQ=255)
           ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  1:102806/1‑140 (MQ=255)
           ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  1:397090/1‑140 (MQ=255)
           ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                                >  2:196717/1‑140 (MQ=255)
                   aCTTCGCTAATCGGGCTTCCCGTTGGCCGTATCAGGCGTTCACGCCGCATCGGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGAGGGTTAGGGTGTGGGGAAAAc                                                                                                                        <  2:1045111/140‑1 (MQ=255)
                    cTTCGATACTCAGGCTAACCGTAGGCCGGATCTGGCGTTCACGCCGCAACCGGCAAAGTTTTAACCTTGTACAGACTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCATCGGGGGAGAGGTTTAGGTTGAGGGGAAAAcc                                                                                                                       <  2:217516/140‑1 (MQ=255)
                       cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCgtg                                                                                                                    >  1:821179/1‑140 (MQ=255)
                       cGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCgtg                                                                                                                    >  1:821120/1‑140 (MQ=255)
                            aTCGGGCTTACCGTTGGCCGGATCAGGCGTTCACGCCGCATCCGGCAATGTTTTACCGGTCTACAGATACAAAACGGCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGAGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGc                                                                                                               <  1:1363376/140‑1 (MQ=25)
                                 gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:1280526/1‑140 (MQ=255)
                                 gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:1280442/1‑140 (MQ=255)
                                 gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAatat                                                                                                          >  1:242111/1‑140 (MQ=255)
                                     aCCGTTGGCCGGATCAGGGGTTCACGCCGCATCCGGCAAAGTTTTAACGGTGTACAGAGTAAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  1:1614310/140‑1 (MQ=38)
                                     aCCGTTGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACTGAGAAAAATAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGAGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  1:1744520/140‑1 (MQ=38)
                                     aCCGTCGGCCGGATCTGGCGTTCACGCCGCATCCGGCAAAGTTTTAACCGTGTACAGATAAAAAACGGCGCGGGGTCGGCCCCCTCGCCCCTCTGGGGATTGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  1:754091/140‑1 (MQ=255)
                                     aCCGTCGGCCGGATCCGGCGTACACGCCGCATCCGGAAAAGTTTTAACCGTGTACAGAGACAAAAAGGCGCTCGGTCGGTCCCCTCCCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc                                                                                                      <  1:826308/140‑1 (MQ=38)
                                     aCCGTAGGCCGGATCCGGCGTTCACGCCGCATCCGCAAATGTTTTAACCGTTTACAGAGTAAAAATGGCGCTCGGTCGGCCCCCCCGCCCCTGTGGGGTGTGGGTTAGGGTGCGGGCAAAACCGTGTCAGCAATATCAAc                                                                                                      <  1:309836/140‑1 (MQ=255)
                                      ccGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTCCAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAcc                                                                                                     >  1:603247/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCATAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCgtgat                                                                                                >  2:708178/1‑138 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1171255/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1181155/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1453539/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1453811/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1551514/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:1632414/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:21225/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  1:522476/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:977016/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAAGATCAACCGTGtt                                                                                                >  2:748828/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:326861/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCACGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  2:21232/1‑140 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTGAACCGTGTACAGAGGCAAAAAGGCGCGCGGTCGGTCCCCAAGCCCCTCTGGGGAGAGGGGTAGGGGGACGGCCAAACCGCGACCGCAATAGCAACCgactt                                                                                                >  2:374326/1‑136 (MQ=255)
                                           ggCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTAAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAAAATAAACCTTGtt                                                                                                >  2:898802/1‑140 (MQ=255)
                                           ctaaggAACAGGCGTTCACGCCGCATCCGGCAAAGAGATAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt                                                                                                >  1:108601/5‑140 (MQ=255)
                                            gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGttt                                                                                               >  2:1660325/1‑140 (MQ=255)
                                            gCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGttt                                                                                               >  2:1192411/1‑140 (MQ=255)
                                                gATCAGGCGTTCCCGCCGCATCCGGCAAAGTGTTAACCGTGTACCGAGACAAAAAGGCGCTCGGTCGGACCCCTCGCCCCTCTGGGGTGAGGTTTCGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc                                                                                           <  2:100051/140‑1 (MQ=255)
                                                 aTCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttct                                                                                          >  1:1176046/1‑140 (MQ=255)
                                                 aTCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttct                                                                                          >  1:174913/1‑140 (MQ=255)
                                                 aTCAGGCGTTAACGCCTCATCCGGCAAAGTGTTAACCGTGTAGAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGAACCTCTGGGGATAGGTTTAGGGATAGGTGAAAACCGTCTAAGCAATATCAAACGTGTTTAtact                                                                                          >  2:720454/1‑140 (MQ=255)
                                                        gTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaa                                                                                   >  1:286334/1‑140 (MQ=255)
                                                                            aGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGt                                                               >  1:601817/1‑140 (MQ=255)
                                                                                  acccGTGTACCTATTCAACACGGCGCTCGTTGGGTCCCCGCGCCCCTGGGGGTAGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  1:150587/138‑1 (MQ=255)
                                                                                  aaCCTTTTACATTGTCAAAAAGGCGCTGGTTGGGTCCCCTCGCCCCTGGGGGTTGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  1:150603/140‑1 (MQ=255)
                                                                                  aaCCGTGTCCATAGTAAAAACGGCGCTCGGTCGGTCCCCTCGCCCCGCGGGGCTGTGGGTTTGGGTGCGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagca                                                         <  1:1012887/140‑1 (MQ=255)
                                                                                   aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:292535/1‑140 (MQ=255)
                                                                                   aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:1543288/1‑140 (MQ=255)
                                                                                   aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  1:1637048/1‑140 (MQ=255)
                                                                                   aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:512555/1‑140 (MQ=255)
                                                                                   aCCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:507947/1‑140 (MQ=255)
                                                                                   aCCGTGAACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag                                                        >  2:1017081/1‑140 (MQ=255)
