New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 404072774 (1.080)3 (0.050) 3/258 NT 5.0% intergenic (+91/+179) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
?NC_000913 = 4171852 46 (0.720)intergenic (+96/‑205) rrfB/murB 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
Rejected: Frequency below/above cutoff threshold.

CGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGAC  >  NC_000913/4040579‑4040875
                                                                                                                                                    |                                                                                                                                                    
cGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGACGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGCCAAATCCGC                                                                                                                                                      >  2:441492‑M1/1‑149 (MQ=255)
   aGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTTTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATACGCCgg                                                                                                                                                   >  2:521370/1‑149 (MQ=21)
           tgttAGTGTGGGGTCTCCTCATGCGAGAGTACGGAACTGCCAGGCATCAAATAAAACGAACGGCTCAGTCGGAAGACGGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAt                                                                                                                                           <  2:800878/146‑1 (MQ=255)
           tGGTAGTGTGGGGTCTCCTCCTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAt                                                                                                                                           <  1:638934/149‑1 (MQ=21)
            ggTAGGGTCGGGTCTCCTCACGCGAGAGTCGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAtt                                                                                                                                          <  1:854389/149‑1 (MQ=255)
            ggTACTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAtt                                                                                                                                          <  1:843866/149‑1 (MQ=21)
             gTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCGGTCGCAAGACTGGGCCGTTCGGTTTATCTGTTGTTTGTCGGTGAACTCTCTCCTGAGTAGGACAAAACCGCCGGGCGCGGAttt                                                                                                                                         >  2:542208/1‑149 (MQ=11)
             gTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                                                                                                                                         <  1:877156/149‑1 (MQ=34)
              tAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTg                                                                                                                                        >  2:290174/1‑149 (MQ=34)
               actggggggGCTCCTCATGCGAGAGGAGGGAACTGCCAGGCATCAAATAACACGACAGGCGCAGGCGGAAGACTGGGCCGTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                                                                                                       <  1:694100/144‑1 (MQ=11)
               aGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCtcccggcggatttgt                                                                                                                                       <  1:1134147‑M1/149‑16 (MQ=255)
               aGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                                                                                                       <  1:717807/149‑1 (MQ=34)
                gtgtGGGGTCTACTCATGAGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAACGGCGCAATCGGAAGACGGGGCCTTACGGTTTATCTGTTGTTTGTCTGTGAAAGCTATACAGAGTAGGACAAAACCGCCGGGAGGGGATATGaa                                                                                                                                      >  2:1183406/1‑149 (MQ=11)
                   tgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGt                                                                                                                                   >  1:189157/1‑149 (MQ=34)
                   tgGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCGCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCtcccggcggatttgtccta                                                                                                                                   <  2:273134‑M1/149‑20 (MQ=255)
                        cctcctcATGCGAGAGGAGGGAACTGCCAGCCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTATTATCTGATGTTTGTCGGTGAACGCGCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGa                                                                                                                              <  2:815908/148‑1 (MQ=11)
                         ctcctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGaa                                                                                                                             <  1:423392/149‑1 (MQ=34)
                         ctcctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGaa                                                                                                                             <  2:85296/149‑1 (MQ=34)
                           cctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAACACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGc                                                                                                                           <  2:324632/149‑1 (MQ=21)
                           cctcATGCGAGAGTAGGGAACTGCCAGGAATCAAATAACACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGc                                                                                                                           <  2:790711/149‑1 (MQ=21)
                            ctcATGCGAGAGTAGGGAACTGCCAGGCATCAAAAAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGGTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCtcccggcggatttgtcctactcaggaga                                                                                                                          <  1:787437‑M1/149‑29 (MQ=255)
                             tcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCaa                                                                                                                         <  2:518409/149‑1 (MQ=32)
                               aTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg                                                                                                                       >  2:751656/1‑149 (MQ=32)
                               aTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACg                                                                                                                       >  2:943187/1‑149 (MQ=32)
                                 gCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTGTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGACCGTTGCGCAGCAACGGc                                                                                                                     >  2:1047242/1‑149 (MQ=12)
                                  cGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGACAGGCTCAGGCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGGCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGcc                                                                                                                    <  1:232691/149‑1 (MQ=12)
                                   gcgcgTAGGGAACTGCCAGGCTTCAATAAACACGAACGGCTCAGGCGGACGACTGGGGCTTTCGTTTTATCTGTCGTTTGTCGGTTTACGCTCTCCTGAGTTGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGccc                                                                                                                   <  2:792235/145‑1 (MQ=11)
                                   gagaGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGccc                                                                                                                   >  2:700351/1‑149 (MQ=32)
