| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,227,968 | T→G | 6.6% | V56V (GTT→GTG) | ygjJ → | putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,227,968 | 0 | T | G | 6.6% | 585.3 / 8.7 | 185 | V56V (GTT→GTG) | ygjJ | putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base T (98/72); new base G (2/13); total (100/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.92e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
GCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCACGACGGCAATG > NC_000913/3227823‑3228116 | gCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggtg < 1:1798876/150‑1 (MQ=255) cAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTtggtgg < 1:1951077/150‑1 (MQ=255) agagCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTGGGTGGa > 2:371019/1‑150 (MQ=255) agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGata < 2:2357424/150‑1 (MQ=255) agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGata < 2:3169645/150‑1 (MQ=255) agCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGata < 1:169822/150‑1 (MQ=255) gCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatat < 2:712763/150‑1 (MQ=255) gCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatat < 2:2026941/150‑1 (MQ=255) tttACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatatat < 1:943838/149‑1 (MQ=255) aTTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGatatat < 1:3830258/150‑1 (MQ=255) tACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATgg > 2:2964293/1‑150 (MQ=255) cTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGAt > 2:2461506/1‑150 (MQ=255) cTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGAt > 2:2361030/1‑150 (MQ=255) ttGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCACTTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGCATTAGGGGGGGGTGGATATAGGGagg > 2:3785382/1‑148 (MQ=255) ttGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGAtt > 1:2646809/1‑150 (MQ=255) ctctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTag > 2:2828628/1‑150 (MQ=255) ctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTagag < 1:818481/150‑1 (MQ=255) ctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTagag < 1:252525/150‑1 (MQ=255) ctGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTGGGTGGATATATGGATTTagag < 1:1773716/150‑1 (MQ=255) tGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAgg < 1:2268365/150‑1 (MQ=255) ccGTTGTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGt < 2:3592821/150‑1 (MQ=255) ttttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTgag < 2:2302889/150‑1 (MQ=255) ttttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGACCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCAACTCCTTCAATTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTgag > 1:2366796/1‑150 (MQ=255) ttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGaa < 2:2267782/150‑1 (MQ=255) ttGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGaa < 1:3506430/150‑1 (MQ=255) tGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAAt < 2:1895626/150‑1 (MQ=255) gCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATa > 2:3822162/1‑150 (MQ=255) cTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACTTCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGTGGGTGAGAATaa > 1:304832/1‑150 (MQ=255) tACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATaaa < 1:2230462/150‑1 (MQ=255) tACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATaaa < 2:3744529/150‑1 (MQ=255) aCGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAAc > 2:347354/1‑150 (MQ=255) cGCCTTTTCTGCGGCAGGAGAAGAAGCTCGTCCGGCAGAACATGACGACACAAACACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACa < 2:3583812/150‑1 (MQ=255) tttCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAAt > 2:4096269/1‑150 (MQ=255) tCTGCGGCAGGAGAAGAAGCACGTCCGGCATAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATAc < 2:1095386/150‑1 (MQ=255) tGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAg < 1:1815557/150‑1 (MQ=255) ggCTGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCTTTTTTACGGCTAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGa < 1:3449003/150‑1 (MQ=255) ggCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGa > 1:3214133/1‑150 (MQ=255) aGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACgg > 1:3283396/1‑150 (MQ=255) gagaAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTa > 2:257044/1‑150 (MQ=255) agaagaAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc > 2:1342413/1‑150 (MQ=255) agaagaAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAc > 2:3395860/1‑150 (MQ=255) taagaagCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCTAATTAGGGTTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc < 2:4032811/149‑1 (MQ=255) gaagaaGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTAcc < 2:4032839/150‑1 (MQ=255) agaagCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCta < 2:2888235/150‑1 (MQ=255) gaagCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCtat > 2:3451044/1‑150 (MQ=255) gCACGTCCGGCAGAACATGACGACACAAAAACACCCGAAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATAtt < 2:142807/150‑1 (MQ=255) ccGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGt < 2:2008030/150‑1 (MQ=255) cAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGcc > 1:3912553/1‑150 (MQ=255) aGAACATGACGACACAAAAACACCCGCATTTACCTCGACATCTCCTCCTTCATTTCTTTTTTACGGCGATTTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCt < 1:2474574/150‑1 (MQ=255) aCATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAg < 2:326353/140‑1 (MQ=255) aCATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAg > 1:326155/1‑140 (MQ=255) aCATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGAGTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGga > 2:1562311/1‑150 (MQ=255) cacaAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGGGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGTGAATATACATAAATACAGCGACGGTACCTATATTGTAGGTGGCGTGGAGATGAAGTa > 1:3580739/1‑150 (MQ=255) cacaAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTa > 1:681112/1‑150 (MQ=255) cacaAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTa > 1:593545/1‑150 (MQ=255) acaAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTAc > 1:893991/1‑150 (MQ=255) cccGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTgg > 1:1380723/1‑150 (MQ=255) ccGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGt > 1:646345/1‑150 (MQ=255) ccGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACATATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGt > 1:279318/1‑150 (MQ=255) gCAATTACCTCTACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTc < 2:3399450/150‑1 (MQ=255) gCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAACCATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTc < 2:2742805/150‑1 (MQ=255) gCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGGGGGTGGATATATGGATTTAGCGGGTGAGAATAAACATAACTACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTc < 1:1165090/150‑1 (MQ=255) aTTCCCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGc < 2:515444/150‑1 (MQ=255) aTTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTTGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGc < 1:1491760/150‑1 (MQ=255) aTTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGc < 2:1731993/150‑1 (MQ=255) aTTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGc < 2:3308574/150‑1 (MQ=255) aTTACCACGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTTGGGGGTGGTGGTTATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGc < 1:2895960/150‑1 (MQ=255) tttccTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAATCATAAATACAGCTACGGTACGTATATTGATGGTGGCGTGGAGATGTAGTACGGCTCCTTGTTCGGcg > 2:851451/4‑149 (MQ=255) ccTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGa > 1:1154299/1‑150 (MQ=255) cTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAt > 1:1037158/1‑150 (MQ=255) cTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAt > 1:2021340/1‑150 (MQ=255) cTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAt > 1:3708627/1‑150 (MQ=255) cTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCGGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAt > 1:1037096/1‑150 (MQ=255) tCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAtt > 1:841357/1‑150 (MQ=255) tCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAtt > 1:688044/1‑150 (MQ=255) tCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGAtt > 1:3842878/1‑150 (MQ=255) ttctCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGa < 2:1585573/150‑1 (MQ=255) tcCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAgg > 2:3064244/1‑150 (MQ=255) tttCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTGCCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGAcc > 2:2361430/1‑150 (MQ=255) tttCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGAcc > 1:1515709/1‑150 (MQ=255) ttCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCg > 1:3182465/1‑150 (MQ=255) ttCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCg > 1:3182319/1‑150 (MQ=255) ttCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCg > 1:3182275/1‑150 (MQ=255) gTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGc > 2:675561/1‑150 (MQ=255) ttACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGc > 2:475905/1‑150 (MQ=255) tACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATCCAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGcc < 2:1221808/150‑1 (MQ=255) aCGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAGCATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGGGAAGGCTGGACCGTGCAGGCCg < 2:3131697/150‑1 (MQ=255) aCGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCg > 2:3587934/1‑150 (MQ=255) cGGCGAATTAGGGGGGGGTGGATCTAGGGATTTAGAGGGTGAGAATAACCATACATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGa < 1:4025861/150‑1 (MQ=255) ggCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAc > 2:151538/1‑150 (MQ=255) ggCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAc > 2:1939962/1‑150 (MQ=255) gCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc < 1:2714022/150‑1 (MQ=255) gCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc > 1:1861001/1‑150 (MQ=255) gCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc > 1:1799379/1‑150 (MQ=255) gCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc < 1:1342413/150‑1 (MQ=255) gCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc > 2:206208/1‑150 (MQ=255) gCGAATTAGGGGTGGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGAcc < 1:3395860/150‑1 (MQ=255) aTTAGGGGTGGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCacga < 1:1379699/150‑1 (MQ=255) tAGGGGTGGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTGTATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCacgacg < 1:3077851/150‑1 (MQ=255) tAGGGGGGGGGGGATATATGGATTGAGAGGGTGAGAATAAACATAACTACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTAGACCGTGCAGGCCGACCacgacg < 1:2827999/150‑1 (MQ=255) | GCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCACGACGGCAATG > NC_000913/3227823‑3228116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |