New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 899775NA (NA)6 (0.030) 4/264 NT NA noncoding (80/98 nt) RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 899786 NA (NA)noncoding (91/98 nt) RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP82 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 319 total aligned reads displayed.

CTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTC  >  NC_000913/899628‑899924
                                                                                                                                                   |                                                                                                                                                     
  gctgGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACACAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGc                                                                                                                                                   <  2:2604394/150‑1 (MQ=255)
    tgGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGt                                                                                                                                                 >  2:722139/1‑150 (MQ=255)
    tgGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGt                                                                                                                                                 >  1:1295866/1‑150 (MQ=255)
    tgGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGt                                                                                                                                                 >  1:2803934/1‑150 (MQ=255)
     ggTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTa                                                                                                                                                <  1:1975629/150‑1 (MQ=255)
       tGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAgc                                                                                                                                              <  2:2910931/150‑1 (MQ=255)
       tGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAgc                                                                                                                                              <  1:2247743/150‑1 (MQ=255)
         aaGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAgcgc                                                                                                                                            >  1:1895476/1‑150 (MQ=255)
          aGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                           >  1:2281644‑M2/1‑149 (MQ=255)
           gCACTAAAAAAGCCGCATGTGCGGCTTCTGCTTGCTGACCAAGTGCGCGTTGTTTTTGCCGGATGCGGCGTAGACGCCTTATCCGGCCTACAAATGCGTGCAATGTCAATAGAGTGCATGGGCCATGTTGGCCTGATCAGCGTGGCGCag                                                                                                                                          >  2:876653/1‑149 (MQ=21)
           ccaATAAAAAAGCCGCATGTGCGGCTACAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCat                                                                                                                                          >  1:3263435‑M2/2‑148 (MQ=255)
            cAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatc                                                                                                                                         <  1:1467311‑M2/150‑4 (MQ=255)
              aTAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATgcgctacgcttatcag                                                                                                                                       <  1:1017494‑M1/150‑17 (MQ=255)
               tAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcagg                                                                                                                                      <  1:4089659‑M2/150‑7 (MQ=255)
                tctgaagccgCACATGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcaggc                                                                                                                                     <  1:3341929‑M2/146‑8 (MQ=255)
                aaaaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcaggc                                                                                                                                     <  1:2906651‑M2/150‑8 (MQ=255)
                  aaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCTCGATGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAGTTCAATACATTGCATGGGCCATGTAGGCCTGATGAGCGTAGCGCATCAGGCaa                                                                                                                                   >  2:2432815/1‑150 (MQ=255)
                  aaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                                                                   >  2:2432666/1‑150 (MQ=255)
                  aaaaGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                                                                   <  1:2593328/150‑1 (MQ=255)
                        cGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAc                                                                                                                             <  2:1604710/150‑1 (MQ=255)
                        cGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAc                                                                                                                             <  1:4055224/150‑1 (MQ=255)
                         gCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTAcc                                                                                                                            >  1:1177796/1‑150 (MQ=255)
                                 ggCTTCAGATTGCTGACACAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTGtcat                                                                                                                    <  2:1786036/150‑1 (MQ=255)
                                   cTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcatca                                                                                                                  <  2:1710592/150‑1 (MQ=255)
                                   cTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcatca                                                                                                                  >  1:429810/1‑150 (MQ=255)
                                   cTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGtcatca                                                                                                                  <  2:3960162/150‑1 (MQ=255)
                                         aTTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCa                                                                                                            >  1:3119310/1‑150 (MQ=255)
                                               gACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCcgc                                                                                                      >  1:2710371/1‑150 (MQ=255)
                                               gACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCcgc                                                                                                      >  1:3941464/1‑150 (MQ=255)
                                                  aaaGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGt                                                                                                   >  2:3224350/1‑150 (MQ=255)
                                                     gTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGc                                                                                                <  1:2041558/150‑1 (MQ=255)
                                                      tGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCg                                                                                               <  1:2749576/150‑1 (MQ=255)