                                    cgagTAGGGACCTGCCAGGCATCACATAAACCGAAAGGCTCAGGCGGAAGACTGGGCCTTTCGTTTTATCTGTGGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCg                                                                                                                  <  1:160882/148‑1 (MQ=11)
                                     gagTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCgg                                                                                                                 <  1:39409/149‑1 (MQ=32)
                                     gagTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCgg                                                                                                                 >  2:799410/1‑149 (MQ=32)
                                         cgggACCTGCCAGGAATCAAATAAACCGCCAGGCGCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTAGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAggg                                                                                                             <  2:1021613/148‑1 (MQ=11)
                                         aGGGAACTGCCAGGCATCAAATAAACCGAAAGGATCAGTCGGAAGACTGTGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAggg                                                                                                             <  2:1026307/149‑1 (MQ=12)
                                                 gCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGTGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGc                                                                                                     >  2:295818/1‑149 (MQ=17)
                                                  ccAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa                                                                                                    <  2:509462/149‑1 (MQ=32)
                                                  ccAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa                                                                                                    >  1:874808/1‑149 (MQ=32)
                                                  ccAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa                                                                                                    >  1:876992/1‑149 (MQ=32)
                                                  ccAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa                                                                                                    <  1:943187/149‑1 (MQ=32)
                                                  ccAGGAATCAAATAAAACGAAAGGCTCAGGCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGATCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa                                                                                                    <  2:306878/149‑1 (MQ=12)
                                                    cggCATCAAATAAAACGAAAGGCGCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAgg                                                                                                  <  1:321696/148‑1 (MQ=17)
                                                    agccATCAAATAAAACGACCGGCTCAGGCCGAAGACTGGGCCTTTCGTTTTATCTGTGGTTTGTCGGTGAACGCGCTCCAGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAgg                                                                                                  <  1:283772/146‑1 (MQ=11)
                                                    aGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAgg                                                                                                  <  2:635389/149‑1 (MQ=32)
                                                     gtcATCAATTAAATCGAAAGGCTCTGTCGGAAGTATGGGCCGTTGGTTTTATCTGTTGTTTGCCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGa                                                                                                 <  2:292842/147‑1 (MQ=11)
                                                      gCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTATATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAggcc                                                                                                >  2:946329/1‑147 (MQ=17)
                                                        aTCAAATAAAACGACACGCGCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGGGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgc                                                                                              <  1:395560/149‑1 (MQ=255)
                                                           aaaTAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgcccg                                                                                           >  1:958635/1‑149 (MQ=32)
                                                            actAAACCGAACGGCTCAGTCGGCCGACTGGGCCTTTCGTTTTATCTGTTGTTAGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgcccgc                                                                                          <  1:558158/147‑1 (MQ=11)
                                                            aaTAAAACGACAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACACATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgcccgc                                                                                          <  1:562521/149‑1 (MQ=17)
                                                             aTAAACCGCAAGGCTCAGCCCGACGACGGGGCCCTTGCTTTTATGTGGTGTTGGTCGGCGAACGCTCTCCGGAGTAGGACACATCCGCCGGGAGCGGATATGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgcccgcc                                                                                         <  2:208554/149‑1 (MQ=11)
                                                                   cGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc                                                                                   <  1:460468/149‑1 (MQ=32)
                                                                    gAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACt                                                                                  <  2:400451/149‑1 (MQ=32)
                                                                    gAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTAGTTTGTCGGTGAACGCTCACCTGAGTAGGACAAATCCTCCGCGAGCGGATTTGAAAGTTGCGAAGAAACGGCCAGGAGGGTGGCGGGCAGGACGCCCGCCATAAACt                                                                                  >  1:1083747/1‑149 (MQ=11)
                                                                        ggCGCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGGTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCa                                                                              <  1:153241/149‑1 (MQ=17)
                                                                         gCTCCGGCGGACGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg                                                                             <  1:549745/149‑1 (MQ=12)
                                                                         gCTCAGCCGGAAGACTGGGCCTGTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGACTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg                                                                             <  2:79396/149‑1 (MQ=12)
                                                                           tCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGc                                                                           >  2:1051961/1‑149 (MQ=32)
                                                                           ccAGTCCGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGCGGGGGGCGGGCAGGACGCCCGCCATAAACTGCCAGGc                                                                           <  1:656986/148‑1 (MQ=12)
                                                                              gTCGGAAGACTGGGCCTTTAGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGTATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATc                                                                        <  2:654958/149‑1 (MQ=17)
                                                                               tCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCa                                                                       >  2:435917/1‑149 (MQ=32)
                                                                                 ggAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCaaa                                                                     >  1:272192/1‑149 (MQ=31)