                                                                                       tgtACAGAGTCAAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGt                                                    <  2:1379927/140‑1 (MQ=255)
                                                                                       tgtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGt                                                    <  2:1699178/140‑1 (MQ=255)
                                                                                       tgtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGt                                                    <  2:1627554/140‑1 (MQ=255)
                                                                                        gtACAGAGTCAAACAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTTGGGTGAGGGGACAACCGTGTCAGCAATAGCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGGTCAGCAGCAGTa                                                   >  2:1540313/1‑140 (MQ=39)
                                                                                        gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:1188991/1‑140 (MQ=255)
                                                                                        gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:1188982/1‑140 (MQ=255)
                                                                                        gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  2:929505/1‑140 (MQ=255)
                                                                                        gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:486062/1‑140 (MQ=255)
                                                                                        gtACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTa                                                   >  1:188768/1‑140 (MQ=255)
                                                                                            ttataaaaaacGGGGCTGGGTGGTTCCCCTGGCCCCTCTGGGTTTTGGTTTTGGTTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1281885/134‑1 (MQ=255)
                                                                                            tgagTCAAAACGGCGCTCGGTGGGTCCCCGCGCCCCTGTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:723813/139‑1 (MQ=255)
                                                                                            atattCAAAAAGGCGCTCGGTCGGCCCCCTCGCCCCTGTGGGGTGTGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:166018/136‑1 (MQ=255)
                                                                                            agatccAAAATGGGGCTCGGTGGGTCCCCTCGCCCCTCGGGGTTTTGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1085292/135‑1 (MQ=255)
                                                                                            agatacAAAAAGGCGCTCGGTCGGACCCCTCGCCCCTCTGGGCAGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:1320011/135‑1 (MQ=255)
                                                                                            agagTCAAAACGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:709522/140‑1 (MQ=255)
                                                                                            agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:723933/140‑1 (MQ=255)
                                                                                            agagTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  2:1250341/140‑1 (MQ=255)
                                                                                            agagTAAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTGTGGGTAGTGGTTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGca                                               <  1:901487/140‑1 (MQ=255)
                                                                                              agTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca                                             >  1:288081/1‑140 (MQ=255)
                                                                                              agTCAAAAAGGCGCTCGGTCGGACCCCTCGCCCCTCTGGGGACAGGGGTAGGCAGAGGGGAAAACCGACTCACCAATATCAACCGTGTTAAATCTTCGCAAAAACAACGCGCGCCAGAATCTGCAGCAGCAGTACGcaca                                             >  2:1661010/1‑140 (MQ=255)
                                                                                               gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  2:1684183/1‑140 (MQ=255)
                                                                                               gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:1580468/1‑140 (MQ=255)
                                                                                               gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:730843/1‑140 (MQ=255)
                                                                                               gTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAg                                            >  1:1583485/1‑140 (MQ=255)
                                                                                                   aaatGGCGCTGGGTCGGACCCCGCGCCCCTGGGGGGTGTGGGTTAGGGTGAGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1227045/140‑1 (MQ=255)
                                                                                                   aaatGGCGATCGGTCGGTCCCCTCGCCACTCTGGGGAGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:1745925/140‑1 (MQ=255)
                                                                                                   aaacGGCGCTGGGTCGGCCCCCTCGCCCCTCTGGGGTGTGGGTTCGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  1:503072/140‑1 (MQ=255)
                                                                                                   aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGTGGTTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTa                                        <  2:1428377/140‑1 (MQ=255)
                                                                                                     acggCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGTGAGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAAt                                      <  1:648222/138‑1 (MQ=39)
                                                                                                          gcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCTGCAGCAGTACGCACAGGGTAATGATCa                                 >  1:1364792/1‑140 (MQ=255)
                                                                                                               gtgggaccccTCGCCCCTCTGGGGATTGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcc                            <  1:774343/134‑1 (MQ=255)
                                                                                                               gtcggtcCCCTCGCCCCTCTGGGGAGTGGTTTCGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcc                            <  1:772054/140‑1 (MQ=255)
                                                                                                               gcgggaccccTCGCCCCACTGGGTAGTGGGTTGGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcc                            <  1:760549/134‑1 (MQ=255)
                                                                                                                     cccctcgcccctcgGGGGTGTGGGTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:1023087/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTGTGGGTTGCGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:548107/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTCTGGGTAGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:548094/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTCTGGGTAGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:691523/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTCTGGGGTGTGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:691519/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTCTGGGGAGTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:1021901/140‑1 (MQ=255)
                                                                                                                     ccccTCGCCCCTCTGGGGAGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGcc                      <  1:548163/140‑1 (MQ=255)
                                                                                                                      cccTCGCCCCACTGGGGTGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGccc                     <  2:581356/140‑1 (MQ=255)
                                                                                                                                  tGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct         >  2:1348974/1‑140 (MQ=255)
                                                                                                                                         agGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc  >  1:1390200/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                           
TCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTC  >  NC_000913/3908377‑3908653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