                                                         gcgTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCt                                                                                            <  1:2487656/150‑1 (MQ=255)
                                                         gcgTTGTTTATGCCGGATGCGGCGTAAACGCCATATCCGGCCTACAAAAGCGTGCAAATTCAATAAATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCt                                                                                            >  1:1697706/1‑150 (MQ=255)
                                                             tgttTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCt                                                                                        <  1:4026298/150‑1 (MQ=255)
                                                               tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGa                                                                                      <  2:1826141/150‑1 (MQ=255)
                                                               tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGa                                                                                      <  1:862329/150‑1 (MQ=255)
                                                                ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGaa                                                                                     <  2:1895410/150‑1 (MQ=255)
                                                                ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCGTTCTGaa                                                                                     >  1:2131568/1‑150 (MQ=255)
                                                                 tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAAt                                                                                    <  1:3820033/150‑1 (MQ=255)
                                                                     ccGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTa                                                                                <  1:791328/150‑1 (MQ=255)
                                                                     ccGGATGCGGCGTAAAAGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAATCCGCGGTTGCGGCTTTCTGAATCTTa                                                                                >  1:1772798/1‑150 (MQ=255)
                                                                         ataaggcgTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACtgt                                                                            >  2:2983053/5‑150 (MQ=25)
                                                                         ataaggcgTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACtgt                                                                            >  2:1020277/5‑150 (MQ=25)
                                                                            cggcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTggg                                                                         >  1:3560238/1‑150 (MQ=255)
                                                                              gcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATGAGGCAATTTTACCGTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGaa                                                                       >  2:1367260/1‑150 (MQ=255)
                                                                              gcgTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGACTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGac                                                                       >  1:1261920/1‑149 (MQ=255)
                                                                                  aaaCGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCAc                                                                   <  2:1489208/150‑1 (MQ=255)
                                                                                  aaaCGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCAc                                                                   <  2:4122786/150‑1 (MQ=255)
                                                                                   aaCGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACt                                                                  <  2:3960790/150‑1 (MQ=255)
                                                                                   aaCGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACt                                                                  <  2:3653106/150‑1 (MQ=255)
                                                                                      gCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGt                                                               >  2:2272503/1‑150 (MQ=255)
                                                                                      gCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGt                                                               <  2:1151853/150‑1 (MQ=255)
                                                                                        cTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGTTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCa                                                             <  1:764528/150‑1 (MQ=255)
                                                                                        cTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACGTTTGTCATCAGTCTCAAGCCGGGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCa                                                             >  1:108071/1‑150 (MQ=255)
                                                                                        cTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCa                                                             >  1:2190320/1‑150 (MQ=255)
                                                                                             ccGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAt                                                        <  2:2291926/150‑1 (MQ=255)
                                                                                                gCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAtttt                                                     <  2:327508/150‑1 (MQ=255)
                                                                                                 ccTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAttttt                                                    <  1:1905747/150‑1 (MQ=255)
                                                                                                 ccTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAttttt                                                    <  1:3834838/150‑1 (MQ=255)
                                                                                                 ccTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAttttt                                                    <  1:337467/150‑1 (MQ=255)
                                                                                                  cTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAtttttt                                                   <  2:3574446/150‑1 (MQ=255)
                                                                                                  cTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGAtttttt                                                   <  1:3425640/150‑1 (MQ=255)
                                                                                                     cAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGAt                                                <  1:2573365/150‑1 (MQ=255)
                                                                                                     cAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGAt                                                <  1:2879633/150‑1 (MQ=255)
                                                                                                      aaaaGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATa                                               >  2:4025131/1‑150 (MQ=255)
                                                                                                      aaaaGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATa                                               >  2:1262184/1‑150 (MQ=255)