                                                                                 ggAAGACTGGGACTTTCGTTTTATCTGTTGTTTGTCGCTGAACGCGCTCCTGAGTAGGAAAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCaaa                                                                     <  2:911628/149‑1 (MQ=9)
                                                                                                                       tGAACGCTCTCCTGAGTAGGACAAATCAGCCGGGAGCGGATTTGAGCGTTGGGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTTCCAGGCTGCAACTTAAGCAGAAGGCCATCCTGACGGATGGCCTGATTGCa                               >  1:768844/1‑149 (MQ=11)
                                                                                                                        gAACGCTCTCCTGAGTAGGACAAATCCGACGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCAt                              <  2:692351/149‑1 (MQ=14)
                                                                                                                         aaCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCCGATGGCCTTTTTGCagt                             >  2:1177365/1‑147 (MQ=2)
                                                                                                                         aaCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCAtt                             <  1:435917/149‑1 (MQ=32)
                                                                                                                          aCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTg                            >  2:524659/1‑149 (MQ=32)
                                                                                                                            gCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGgc                          <  1:43919/149‑1 (MQ=34)
                                                                                                                              tctcCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGAGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGgcgc                        >  1:451673/1‑149 (MQ=25)
                                                                                                                                tcCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGCTGGCCTTGTTGCATTGGCGCAg                      >  1:121766/1‑149 (MQ=255)
                                                                                                                                    gAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaa                  <  2:63487/149‑1 (MQ=40)
                                                                                                                                       tAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAACCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGaaaaaaa               <  1:757376/149‑1 (MQ=255)
                                                                                                                                        tggACAAATCCGCCGGGTGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCACAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAAt              <  1:459526/148‑1 (MQ=255)
                                                                                                                                          gACAAATCCGCCGGGAGCGTATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGACATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGAGGGCCTTTTTGCATTGGCGCAGAAAAAAATGc            <  1:656389/149‑1 (MQ=255)
                                                                                                                                          gACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGc            >  2:1101318/1‑149 (MQ=255)
                                                                                                                                          gACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGc            >  1:1074962/1‑149 (MQ=255)
                                                                                                                                          gACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGc            <  1:700351/149‑1 (MQ=255)
                                                                                                                                            cAAATCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggcagttccctactctcgcatggggagaccccacacta          <  2:81916‑M1/149‑141 (MQ=255)
                                                                                                                                             aaaTCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCgg         >  2:467596/1‑149 (MQ=255)
                                                                                                                                             aaaTCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCgg         >  2:287312/1‑149 (MQ=255)
                                                                                                                                             aaaTCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCAAGGCATCAAATTAAGCAGAAGGCCATCCTGACCGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCgg         >  1:629739/1‑149 (MQ=255)
                                                                                                                                              aaTCCGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggcagttccctactctcgcatggggagaccccacactacc        >  1:1107906‑M1/1‑7 (MQ=255)
                                                                                                                                                tCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATg      <  1:1051961/149‑1 (MQ=255)
                                                                                                                                                 ccGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggcagttccctactctcgcatggggagaccccacactaccatc     <  1:461224‑M1/149‑146 (MQ=255)
                                                                                                                                                 ccGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggaagttccctactctcgcctggggagacacccccctaccctg     >  2:79261‑M1/1‑4 (MQ=255)
                                                                                                                                                  cgccgGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTACGCAGAAGGCCATCCTGACGGATGGCCTGTTTGCATTGGCGCAGAAAAAAATGCCGGATGCg    >  2:1122421/1‑149 (MQ=255)
                                                                                                                                                  cgccgGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCg    <  1:1146988/149‑1 (MQ=255)
                                                                                                                                                  cGCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagccgttcgttttatttgatgcctggcagatccctactctcgcatggggagacacaacactaccatcg    >  1:1167803‑M1/1‑3 (MQ=255)
                                                                                                                                                   gccgGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGa   >  1:194705/1‑149 (MQ=255)
                                                                                                                                                   gCtcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtcgttcgactgagcctttcgttttatttgatgcctggcagttccctactctcgcatggggagaccccacactaccatcgg   >  2:132936‑M1/1‑2 (MQ=255)
                                                                                                                                                   gCtcccggcggatttgtcctactcaggagagcgttcaccgaaaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcggtttatttgatgcctggcagttccctactctcgcatggggagaccccacactaccctcgg   >  2:1003563‑M1/1‑2 (MQ=255)
                                                                                                                                                    ctcccggcggatttgtcctactcaggagagcgttcaccgacaaacaacagataaaacgaaaggcccagtctttcgactgagcctttcgttttatttgatgcctggcaattccctactctcgcatggggagaccccacactaccatcggc  <  1:934733‑M1/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCATTGGCGCAGAAAAAAATGCCGGATGCGAC  >  NC_000913/4040579‑4040875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.