New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3774236 =NA (NA)10 (0.030) 4/264 NT NA noncoding (1/99 nt) RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3774261 = NA (NA)noncoding (26/99 nt) RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 833 total aligned reads displayed.

GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCACCCC  >  NC_000913/3774087‑3774385
                                                                                                                                                     |                                                                                                                                                     
tcaatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagg                                                                                                                                                       >  2:836131‑M1/150‑150 (MQ=255)
tcaatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagg                                                                                                                                                       <  2:2434373‑M1/1‑1 (MQ=255)
gTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTg                                                                                                                                                       >  2:3595943/1‑150 (MQ=255)
 ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGc                                                                                                                                                      >  2:214674/1‑150 (MQ=255)
  tATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGcc                                                                                                                                                     <  2:1753500/150‑1 (MQ=255)
  aatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGcc                                                                                                                                                     <  1:4705495‑M1/3‑1 (MQ=255)
  aatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGcc                                                                                                                                                     <  2:3479635‑M1/3‑1 (MQ=255)
   atgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCt                                                                                                                                                    >  1:254813‑M1/147‑150 (MQ=255)
     gtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGa                                                                                                                                                  >  1:1228191‑M1/145‑150 (MQ=255)
     cACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGa                                                                                                                                                  <  1:2789383/150‑1 (MQ=255)
      tttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGAt                                                                                                                                                 >  1:3836163‑M1/144‑150 (MQ=255)
      tttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatacatcctgtagGCCTGAt                                                                                                                                                 >  1:3353038‑M1/144‑150 (MQ=255)
      aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGAt                                                                                                                                                 >  1:3479635/1‑150 (MQ=255)
       ccAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATg                                                                                                                                                >  2:199646/1‑150 (MQ=255)
       ccAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATg                                                                                                                                                >  2:5423232/1‑150 (MQ=255)
         aGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcg                                                                                                                                              <  1:1530208/150‑1 (MQ=255)
          gCCTGACCAATGCACTGGATGATGAGTCAGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc                                                                                                                                             <  2:4119417/150‑1 (MQ=255)
           ccTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCt                                                                                                                                            >  1:798007/1‑150 (MQ=255)
            cTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTa                                                                                                                                           >  2:3927058/1‑150 (MQ=255)
            cTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTa                                                                                                                                           <  1:3968168/150‑1 (MQ=255)
              gACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACg                                                                                                                                         >  1:1855639/1‑150 (MQ=255)
                 cAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCtt                                                                                                                                      >  2:3727838/1‑150 (MQ=255)
                      cgcTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGACGGGGGGGTTAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                                 >  1:4512956/3‑150 (MQ=255)
                      cACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                                 >  2:5240067/1‑150 (MQ=255)
                       aCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAgg                                                                                                                                <  1:2451442/150‑1 (MQ=255)
                       aCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAgg                                                                                                                                >  2:492424/1‑150 (MQ=255)
                           gatgatGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                            <  1:1967515/150‑1 (MQ=255)
                             tgatgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACa                                                                                                                          >  1:5379013/1‑150 (MQ=255)
                               atgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAgg                                                                                                                        >  1:3727727/1‑150 (MQ=255)
                                    tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCa                                                                                                                   >  1:2251347/1‑150 (MQ=255)
                                    tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCa                                                                                                                   >  2:2974874/1‑150 (MQ=255)
                                    tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGAAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCa                                                                                                                   >  1:4330954/1‑150 (MQ=255)
                                     ccGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCAt                                                                                                                  <  1:2717112/150‑1 (MQ=255)
                                      cGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATc                                                                                                                 >  2:4268377/1‑150 (MQ=255)
                                      cGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATc                                                                                                                 >  1:234742/1‑150 (MQ=255)
                                       gTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATca                                                                                                                >  1:5501018/1‑150 (MQ=255)
                                       gTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATca                                                                                                                <  1:2054138/150‑1 (MQ=255)
                                           tCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAt                                                                                                            >  1:4219099/1‑150 (MQ=255)
                                               gCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATttgt                                                                                                        <  1:5058274/150‑1 (MQ=255)
                                                cGTCTTGCACACACCACCAGCGTGGATGAAGTTCTGGAACTGCTGGGATGTCGTAAGTAATCCAATCACACCCTCTCCACATTGATAAGGTGGTTTTAATTGCCTGATGCTCTTCGCTTATCAGGCCTACAGGATGCATCACAATttgtt                                                                                                       <  1:1160726/150‑1 (MQ=255)
                                                cGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATttgtt                                                                                                       <  2:1654698/150‑1 (MQ=255)
                                                cGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATttgtt                                                                                                       <  1:1625237/150‑1 (MQ=255)
                                                   cTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGaa                                                                                                    >  2:3093082/1‑150 (MQ=255)
                                                     ggCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAtt                                                                                                  <  2:5337644/150‑1 (MQ=255)
                                                      gCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACg                                                                                                                                         <  2:1395091/110‑1 (MQ=255)
                                                        acacacCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGc                                                                                               >  1:5118463/1‑150 (MQ=255)
                                                            accaccAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGt                                                                                           >  1:1909731/1‑150 (MQ=255)
                                                              caccaGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTc                                                                                         <  2:5146260/150‑1 (MQ=255)
                                                               accaGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCt                                                                                        <  1:668605/150‑1 (MQ=255)
                                                                ccaGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCtt                                                                                       <  2:5660333/150‑1 (MQ=255)
                                                                    cGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAg                                                                                   <  1:466499/150‑1 (MQ=255)
                                                                     gTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAgg                                                                                  >  1:5214637/1‑150 (MQ=255)
                                                                     ctGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCACTCCACATGCAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTCTTGAATTTGCACGTTCTTGTAgg                                                                                  <  2:727795/149‑1 (MQ=255)
                                                                       ggATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGcc                                                                                <  2:1311115/150‑1 (MQ=255)
                                                                         aTGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCgg                                                                              >  1:1001039/1‑150 (MQ=255)
                                                                             aGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAGTTGTTGAATTTGCACGTTCTTGTAGGCCGGATaa                                                                          >  1:4890729/1‑150 (MQ=255)
                                                                              gTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAg                                                                         >  1:1399115/1‑150 (MQ=255)
                                                                                gCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGgc                                                                       <  2:3769975/150‑1 (MQ=255)
                                                                                 cTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCa                                                                                                                                  >  1:1762621/1‑90 (MQ=255)
                                                                                 cTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGgcg                                                                      <  1:214540/150‑1 (MQ=255)
                                                                                    gAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCtt                                                                   <  2:3185585/150‑1 (MQ=255)
                                                                                    gAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCtt                                                                   >  1:5592155/1‑150 (MQ=255)
                                                                                    gAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCtt                                                                   <  1:1094470/150‑1 (MQ=255)
                                                                                     gcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  2:4816137‑M1/25‑1 (MQ=255)
                                                                                     aaCTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAATGCGCTTa                                                                  <  2:2561231/150‑1 (MQ=255)
                                                                                      aCTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAc                                                                 >  2:2734617/1‑150 (MQ=255)
                                                                                        tgctgGCAGGTCGTAAGTAATCCAATACCACCCTCTCCAAATGGAGAAGGGGGGGTTATTTGCCTGATGCGCTACGCTGATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCAGGATAAGGCGCTTAcgc                                                               >  1:49509/1‑150 (MQ=39)
                                                                                           tgGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgccgc                                                            >  2:5573940/1‑150 (MQ=255)