                                                                                                       caaGCGTGCACATTCAAGACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATaa                                              <  2:3475561/149‑1 (MQ=255)
                                                                                                          gCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTa                                           <  1:68569/150‑1 (MQ=255)
                                                                                                              gCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGt                                       <  2:240668/150‑1 (MQ=255)
                                                                                                                  aTTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGc                                   >  2:1005548/1‑150 (MQ=255)
                                                                                                                    tCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaat                                 <  2:817593‑M2/150‑108 (MQ=255)
                                                                                                                    tCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCtt                                 <  2:1409957/150‑1 (MQ=255)
                                                                                                                         aCATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAAtt                            <  2:1895494/150‑1 (MQ=255)
                                                                                                                         aCATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAAtt                            >  1:524212/1‑150 (MQ=255)
                                                                                                                         aCATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAAtt                            >  2:595299/1‑150 (MQ=255)
                                                                                                                           agtGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgc                          <  2:3121618/148‑1 (MQ=255)
                                                                                                                            ttGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgct                         <  2:2474307/150‑1 (MQ=255)
                                                                                                                            ttGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATtgct                         <  1:1007282/150‑1 (MQ=255)
                                                                                                                                  gggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgc                   <  2:2855243/150‑1 (MQ=255)
                                                                                                                                  gggCCATGTAGGCCAGATAAGCGTAGCGCATCAGGCAAATTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCAGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgc                   <  1:3097628/150‑1 (MQ=255)
                                                                                                                                   ggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgcg                  <  1:1450927/150‑1 (MQ=255)
                                                                                                                                   ggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgcg                  <  1:1378806/150‑1 (MQ=255)
                                                                                                                                   ggCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAgcg                  >  1:366975/1‑150 (MQ=255)
                                                                                                                                             gCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAg        <  2:1560967/150‑1 (MQ=255)
                                                                                                                                              ccTGATgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggctttttta       >  2:3824441‑M1/1‑6 (MQ=255)
                                                                                                                                              ccTGATgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggctttttta       <  1:1730757‑M1/150‑145 (MQ=255)
                                                                                                                                               cTGATgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttat      <  2:3730799‑M1/150‑146 (MQ=255)
                                                                                                                                               cTGATAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttat      <  1:1017681‑M2/150‑135 (MQ=255)
                                                                                                                                                tGATgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttatt     <  2:1513160‑M1/150‑147 (MQ=255)
                                                                                                                                                 gATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGtttt    >  2:2703389/1‑150 (MQ=255)
                                                                                                                                                 gATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGtttt    >  2:2075082/1‑150 (MQ=255)
                                                                                                                                                 gATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGtttt    <  2:1246220/150‑1 (MQ=255)
                                                                                                                                                 gATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGtttt    >  1:587657/1‑150 (MQ=255)
                                                                                                                                                  aTgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttattgc   <  2:3985274‑M1/150‑149 (MQ=255)
                                                                                                                                                  aTAAGCGTAGCGCatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttattgc   <  2:54516‑M2/150‑138 (MQ=255)
                                                                                                                                                  aTAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCGGCGCGTTATTCAGttttt   >  1:2408959/1‑150 (MQ=255)
                                                                                                                                                   tgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttattgct  >  2:2819346‑M1/1‑1 (MQ=255)
                                                                                                                                                   tgcgctacgcttatcaggcctacatggcccatgcaatgtattgaatttgcacgcttttgtaggccggataaggcgtttacgccgcatccggcataaacaacgcgcactttgtcagcaatctgaagccgcacatgcggcttttttattgct  >  1:157632‑M1/1‑1 (MQ=255)
                                                                                                                                                   tAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTc  <  1:221947/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CTGCTGGTGAAGCAATAAAAAAGCCGCATGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGGGCCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTACCTTTGTCATCAGTCTCAAGCCGCGGTTGCGGCTTTCTGAATCTTACTGTGGGAACCACTGGTCACTGATTTTTTGATAAGTACCGTCAGCTTTAATTGCTGCCAGCGCGTTATTCAGTTTTTC  >  NC_000913/899628‑899924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.