                                                                                           tgGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgccgc                                                            >  2:2290517/1‑150 (MQ=255)
                                                                                           tgGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgccgc                                                            >  1:5817754/1‑150 (MQ=255)
                                                                                             gCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCAt                                                          >  1:1684356/1‑150 (MQ=255)
                                                                                                 gTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCgg                                                      <  2:605138/150‑1 (MQ=255)
                                                                                                    gtaagtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGgcgc                                                   >  1:437298/1‑150 (MQ=255)
                                                                                                    gtaagtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGgcgc                                                   >  1:4583933/1‑150 (MQ=255)
                                                                                                     taagtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCt                                                  <  2:1535845/150‑1 (MQ=255)
                                                                                                       attaaTCCAATCCCACCCTCTCCACATGGATATGGTGGGTTTATTTGCCTGTTGCTCTACGCTTATCAGGCCTACTGTATGCATCAAAATTTGTTTATTTTGCACGTTCTTGTTGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGc                                                <  1:5703741/148‑1 (MQ=255)
                                                                                                       agtaaTCCAATCCCACCCTCTCCACATGGAGACGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAGTTGTTGACGGTGCACGGTCGTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGc                                                >  2:5017392/1‑150 (MQ=37)
                                                                                                            tccaatccCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTAACGCCGCATCCGGCGCTCCCCctc                                           >  1:4424035/1‑150 (MQ=255)
                                                                                                                    cACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACg                                   >  1:3588106/1‑150 (MQ=255)
                                                                                                                        ctctCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGgaga                               >  1:3078882/1‑150 (MQ=255)
                                                                                                                        ctctCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGgaga                               >  1:3210783/1‑150 (MQ=255)
                                                                                                                             cacaTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGtt                          >  2:32865/1‑150 (MQ=255)
                                                                                                                              acaTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGttt                         >  2:4394136/1‑150 (MQ=255)
                                                                                                                                aTGGAGAAGGTGGGGTTATTTGCCTGATGCGCTCCGCTTATCCGGCCTACCGGATGCAACACAATTTGTTGAATTTGCCCGTTCTTGTAGGCCGGATATGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTgg                       <  1:2902724/150‑1 (MQ=38)
                                                                                                                                aTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTgg                       <  2:1080412/150‑1 (MQ=255)
                                                                                                                                aTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTgg                       <  2:4630495/150‑1 (MQ=255)
                                                                                                                                  ggAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTCCAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGt                     >  2:1786014/1‑150 (MQ=255)
                                                                                                                                   gagaAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTg                    >  2:4561239/1‑150 (MQ=255)
                                                                                                                                    agaAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTCACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGa                   <  1:4758438/150‑1 (MQ=255)
                                                                                                                                     gacggTGGGGTTAATGGCCTGAGGCGCTACGCTTATCCGGCCTCCCGGATGCATCACATTTTGTTGAATTTGCTCGTTCTTGTTGGCCGGATAAGGCGCTTTCGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAg                  <  1:2974874/147‑1 (MQ=255)
                                                                                                                                     gaAGGTGGGGTTATTTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTTGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAg                  <  1:5271505/150‑1 (MQ=255)
                                                                                                                                     gaAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAg                  >  1:4082263/1‑150 (MQ=255)
                                                                                                                                     gaAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGAGGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAg                  <  1:5423244/150‑1 (MQ=255)
                                                                                                                                      taGGTGGGGTTTATTGCCTGCTGCGCTACGATTATCAGGCCGACTGGATGCATCCCAATTTGTTTAATGTGCACGTTCTTGTAGGCCGTTTAAGGCGCTTACGCCGCATCGGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAgg                 <  1:2655438/149‑1 (MQ=255)
                                                                                                                                              gTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGcc         >  2:2887381/1‑150 (MQ=255)
                                                                                                                                              gTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCAGCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGcc         >  2:1930348/1‑150 (MQ=255)
                                                                                                                                                 aaTTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCa      <  2:4695684/150‑1 (MQ=255)
                                                                                                                                                 aaTTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCa      >  2:1192409/1‑150 (MQ=255)
                                                                                                                                                  aTTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCAc     >  2:361804/1‑150 (MQ=255)
                                                                                                                                                   ttGCCTGATGTGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCAcc    >  1:918784/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCACCCC  >  NC_000913/3774087‑3774385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.